RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 MCM9Q9NXL9 1143 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 GABPB1Q06547 395 aaPredicted RBP17.28■□□□□ 0.36
PTBP1-203ENST00000356948 KRT31Q15323 416 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 E2F4Q16254 413 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 SPATA1Q5VX52 437 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 CHP1Q99653 195 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 MRFAP1Q9Y605 127 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 ADGRG1Q9Y653 693 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 TSPY2A6NKD2 308 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 ZSCAN12O43309 604 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 ZRANB2O95218 330 aaKnown RBP eCLIP17.28■□□□□ 0.365e-7■■■■□ 22.3
PTBP1-203ENST00000356948 PARP10Q53GL7 1025 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 HINFPQ9BQA5 517 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 PARD6BQ9BYG5 372 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 ARAP2Q8WZ64 1704 aa17.27■□□□□ 0.36
PTBP1-203ENST00000356948 HPS3Q969F9 1004 aa17.27■□□□□ 0.36
PTBP1-203ENST00000356948 SAP30BPQ9UHR5 308 aaKnown RBP17.27■□□□□ 0.36
PTBP1-203ENST00000356948 CDKAL1Q5VV42 579 aa17.27■□□□□ 0.35
PTBP1-203ENST00000356948 CEP131Q9UPN4 1083 aa17.27■□□□□ 0.35
PTBP1-203ENST00000356948 SPATA31A1Q5TZJ5 1347 aa17.27■□□□□ 0.35
PTBP1-203ENST00000356948 ZNF569Q5MCW4 686 aa17.27■□□□□ 0.35
PTBP1-203ENST00000356948 PDXDC2PQ6P474 469 aa17.27■□□□□ 0.35
PTBP1-203ENST00000356948 UIMC1Q96RL1 719 aa17.27■□□□□ 0.35
PTBP1-203ENST00000356948 BSDC1Q9NW68 430 aaPredicted RBP17.27■□□□□ 0.35
PTBP1-203ENST00000356948 DUOX1Q9NRD9 1551 aa17.26■□□□□ 0.35
PTBP1-203ENST00000356948 PBX1P40424 430 aa17.26■□□□□ 0.35
PTBP1-203ENST00000356948 ST5P78524 1137 aa17.26■□□□□ 0.35
PTBP1-203ENST00000356948 TFAP4Q01664 338 aa17.26■□□□□ 0.35
PTBP1-203ENST00000356948 FAM98CQ17RN3 349 aaKnown RBP17.26■□□□□ 0.35
PTBP1-203ENST00000356948 RNF216Q9NWF9 866 aaPredicted RBP17.26■□□□□ 0.35
PTBP1-203ENST00000356948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■□□□ 13.4
PTBP1-203ENST00000356948 PES1O00541 588 aaKnown RBP17.26■□□□□ 0.35
PTBP1-203ENST00000356948 PRCPP42785 496 aa17.26■□□□□ 0.35
PTBP1-203ENST00000356948 ATP2C1P98194 919 aaPredicted RBP17.26■□□□□ 0.35
PTBP1-203ENST00000356948 RTL9Q8NET4 1388 aa17.26■□□□□ 0.35
PTBP1-203ENST00000356948 TBC1D8O95759 1140 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 SCG2P13521 617 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 KLK7P49862 253 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 DHX8Q14562 1220 aaKnown RBP17.25■□□□□ 0.35
PTBP1-203ENST00000356948 AK7Q96M32 723 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 CYTH3O43739 400 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 CTCFLQ8NI51 663 aaPredicted RBP17.25■□□□□ 0.35
PTBP1-203ENST00000356948 SLF1Q9BQI6 1058 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 N4BP3O15049 544 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 ERCC5P28715 1186 aaPredicted RBP17.25■□□□□ 0.35
PTBP1-203ENST00000356948 INF2Q27J81 1249 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 TMCO3Q6UWJ1 677 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 PPFIBP1Q86W92 1011 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 GPATCH11Q8N954 259 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 GNL3LQ9NVN8 582 aaKnown RBP17.25■□□□□ 0.35
PTBP1-203ENST00000356948 MYH8P13535 1937 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 PHLPP1O60346 1717 aa17.25■□□□□ 0.35
PTBP1-203ENST00000356948 MFAP3LO75121 409 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 XBP1P17861 261 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 SH3RF3Q8TEJ3 882 aaPredicted RBP17.24■□□□□ 0.35
PTBP1-203ENST00000356948 HNRNPH2P55795 449 aaKnown RBP17.24■□□□□ 0.35
PTBP1-203ENST00000356948 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 FBXO33Q7Z6M2 555 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 IRF2BP1Q8IU81 584 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 SLC35F6Q8N357 371 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 NELFBQ8WX92 580 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 RSPH14Q9UHP6 348 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 ENC1O14682 589 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
PTBP1-203ENST00000356948 NFIXQ14938 502 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 NAALADL2Q58DX5 795 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 PNKPQ96T60 521 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 PLCH1Q4KWH8 1693 aa17.24■□□□□ 0.35
PTBP1-203ENST00000356948 EFCAB8A8MWE9 144 aa17.23■□□□□ 0.35
PTBP1-203ENST00000356948 SLURP2P0DP57 97 aa17.23■□□□□ 0.35
PTBP1-203ENST00000356948 HIBADHP31937 336 aaKnown RBP17.23■□□□□ 0.35
PTBP1-203ENST00000356948 CC2D1AQ6P1N0 951 aaPredicted RBP17.23■□□□□ 0.35
PTBP1-203ENST00000356948 C4orf32Q8N8J7 132 aa17.23■□□□□ 0.35
PTBP1-203ENST00000356948 DACH1Q9UI36 760 aa17.23■□□□□ 0.35
PTBP1-203ENST00000356948 CCDC175P0C221 793 aa17.23■□□□□ 0.35
PTBP1-203ENST00000356948 RHOXF2BP0C7M4 288 aa17.23■□□□□ 0.35
PTBP1-203ENST00000356948 BMS1Q14692 1282 aaKnown RBP17.23■□□□□ 0.35
PTBP1-203ENST00000356948 TRIML1Q8N9V2 468 aa17.23■□□□□ 0.35
PTBP1-203ENST00000356948 RHOXF2Q9BQY4 288 aa17.23■□□□□ 0.35
PTBP1-203ENST00000356948 HDAC6Q9UBN7 1215 aa17.23■□□□□ 0.35
PTBP1-203ENST00000356948 RSRC2Q7L4I2 434 aaKnown RBP17.23■□□□□ 0.35
PTBP1-203ENST00000356948 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
PTBP1-203ENST00000356948 NUP88Q99567 741 aaPredicted RBP17.22■□□□□ 0.35
PTBP1-203ENST00000356948 VAT1LQ9HCJ6 419 aa17.22■□□□□ 0.35
PTBP1-203ENST00000356948 PFKFB3Q16875 520 aaPredicted RBP17.22■□□□□ 0.35
PTBP1-203ENST00000356948 KANK3Q6NY19 840 aa17.22■□□□□ 0.35
PTBP1-203ENST00000356948 HEATR3Q7Z4Q2 680 aa17.22■□□□□ 0.35
PTBP1-203ENST00000356948 ELOA2Q8IYF1 753 aaPredicted RBP17.22■□□□□ 0.35
PTBP1-203ENST00000356948 SF3B3Q15393 1217 aaKnown RBP17.22■□□□□ 0.35
PTBP1-203ENST00000356948 NCAPH2Q6IBW4 605 aa17.22■□□□□ 0.35
PTBP1-203ENST00000356948 MAPKAPK5Q8IW41 473 aa17.22■□□□□ 0.35
PTBP1-203ENST00000356948 RGS22Q8NE09 1264 aa17.22■□□□□ 0.35
PTBP1-203ENST00000356948 TGFBRAP1Q8WUH2 860 aa17.22■□□□□ 0.35
PTBP1-203ENST00000356948 GSDMAQ96QA5 445 aa17.22■□□□□ 0.35
PTBP1-203ENST00000356948 COL16A1Q07092 1604 aaPredicted RBP17.22■□□□□ 0.35
PTBP1-203ENST00000356948 FGRP09769 529 aa17.21■□□□□ 0.35
PTBP1-203ENST00000356948 PNMA1Q8ND90 353 aa17.21■□□□□ 0.35
PTBP1-203ENST00000356948 RASSF8Q8NHQ8 419 aa17.21■□□□□ 0.35
PTBP1-203ENST00000356948 REXO2Q9Y3B8 237 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms