RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 LONRF3Q496Y0 759 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 SLC44A5Q8NCS7 719 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 CHURC1Q8WUH1 139 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 PGBD1Q96JS3 809 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 FAM84BQ96KN1 310 aaPredicted RBP15.69■□□□□ 0.1
ATN1-201ENST00000356654 CSRNP1Q96S65 589 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 CCDC113Q9H0I3 377 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 MCM6Q14566 821 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 USP37Q86T82 979 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 SH3RF3Q8TEJ3 882 aaPredicted RBP15.69■□□□□ 0.1
ATN1-201ENST00000356654 TMOD4Q9NZQ9 345 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 GSTTP1A0A1W2PQM5 241 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 DESP17661 470 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 ITPK1Q13572 414 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 TPH2Q8IWU9 490 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 CD209Q9NNX6 404 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 PCDHB6Q9Y5E3 794 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 TAF6LQ9Y6J9 622 aa15.69■□□□□ 0.1
ATN1-201ENST00000356654 HARSP12081 509 aaKnown RBP15.68■□□□□ 0.1
ATN1-201ENST00000356654 PPP1R2P41236 205 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 RFX5P48382 616 aaPredicted RBP15.68■□□□□ 0.1
ATN1-201ENST00000356654 COA7Q96BR5 231 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 CPVLQ9H3G5 476 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 GSG1L2A8MUP6 293 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 RBM6P78332 1123 aaKnown RBP15.68■□□□□ 0.1
ATN1-201ENST00000356654 FBXO11Q86XK2 927 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 RGS22Q8NE09 1264 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 PIGSQ96S52 555 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 H7C1D1 291 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 NMT2O60551 498 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 MCM3P25205 808 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 C11orf57Q6ZUT1 292 aaPredicted RBP15.68■□□□□ 0.1
ATN1-201ENST00000356654 TMC4Q7Z404 712 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 ZNF34Q8IZ26 560 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 NRBP1Q9UHY1 535 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 ALAS1P13196 640 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 SEPT7Q16181 437 aaKnown RBP15.68■□□□□ 0.1
ATN1-201ENST00000356654 PTPN21Q16825 1174 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 CCDC17Q96LX7 622 aa15.68■□□□□ 0.1
ATN1-201ENST00000356654 BCCIPQ9P287 314 aaKnown RBP eCLIP15.68■□□□□ 0.1
ATN1-201ENST00000356654 CDK8P49336 464 aa15.67■□□□□ 0.1
ATN1-201ENST00000356654 MB21D2Q8IYB1 491 aaPredicted RBP15.67■□□□□ 0.1
ATN1-201ENST00000356654 ARFGAP3Q9NP61 516 aa15.67■□□□□ 0.1
ATN1-201ENST00000356654 CSF1RP07333 972 aa15.67■□□□□ 0.1
ATN1-201ENST00000356654 IFFO1Q0D2I5 559 aa15.67■□□□□ 0.1
ATN1-201ENST00000356654 BMS1Q14692 1282 aaKnown RBP15.67■□□□□ 0.1
ATN1-201ENST00000356654 IFI16Q16666 785 aaKnown RBP15.67■□□□□ 0.1
ATN1-201ENST00000356654 SPECC1LQ69YQ0 1117 aa15.67■□□□□ 0.1
ATN1-201ENST00000356654 MYCT1Q8N699 235 aa15.67■□□□□ 0.1
ATN1-201ENST00000356654 OVOS2A0A0G2JMS6 1433 aa15.67■□□□□ 0.1
ATN1-201ENST00000356654 SPATA31A1Q5TZJ5 1347 aa15.67■□□□□ 0.1
ATN1-201ENST00000356654 ZBED4O75132 1171 aa15.67■□□□□ 0.1
ATN1-201ENST00000356654 IMPACTQ9P2X3 320 aa15.67■□□□□ 0.1
ATN1-201ENST00000356654 CAMTA2O94983 1202 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 RHOXF2BP0C7M4 288 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 SMYD4Q8IYR2 804 aaPredicted RBP15.66■□□□□ 0.1
ATN1-201ENST00000356654 RHOXF2Q9BQY4 288 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 BRIP1Q9BX63 1249 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 DCP1AQ9NPI6 582 aaPredicted RBP15.66■□□□□ 0.1
ATN1-201ENST00000356654 FRMD4BQ9Y2L6 1034 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 POTEB2H3BUK9 544 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 RIOK3O14730 519 aaKnown RBP15.66■□□□□ 0.1
ATN1-201ENST00000356654 PPP6R2O75170 966 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 NPR1P16066 1061 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 STAG1Q8WVM7 1258 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 FAM207AQ9NSI2 230 aaPredicted RBP15.66■□□□□ 0.1
ATN1-201ENST00000356654 B4DLN1 442 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 TTLL1O95922 423 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 EPB41P11171 864 aaKnown RBP15.66■□□□□ 0.1
ATN1-201ENST00000356654 CTNNA2P26232 953 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 CYP4A11Q02928 519 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 PLA2G12BQ9BX93 195 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
ATN1-201ENST00000356654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.66■□□□□ 0.1
ATN1-201ENST00000356654 TUBB4AP04350 444 aa15.66■□□□□ 0.1
ATN1-201ENST00000356654 USP42Q9H9J4 1324 aaKnown RBP15.65■□□□□ 0.1
ATN1-201ENST00000356654 ARHGAP6O43182 974 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 C21orf2O43822 256 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 GAS7O60861 476 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 GCNT3O95395 438 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 CDC27P30260 824 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 CKAP4Q07065 602 aaKnown RBP15.65■□□□□ 0.1
ATN1-201ENST00000356654 TXNRD1Q16881 649 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 CC2D2BQ6DHV5 1058 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 RDH13Q8NBN7 331 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 SLF1Q9BQI6 1058 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 SLC39A2Q9NP94 309 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 PRPF3O43395 683 aaKnown RBP15.65■□□□□ 0.1
ATN1-201ENST00000356654 GALNT17Q6IS24 598 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 COA1Q9GZY4 146 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 NLRC4Q9NPP4 1024 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 PCDHA4Q9UN74 947 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 FAM170AA1A519 330 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 TMEM110-MUSTN1A8MSY1 372 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 TNFAIP1Q13829 316 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 EPSTI1Q96J88 318 aa15.65■□□□□ 0.1
ATN1-201ENST00000356654 MRPL44Q9H9J2 332 aaKnown RBP15.65■□□□□ 0.1
ATN1-201ENST00000356654 NKX1-1Q15270 411 aaPredicted RBP15.64■□□□□ 0.09
ATN1-201ENST00000356654 GPATCH4Q5T3I0 446 aaKnown RBP15.64■□□□□ 0.09
ATN1-201ENST00000356654 GPBP1Q86WP2 473 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms