RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 CCDC88AQ3V6T2 1871 aa15.93■□□□□ 0.14
LSS-201ENST00000356396 U2AF2P26368 475 aaKnown RBP eCLIP15.93■□□□□ 0.142e-6■□□□□ 9.5
LSS-201ENST00000356396 LMOD1P29536 600 aaPredicted RBP15.93■□□□□ 0.14
LSS-201ENST00000356396 KRT2P35908 639 aa15.93■□□□□ 0.14
LSS-201ENST00000356396 NAPAP54920 295 aa15.93■□□□□ 0.14
LSS-201ENST00000356396 ADALQ6DHV7 355 aa15.93■□□□□ 0.14
LSS-201ENST00000356396 TMTC2Q8N394 836 aa15.93■□□□□ 0.14
LSS-201ENST00000356396 ACER1Q8TDN7 264 aa15.93■□□□□ 0.14
LSS-201ENST00000356396 GAKO14976 1311 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 CCDC196A0A1B0GTZ2 297 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 PEX10O60683 326 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 EEF2P13639 858 aaKnown RBP15.92■□□□□ 0.14
LSS-201ENST00000356396 IL17AQ16552 155 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 PODNQ7Z5L7 613 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 USP17L15C9J2P7 530 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 USP17L13C9JLJ4 530 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 USP17L11C9JVI0 530 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 USP17L18D6R9N7 530 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 USP17L22D6RA61 530 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 USP17L17D6RBQ6 530 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 USP17L19D6RCP7 530 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 USP17L20D6RJB6 530 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 FGRP09769 529 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 ATP1A3P13637 1013 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 CXCL9Q07325 125 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 USP17L24Q0WX57 530 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 USP17L6PQ6QN14 398 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 PHF20Q9BVI0 1012 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 TRIM5Q9C035 493 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 POLR3EQ9NVU0 708 aa15.92■□□□□ 0.14
LSS-201ENST00000356396 ZNF831Q5JPB2 1677 aa15.91■□□□□ 0.14
LSS-201ENST00000356396 KIAA1755Q5JYT7 1200 aa15.91■□□□□ 0.14
LSS-201ENST00000356396 RNF26Q9BY78 433 aaPredicted RBP15.91■□□□□ 0.14
LSS-201ENST00000356396 MTMR4Q9NYA4 1195 aa15.91■□□□□ 0.14
LSS-201ENST00000356396 ESPNB1AK53 854 aa15.91■□□□□ 0.14
LSS-201ENST00000356396 PARP1P09874 1014 aaKnown RBP15.91■□□□□ 0.14
LSS-201ENST00000356396 KIAA2012Q0VF49 1180 aa15.91■□□□□ 0.14
LSS-201ENST00000356396 FILIP1Q7Z7B0 1213 aa15.91■□□□□ 0.14
LSS-201ENST00000356396 TRIM34Q9BYJ4 488 aa15.91■□□□□ 0.14
LSS-201ENST00000356396 WDR19Q8NEZ3 1342 aa15.91■□□□□ 0.14
LSS-201ENST00000356396 A0A1W2PRG0 241 aa15.9■□□□□ 0.14
LSS-201ENST00000356396 PPP1R11O60927 126 aaPredicted RBP15.9■□□□□ 0.14
LSS-201ENST00000356396 PDHBP11177 359 aa15.9■□□□□ 0.14
LSS-201ENST00000356396 BRAPQ7Z569 592 aa15.9■□□□□ 0.14
LSS-201ENST00000356396 METTL16Q86W50 562 aaKnown RBP15.9■□□□□ 0.14
LSS-201ENST00000356396 CNNM3Q8NE01 707 aa15.9■□□□□ 0.14
LSS-201ENST00000356396 FBXO41Q8TF61 875 aa15.9■□□□□ 0.14
LSS-201ENST00000356396 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.9■□□□□ 0.14
LSS-201ENST00000356396 KCNH3Q9ULD8 1083 aa15.9■□□□□ 0.14
LSS-201ENST00000356396 PRPF3O43395 683 aaKnown RBP15.9■□□□□ 0.14
LSS-201ENST00000356396 CERKLQ49MI3 558 aaPredicted RBP15.9■□□□□ 0.14
LSS-201ENST00000356396 SYMPKQ92797 1274 aaKnown RBP15.9■□□□□ 0.14
LSS-201ENST00000356396 TULP1O00294 542 aaPredicted RBP15.9■□□□□ 0.14
LSS-201ENST00000356396 PCDHA5Q9Y5H7 936 aa15.9■□□□□ 0.14
LSS-201ENST00000356396 SMCO2A6NFE2 343 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 KARSQ15046 597 aaKnown RBP15.89■□□□□ 0.13
LSS-201ENST00000356396 C15orf52Q6ZUT6 534 aaKnown RBP15.89■□□□□ 0.13
LSS-201ENST00000356396 RASSF8Q8NHQ8 419 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 KCNG4Q8TDN1 519 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 HPS3Q969F9 1004 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 DDX19AQ9NUU7 478 aaKnown RBP15.89■□□□□ 0.13
LSS-201ENST00000356396 FBXO28Q9NVF7 368 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 FBXO2Q9UK22 296 aaPredicted RBP15.89■□□□□ 0.13
LSS-201ENST00000356396 BMP6P22004 513 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 PTGS1P23219 599 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 HOXA13P31271 388 aaPredicted RBP15.89■□□□□ 0.13
LSS-201ENST00000356396 TTC38Q5R3I4 469 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 STRIP1Q5VSL9 837 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 NEDD1Q8NHV4 660 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 TBC1D5Q92609 795 aa15.89■□□□□ 0.13
LSS-201ENST00000356396 BECN2A8MW95 431 aa15.88■□□□□ 0.13
LSS-201ENST00000356396 TNNI2P48788 182 aa15.88■□□□□ 0.13
LSS-201ENST00000356396 PFKFB3Q16875 520 aaPredicted RBP15.88■□□□□ 0.13
LSS-201ENST00000356396 MYH6P13533 1939 aa15.88■□□□□ 0.13
LSS-201ENST00000356396 TRIM75PA6NK02 468 aa15.88■□□□□ 0.13
LSS-201ENST00000356396 RAD51AP2Q09MP3 1159 aa15.88■□□□□ 0.13
LSS-201ENST00000356396 SIAH1Q8IUQ4 282 aa15.88■□□□□ 0.13
LSS-201ENST00000356396 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
LSS-201ENST00000356396 ECM29Q5VYK3 1845 aa15.88■□□□□ 0.13
LSS-201ENST00000356396 RGL2O15211 777 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 CCNT1O60563 726 aaKnown RBP15.87■□□□□ 0.13
LSS-201ENST00000356396 GABPAQ06546 454 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 STYK1Q6J9G0 422 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 ADGRF4Q8IZF3 695 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 KRI1Q8N9T8 703 aaKnown RBP15.87■□□□□ 0.13
LSS-201ENST00000356396 DDX60LQ5H9U9 1706 aaKnown RBP15.87■□□□□ 0.13
LSS-201ENST00000356396 MYH1P12882 1939 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 NFKBIEO00221 500 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 CCDC173Q0VFZ6 552 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 DLGAP5Q15398 846 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 DGKHQ86XP1 1220 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 BLIDQ8IZY5 108 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 LRRC15Q8TF66 581 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 DDAH1O94760 285 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 TDP2O95551 362 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 CCDC144BQ3MJ40 725 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 CCDC93Q567U6 631 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 FAM200AQ8TCP9 573 aa15.87■□□□□ 0.13
LSS-201ENST00000356396 CCDC194A0A1B0GVG4 234 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 FAM170AA1A519 330 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms