RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ZNF444Q8N0Y2 327 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-204ENST00000356316 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
CAPN3-204ENST00000356316 ARRDC4Q8NCT1 418 aa12.75□□□□□ -0.37
CAPN3-204ENST00000356316 NPLOC4Q8TAT6 608 aa12.75□□□□□ -0.37
CAPN3-204ENST00000356316 APPBP2Q92624 585 aa12.75□□□□□ -0.37
CAPN3-204ENST00000356316 SENP6Q9GZR1 1112 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-204ENST00000356316 PRO3102Q9H379 93 aa12.75□□□□□ -0.37
CAPN3-204ENST00000356316 RANBP2P49792 3224 aaKnown RBP12.75□□□□□ -0.37
CAPN3-204ENST00000356316 SYN1P17600 705 aa12.74□□□□□ -0.37
CAPN3-204ENST00000356316 BMP8BP34820 402 aa12.74□□□□□ -0.37
CAPN3-204ENST00000356316 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
CAPN3-204ENST00000356316 OLFML2BQ68BL8 750 aa12.74□□□□□ -0.37
CAPN3-204ENST00000356316 ABRAQ8N0Z2 381 aa12.74□□□□□ -0.37
CAPN3-204ENST00000356316 ATG4CQ96DT6 458 aa12.74□□□□□ -0.37
CAPN3-204ENST00000356316 NACAP1Q9BZK3 213 aa12.74□□□□□ -0.37
CAPN3-204ENST00000356316 CTDP1Q9Y5B0 961 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-204ENST00000356316 ALPK3Q96L96 1907 aa12.74□□□□□ -0.37
CAPN3-204ENST00000356316 TTC41PQ6P2S7 1318 aa12.73□□□□□ -0.37
CAPN3-204ENST00000356316 GSG1L2A8MUP6 293 aa12.73□□□□□ -0.37
CAPN3-204ENST00000356316 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
CAPN3-204ENST00000356316 SMIM22K7EJ46 135 aa12.73□□□□□ -0.37
CAPN3-204ENST00000356316 GPAA1O43292 621 aa12.73□□□□□ -0.37
CAPN3-204ENST00000356316 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
CAPN3-204ENST00000356316 COL6A1P12109 1028 aa12.73□□□□□ -0.37
CAPN3-204ENST00000356316 KCTD2Q14681 263 aa12.73□□□□□ -0.37
CAPN3-204ENST00000356316 TSHZ3Q63HK5 1081 aa12.73□□□□□ -0.37
CAPN3-204ENST00000356316 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
CAPN3-204ENST00000356316 MMP19Q99542 508 aa12.73□□□□□ -0.37
CAPN3-204ENST00000356316 ZNFX1Q9P2E3 1918 aaKnown RBP12.72□□□□□ -0.37
CAPN3-204ENST00000356316 PFASO15067 1338 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 SZT2Q5T011 3432 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 DNM1LO00429 736 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 VWA5AO00534 786 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 COPB2P35606 906 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 STAT3P40763 770 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 TMEM132BQ14DG7 1078 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 FAM83BQ5T0W9 1011 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 GDF15Q99988 308 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 LBHD1Q9BQE6 289 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-204ENST00000356316 UBE2OQ9C0C9 1292 aaKnown RBP12.72□□□□□ -0.37
CAPN3-204ENST00000356316 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 RLFQ13129 1914 aa12.72□□□□□ -0.37
CAPN3-204ENST00000356316 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 F5H6K3 240 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 SEPT4O43236 478 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 COBLO75128 1261 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 RASA1P20936 1047 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 MAGEA10P43363 369 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-204ENST00000356316 PDE4BQ07343 736 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 KLRC3Q07444 240 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 LRRC26Q2I0M4 334 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 RIOX2Q8IUF8 465 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 PRPF38AQ8NAV1 312 aaKnown RBP12.71□□□□□ -0.37
CAPN3-204ENST00000356316 MAML3Q96JK9 1138 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 FSD1Q9BTV5 496 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 FBXO28Q9NVF7 368 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 NYAP2Q9P242 653 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 PPP1R9AQ9ULJ8 1098 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 PCDHB15Q9Y5E8 787 aa12.71□□□□□ -0.37
CAPN3-204ENST00000356316 TRIOBPQ9H2D6 2365 aa12.71□□□□□ -0.38
CAPN3-204ENST00000356316 COL11A1P12107 1806 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-204ENST00000356316 FRMPD3Q5JV73 1810 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 ZNF236Q9UL36 1845 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 ZBED4O75132 1171 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 CYBAP13498 195 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 ATN1P54259 1190 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-204ENST00000356316 PRAMEF19Q5SWL8 479 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 GJC2Q5T442 439 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-204ENST00000356316 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 IFNL3Q8IZI9 196 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 TRPV1Q8NER1 839 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 SLF1Q9BQI6 1058 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.7□□□□□ -0.38
CAPN3-204ENST00000356316 A0A0G2JMZ2 1700 aa12.7□□□□□ -0.38
CAPN3-204ENST00000356316 PARP14Q460N5 1801 aa12.69□□□□□ -0.38
CAPN3-204ENST00000356316 M0R2C6 588 aa12.69□□□□□ -0.38
CAPN3-204ENST00000356316 TSPY3P0CV98 308 aa12.69□□□□□ -0.38
CAPN3-204ENST00000356316 TSPY8P0CW00 308 aa12.69□□□□□ -0.38
CAPN3-204ENST00000356316 MX1P20591 662 aa12.69□□□□□ -0.38
CAPN3-204ENST00000356316 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
CAPN3-204ENST00000356316 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
CAPN3-204ENST00000356316 NUP88Q99567 741 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-204ENST00000356316 TINF2Q9BSI4 451 aa12.69□□□□□ -0.38
CAPN3-204ENST00000356316 TEX13BQ9BXU2 312 aa12.69□□□□□ -0.38
CAPN3-204ENST00000356316 NAPBQ9H115 298 aa12.69□□□□□ -0.38
CAPN3-204ENST00000356316 DIS3Q9Y2L1 958 aaKnown RBP12.69□□□□□ -0.38
CAPN3-204ENST00000356316 PRDM1O75626 825 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 TTLL1O95922 423 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 NDUFB10O96000 172 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 IGHA2P01877 340 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 PGK2P07205 417 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 RARBP10826 455 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-204ENST00000356316 SNRNP48Q6IEG0 339 aaKnown RBP12.68□□□□□ -0.38
CAPN3-204ENST00000356316 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms