RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 MMP10P09238 476 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 GYG1P46976 350 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 KIAA1841Q6NSI8 718 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 METTL23Q86XA0 190 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 RNF169Q8NCN4 708 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 TLR3O15455 904 aaKnown RBP12.49□□□□□ -0.41
FN1-204ENST00000356005 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 RNASELQ05823 741 aaKnown RBP12.49□□□□□ -0.41
FN1-204ENST00000356005 FAM102BQ5T8I3 360 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 PLIN2Q99541 437 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 AMNQ9BXJ7 453 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 ATP8B3O60423 1300 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 ZNF335Q9H4Z2 1342 aaPredicted RBP12.49□□□□□ -0.41
FN1-204ENST00000356005 PLCB4Q15147 1175 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 DDX25Q9UHL0 483 aaKnown RBP12.49□□□□□ -0.41
FN1-204ENST00000356005 HEG1Q9ULI3 1381 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 SLFN13Q68D06 897 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 PNMA1Q8ND90 353 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 FAM81BQ96LP2 452 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 FEZ2Q9UHY8 353 aaPredicted RBP12.49□□□□□ -0.41
FN1-204ENST00000356005 BCAMP50895 628 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 RASA3Q14644 834 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 GEN1Q17RS7 908 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 CFAP157Q5JU67 520 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 CCDC84Q86UT8 332 aaPredicted RBP12.48□□□□□ -0.41
FN1-204ENST00000356005 TRIM7Q9C029 511 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 TBC1D8BQ0IIM8 1120 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 DAAM2Q86T65 1068 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 ZNF654Q8IZM8 581 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 SPON1Q9HCB6 807 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 CTNND2Q9UQB3 1225 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 SLC9C1Q4G0N8 1177 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 SYCE1Q8N0S2 351 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 C16orf45Q96MC5 204 aaPredicted RBP12.48□□□□□ -0.41
FN1-204ENST00000356005 DNAJC5Q9H3Z4 198 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 SPATA31A3Q5VYP0 1347 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 ASNSP08243 561 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 ITIH3Q06033 890 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 TAOK1Q7L7X3 1001 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 PAIP2Q9BPZ3 127 aaKnown RBP12.48□□□□□ -0.41
FN1-204ENST00000356005 CTAGE15A4D2H0 777 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 OPA1O60313 960 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 CTAGE8P0CG41 777 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 CTAGE6Q86UF2 777 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 CTAGE4Q8IX94 777 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 IFNL3Q8IZI9 196 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 MAIP1Q8WWC4 291 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 SERPINB13Q9UIV8 391 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 KCNH3Q9ULD8 1083 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.48□□□□□ -0.41
FN1-204ENST00000356005 KLRF2D3W0D1 207 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 ZNF569Q5MCW4 686 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 CSGALNACT2Q8N6G5 542 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 AKT3Q9Y243 479 aa12.48□□□□□ -0.41
FN1-204ENST00000356005 PAK1Q13153 545 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
FN1-204ENST00000356005 ZNF233A6NK53 670 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 USP17L8P0C7I0 530 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 FAM160B2Q86V87 743 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 SPATA24Q86W54 205 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 LARSQ9P2J5 1176 aaKnown RBP12.47□□□□□ -0.41
FN1-204ENST00000356005 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 GOLGA8CPA6NN73 597 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 FMNL1O95466 1100 aaPredicted RBP12.47□□□□□ -0.41
FN1-204ENST00000356005 XKR9Q5GH70 373 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 SYNRGQ9UMZ2 1314 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 HMGB1P1B2RPK0 211 aaPredicted RBP12.47□□□□□ -0.41
FN1-204ENST00000356005 PRDM1O75626 825 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 COPB2P35606 906 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 TNS3Q68CZ2 1445 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 ACTN4O43707 911 aaKnown RBP12.47□□□□□ -0.41
FN1-204ENST00000356005 RAD17O75943 681 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 GRAPQ13588 217 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 GRAPLQ8TC17 118 aaPredicted RBP12.47□□□□□ -0.41
FN1-204ENST00000356005 ANO3Q9BYT9 981 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 SOS2Q07890 1332 aaPredicted RBP12.47□□□□□ -0.41
FN1-204ENST00000356005 LAD1O00515 517 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 MYL5Q02045 173 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 CCDC129Q6ZRS4 1044 aa12.47□□□□□ -0.41
FN1-204ENST00000356005 ERBB3P21860 1342 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 FRMPD2Q68DX3 1309 aaPredicted RBP12.46□□□□□ -0.41
FN1-204ENST00000356005 ZBTB16Q05516 673 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 TYRO3Q06418 890 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 POSTNQ15063 836 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 CABP7Q86V35 215 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 GJD4Q96KN9 370 aaPredicted RBP12.46□□□□□ -0.41
FN1-204ENST00000356005 METP08581 1390 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 CD19P15391 556 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 SARNPP82979 210 aaKnown RBP12.46□□□□□ -0.41
FN1-204ENST00000356005 FAM160A1Q05DH4 1040 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 UBE3CQ15386 1083 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 MLKLQ8NB16 471 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 HESX1Q9UBX0 185 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 SLC8A2Q9UPR5 921 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 AKR1B15C9JRZ8 316 aaPredicted RBP12.46□□□□□ -0.41
FN1-204ENST00000356005 PDE6AP16499 860 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 FNBP4Q8N3X1 1017 aaPredicted RBP12.46□□□□□ -0.41
FN1-204ENST00000356005 SMC6Q96SB8 1091 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 hCG_1984214I3L0E3 225 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms