RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 DCAF15Q66K64 600 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 ATAD5Q96QE3 1844 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 CPVLQ9H3G5 476 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 GPCPD1Q9NPB8 672 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 TFIP11Q9UBB9 837 aaKnown RBP15.73■□□□□ 0.11
HOXA1-202ENST00000355633 SYNPO2Q9UMS6 1093 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 SRCAPQ6ZRS2 3230 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 SOCS7O14512 581 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 ASNSP08243 561 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 SLFN13Q68D06 897 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 DIS3L2Q8IYB7 885 aaKnown RBP15.73■□□□□ 0.11
HOXA1-202ENST00000355633 GMCL1P1Q8NEA9 526 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 DCAF4Q8WV16 495 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 UBA5Q9GZZ9 404 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 CFAP45Q9UL16 551 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 GLTPD2A6NH11 291 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 F5H6K3 240 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 U2AF2P26368 475 aaKnown RBP eCLIP15.72■□□□□ 0.11
HOXA1-202ENST00000355633 KLRC3Q07444 240 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 ATL3Q6DD88 541 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 SHISA4Q96DD7 197 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 RRP36Q96EU6 259 aaKnown RBP15.72■□□□□ 0.11
HOXA1-202ENST00000355633 ZNF396Q96N95 335 aaPredicted RBP15.72■□□□□ 0.11
HOXA1-202ENST00000355633 PHF20Q9BVI0 1012 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 SCAND2PQ9GZW5 306 aaPredicted RBP15.72■□□□□ 0.11
HOXA1-202ENST00000355633 RIOX1Q9H6W3 641 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 POLR2AP24928 1970 aaKnown RBP15.72■□□□□ 0.11
HOXA1-202ENST00000355633 A0A1W2PRG0 241 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 SLC1A4P43007 532 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 PRAMEF18Q5VWM3 479 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 ZNF341Q9BYN7 854 aa15.72■□□□□ 0.11
HOXA1-202ENST00000355633 ISY1Q9ULR0 285 aaKnown RBP15.72■□□□□ 0.11
HOXA1-202ENST00000355633 DDX49Q9Y6V7 483 aaKnown RBP15.72■□□□□ 0.11
HOXA1-202ENST00000355633 BTBD18B2RXH4 712 aa15.71■□□□□ 0.11
HOXA1-202ENST00000355633 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
HOXA1-202ENST00000355633 MYSM1Q5VVJ2 828 aa15.71■□□□□ 0.11
HOXA1-202ENST00000355633 KCTD1Q719H9 257 aa15.71■□□□□ 0.11
HOXA1-202ENST00000355633 HOMER1Q86YM7 354 aa15.71■□□□□ 0.11
HOXA1-202ENST00000355633 DCPSQ96C86 337 aaKnown RBP15.71■□□□□ 0.11
HOXA1-202ENST00000355633 GMCL1Q96IK5 515 aa15.71■□□□□ 0.11
HOXA1-202ENST00000355633 SPATA32Q96LK8 384 aa15.71■□□□□ 0.11
HOXA1-202ENST00000355633 FOXP1Q9H334 677 aaPredicted RBP15.71■□□□□ 0.11
HOXA1-202ENST00000355633 VAT1LQ9HCJ6 419 aa15.71■□□□□ 0.11
HOXA1-202ENST00000355633 SH3GLB2Q9NR46 395 aa15.71■□□□□ 0.11
HOXA1-202ENST00000355633 GINM1Q9NU53 330 aa15.71■□□□□ 0.11
HOXA1-202ENST00000355633 SEC63Q9UGP8 760 aaKnown RBP15.71■□□□□ 0.11
HOXA1-202ENST00000355633 TMX2Q9Y320 296 aa15.71■□□□□ 0.11
HOXA1-202ENST00000355633 CTNND1O60716 968 aaKnown RBP15.7■□□□□ 0.1
HOXA1-202ENST00000355633 NDUFB10O96000 172 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 ECE1P42892 770 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 USP50Q70EL3 339 aaPredicted RBP15.7■□□□□ 0.1
HOXA1-202ENST00000355633 ACER1Q8TDN7 264 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 GPKOWQ92917 476 aaPredicted RBP eCLIP15.7■□□□□ 0.1
HOXA1-202ENST00000355633 USP28Q96RU2 1077 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 SH2D4AQ9H788 454 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 BRMS1Q9HCU9 246 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.7■□□□□ 0.1
HOXA1-202ENST00000355633 EPHX2P34913 555 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 KRT2P35908 639 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 NLRP5P59047 1200 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 HEATR3Q7Z4Q2 680 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 NOSTRINQ8IVI9 506 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 PIGSQ96S52 555 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 GOPCQ9HD26 462 aa15.7■□□□□ 0.1
HOXA1-202ENST00000355633 ELP1O95163 1332 aa15.69■□□□□ 0.1
HOXA1-202ENST00000355633 CEBPZQ03701 1054 aaKnown RBP15.69■□□□□ 0.1
HOXA1-202ENST00000355633 KLHL40Q2TBA0 621 aa15.69■□□□□ 0.1
HOXA1-202ENST00000355633 SUPT20HL1Q3ZLR7 823 aa15.69■□□□□ 0.1
HOXA1-202ENST00000355633 WWC2Q6AWC2 1192 aa15.69■□□□□ 0.1
HOXA1-202ENST00000355633 SULF1Q8IWU6 871 aa15.69■□□□□ 0.1
HOXA1-202ENST00000355633 CCDC148Q8NFR7 591 aa15.69■□□□□ 0.1
HOXA1-202ENST00000355633 LEO1Q8WVC0 666 aaPredicted RBP15.69■□□□□ 0.1
HOXA1-202ENST00000355633 BARHL2Q9NY43 387 aa15.69■□□□□ 0.1
HOXA1-202ENST00000355633 SCN4AP35499 1836 aa15.69■□□□□ 0.1
HOXA1-202ENST00000355633 GADD45BO75293 160 aaPredicted RBP15.68■□□□□ 0.1
HOXA1-202ENST00000355633 BMP3P12645 472 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 CALML3P27482 149 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 SLC16A2P36021 539 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 NR5A1Q13285 461 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 ADGRF4Q8IZF3 695 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 FAM177A1Q8N128 213 aaPredicted RBP15.68■□□□□ 0.1
HOXA1-202ENST00000355633 OXER1Q8TDS5 423 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 FTOQ9C0B1 505 aaKnown RBP eCLIP15.68■□□□□ 0.1
HOXA1-202ENST00000355633 DOCK1Q14185 1865 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 STXBP3O00186 592 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 MBD3O95983 291 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 INPP5BP32019 993 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 UBE2HP62256 183 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 NPY5RQ15761 445 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 CCDC84Q86UT8 332 aaPredicted RBP15.68■□□□□ 0.1
HOXA1-202ENST00000355633 GPT2Q8TD30 523 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 WRNIP1Q96S55 665 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 NUP88Q99567 741 aaPredicted RBP15.68■□□□□ 0.1
HOXA1-202ENST00000355633 JMJD4Q9H9V9 463 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 ZNF112Q9UJU3 913 aa15.68■□□□□ 0.1
HOXA1-202ENST00000355633 SSC5DA1L4H1 1573 aa15.67■□□□□ 0.1
HOXA1-202ENST00000355633 IQCA1LA6NCM1 817 aa15.67■□□□□ 0.1
HOXA1-202ENST00000355633 hCG_1984214I3L0E3 225 aa15.67■□□□□ 0.1
HOXA1-202ENST00000355633 SPICE1Q8N0Z3 855 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms