RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 ATP8B3O60423 1300 aa12.63□□□□□ -0.39
NUDCD3-202ENST00000355451 TCF3P15923 654 aa12.63□□□□□ -0.39
NUDCD3-202ENST00000355451 MUM1Q2TAK8 710 aa12.63□□□□□ -0.39
NUDCD3-202ENST00000355451 CYP26C1Q6V0L0 522 aa12.63□□□□□ -0.39
NUDCD3-202ENST00000355451 TRIM60Q495X7 471 aa12.63□□□□□ -0.39
NUDCD3-202ENST00000355451 TBC1D7Q9P0N9 293 aa12.63□□□□□ -0.39
NUDCD3-202ENST00000355451 CTNND2Q9UQB3 1225 aa12.63□□□□□ -0.39
NUDCD3-202ENST00000355451 STX1BP61266 288 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 SF3A3Q12874 501 aaKnown RBP eCLIP12.62□□□□□ -0.394e-6■■■□□ 19.1
NUDCD3-202ENST00000355451 KAZNQ674X7 775 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 C16orf62Q7Z3J2 963 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 NLRP7Q8WX94 980 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 FAN1Q9Y2M0 1017 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 CAMSAP2Q08AD1 1489 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 PPIP5K2O43314 1243 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 F13A1P00488 732 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 EEF1B2P24534 225 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 RAD51AP2Q09MP3 1159 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 MAD1L1Q9Y6D9 718 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 RRP9O43818 475 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 NBPF11Q86T75 865 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 NNMTP40261 264 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 GOLGA8FQ08AF8 430 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 GOLGA8DPQ0D2H9 430 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 A0A1B0GUA9 196 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 BPIFB4P59827 614 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 FRA10AC1Q70Z53 315 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 LBHD1Q9BQE6 289 aaPredicted RBP12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 DRC3Q9H069 523 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 PARP2Q9UGN5 583 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 TMCC1O94876 653 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 FLOT2Q14254 428 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 TMTC1Q8IUR5 882 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 ZFP42Q96MM3 310 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 HELLSQ9NRZ9 838 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 RAB20Q9NX57 234 aa12.62□□□□□ -0.39
NUDCD3-202ENST00000355451 PHF21AQ96BD5 680 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 FAF1Q9UNN5 650 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 STK38LQ9Y2H1 464 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 UBE2HP62256 183 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 GRIN1Q05586 938 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 CAPRIN1Q14444 709 aaKnown RBP12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 RUFY4Q6ZNE9 571 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 LMTK3Q96Q04 1460 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 FAM170AA1A519 330 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 CCDC85BQ15834 202 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 MBIPQ9NS73 344 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 CCDC88BA6NC98 1476 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 TAGAPQ8N103 731 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 RNF139Q8WU17 664 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 CDKL2Q92772 493 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 SNX25Q9H3E2 840 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 SCOCQ9UIL1 159 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 ASPHQ12797 758 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 DCAF15Q66K64 600 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 RTL1A6NKG5 1358 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 MICAL3Q7RTP6 2002 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 AOPEPQ8N6M6 819 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 FIS1Q9Y3D6 152 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 EFCAB8A8MWE9 144 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 APBA3O96018 575 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 TMPOP42166 694 aaKnown RBP12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 PDXDC1Q6P996 788 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 DYRK4Q9NR20 520 aa12.61□□□□□ -0.39
NUDCD3-202ENST00000355451 POLGP54098 1239 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 C8orf74Q6P047 294 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 TPH2Q8IWU9 490 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 MAIP1Q8WWC4 291 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 ARHGEF37A1IGU5 675 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 CCNA1P78396 465 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 C6orf203Q9P0P8 240 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 TJAP1Q5JTD0 557 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 CHMP1BQ7LBR1 199 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 GOLGA5Q8TBA6 731 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 NUP58Q9BVL2 599 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 CREB3O43889 395 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 TTBK2Q6IQ55 1244 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 KRT222Q8N1A0 295 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 ZNF233A6NK53 670 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 PPP2R5EQ16537 467 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 NUDCD3Q8IVD9 361 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 PPP2R3CQ969Q6 453 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 PLCD1P51178 756 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 SYCE1Q8N0S2 351 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 RAD18Q9NS91 495 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
NUDCD3-202ENST00000355451 EIF4E1BA6NMX2 242 aaKnown RBP12.59□□□□□ -0.39
NUDCD3-202ENST00000355451 ZSCAN9O15535 394 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-202ENST00000355451 OSBPP22059 807 aa12.59□□□□□ -0.39
NUDCD3-202ENST00000355451 MCMDC2Q4G0Z9 681 aa12.59□□□□□ -0.39
NUDCD3-202ENST00000355451 Q6ZUG5 572 aa12.59□□□□□ -0.39
NUDCD3-202ENST00000355451 TMEM191BP0C7N4 346 aa12.59□□□□□ -0.39
NUDCD3-202ENST00000355451 ARHGAP44Q17R89 818 aa12.59□□□□□ -0.39
NUDCD3-202ENST00000355451 RETREG2Q8NC44 543 aa12.59□□□□□ -0.39
NUDCD3-202ENST00000355451 SH3KBP1Q96B97 665 aa12.59□□□□□ -0.39
NUDCD3-202ENST00000355451 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
NUDCD3-202ENST00000355451 LRMPQ12912 555 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms