RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 TNFRSF25Q93038 417 aa26.27■■□□□ 1.8
SCAMP3-202ENST00000355379 NUP62CLQ9H1M0 184 aa26.27■■□□□ 1.8
SCAMP3-202ENST00000355379 RIOX1Q9H6W3 641 aa26.27■■□□□ 1.8
SCAMP3-202ENST00000355379 MORC2Q9Y6X9 1032 aaPredicted RBP26.27■■□□□ 1.8
SCAMP3-202ENST00000355379 ABCB5Q2M3G0 1257 aa26.26■■□□□ 1.79
SCAMP3-202ENST00000355379 CCDC148Q8NFR7 591 aa26.26■■□□□ 1.79
SCAMP3-202ENST00000355379 WNT10BO00744 389 aa26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 TBC1D12O60347 775 aa26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 NR1I2O75469 434 aa26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 PRELPP51888 382 aa26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 RBM26Q5T8P6 1007 aaKnown RBP26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 CCDC73Q6ZRK6 1079 aa26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 CLEC10AQ8IUN9 316 aa26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 MRPS27Q92552 414 aaKnown RBP26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 RRP36Q96EU6 259 aaKnown RBP26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 CLSTN2Q9H4D0 955 aa26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 BARHL2Q9NY43 387 aa26.25■■□□□ 1.79
SCAMP3-202ENST00000355379 XRCC6P12956 609 aaKnown RBP eCLIP26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 VEGFAP15692 232 aaPredicted RBP26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 ZNF543Q08ER8 600 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 GPATCH4Q5T3I0 446 aaKnown RBP26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 DAGLBQ8NCG7 672 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 PIBF1Q8WXW3 757 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 TSPY26PQ9H489 355 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 CABP5Q9NP86 173 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 CEP131Q9UPN4 1083 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 hCG_1984214I3L0E3 225 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 FAM160A1Q05DH4 1040 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 AXDND1Q5T1B0 1012 aaPredicted RBP26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 RASGRP2Q7LDG7 609 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 ZNF713Q8N859 430 aaPredicted RBP26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 FSIP1Q8NA03 581 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 ENGASEQ8NFI3 743 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 VEZTQ9HBM0 779 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 SYNPO2Q9UMS6 1093 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 NOL7Q9UMY1 257 aaKnown RBP26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 PCDHA4Q9UN74 947 aa26.24■■□□□ 1.79
SCAMP3-202ENST00000355379 STXBP3O00186 592 aa26.23■■□□□ 1.79
SCAMP3-202ENST00000355379 EEF2P13639 858 aaKnown RBP26.23■■□□□ 1.79
SCAMP3-202ENST00000355379 TNNI2P48788 182 aa26.23■■□□□ 1.79
SCAMP3-202ENST00000355379 WWC2Q6AWC2 1192 aa26.23■■□□□ 1.79
SCAMP3-202ENST00000355379 RBM43Q6ZSC3 357 aaKnown RBP26.23■■□□□ 1.79
SCAMP3-202ENST00000355379 CCDC12Q8WUD4 166 aaPredicted RBP26.23■■□□□ 1.79
SCAMP3-202ENST00000355379 DCAF4Q8WV16 495 aa26.23■■□□□ 1.79
SCAMP3-202ENST00000355379 GOLPH3LQ9H4A5 285 aa26.23■■□□□ 1.79
SCAMP3-202ENST00000355379 CUTAO60888 179 aa26.22■■□□□ 1.79
SCAMP3-202ENST00000355379 CMA1P23946 247 aa26.22■■□□□ 1.79
SCAMP3-202ENST00000355379 SEPT2Q15019 361 aa26.22■■□□□ 1.79
SCAMP3-202ENST00000355379 NBPF9Q3BBW0 867 aa26.22■■□□□ 1.79
SCAMP3-202ENST00000355379 BLIDQ8IZY5 108 aa26.22■■□□□ 1.79
SCAMP3-202ENST00000355379 SEC63Q9UGP8 760 aaKnown RBP26.22■■□□□ 1.79
SCAMP3-202ENST00000355379 PGAP2Q9UHJ9 254 aa26.22■■□□□ 1.79
SCAMP3-202ENST00000355379 FRMPD2Q68DX3 1309 aaPredicted RBP26.21■■□□□ 1.79
SCAMP3-202ENST00000355379 TRAPPC10P48553 1259 aa26.21■■□□□ 1.79
SCAMP3-202ENST00000355379 GMPSP49915 693 aaPredicted RBP26.21■■□□□ 1.79
SCAMP3-202ENST00000355379 ATP2B2Q01814 1243 aa26.21■■□□□ 1.79
SCAMP3-202ENST00000355379 ICA1Q05084 483 aa26.21■■□□□ 1.79
SCAMP3-202ENST00000355379 SNW1Q13573 536 aaKnown RBP26.21■■□□□ 1.79
SCAMP3-202ENST00000355379 MAP3K11Q16584 847 aa26.21■■□□□ 1.79
SCAMP3-202ENST00000355379 SIAH1Q8IUQ4 282 aa26.21■■□□□ 1.79
SCAMP3-202ENST00000355379 GPKOWQ92917 476 aaPredicted RBP eCLIP26.21■■□□□ 1.79
SCAMP3-202ENST00000355379 TNMDQ9H2S6 317 aa26.21■■□□□ 1.79
SCAMP3-202ENST00000355379 CTAGE5O15320 804 aa26.2■■□□□ 1.79
SCAMP3-202ENST00000355379 BMP15O95972 392 aa26.2■■□□□ 1.79
SCAMP3-202ENST00000355379 MAP3K10Q02779 954 aa26.2■■□□□ 1.79
SCAMP3-202ENST00000355379 HEATR3Q7Z4Q2 680 aa26.2■■□□□ 1.79
SCAMP3-202ENST00000355379 FUCA2Q9BTY2 467 aa26.2■■□□□ 1.79
SCAMP3-202ENST00000355379 RBSNQ9H1K0 784 aa26.2■■□□□ 1.79
SCAMP3-202ENST00000355379 SBF1O95248 1867 aa26.2■■□□□ 1.78
SCAMP3-202ENST00000355379 TRIM75PA6NK02 468 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 GDF11O95390 407 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 EARS2Q5JPH6 523 aaKnown RBP26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 FMR1NBQ8N0W7 255 aaPredicted RBP26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 GMCL1P1Q8NEA9 526 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 UBA5Q9GZZ9 404 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 CPVLQ9H3G5 476 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 PCDHB6Q9Y5E3 794 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 FAM237AA0A1B0GTK4 181 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 SHTN1A0MZ66 631 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 M0R2N6 131 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 GH2P01242 217 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 MARCKSP29966 332 aaPredicted RBP26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 TNFAIP1Q13829 316 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 RRP1BQ14684 758 aaKnown RBP26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 TYW1BQ6NUM6 668 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 PIGSQ96S52 555 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 ZMYND12Q9H0C1 365 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 GPCPD1Q9NPB8 672 aa26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 CNOT7Q9UIV1 285 aaKnown RBP26.19■■□□□ 1.78
SCAMP3-202ENST00000355379 ESYT2A0FGR8 921 aa26.18■■□□□ 1.78
SCAMP3-202ENST00000355379 KINO60870 393 aaKnown RBP26.18■■□□□ 1.78
SCAMP3-202ENST00000355379 SHROOM1Q2M3G4 852 aaPredicted RBP26.18■■□□□ 1.78
SCAMP3-202ENST00000355379 SLFN13Q68D06 897 aa26.18■■□□□ 1.78
SCAMP3-202ENST00000355379 MICALL2Q8IY33 904 aa26.18■■□□□ 1.78
SCAMP3-202ENST00000355379 KRI1Q8N9T8 703 aaKnown RBP26.18■■□□□ 1.78
SCAMP3-202ENST00000355379 TMEM39BQ9GZU3 492 aa26.18■■□□□ 1.78
SCAMP3-202ENST00000355379 GJA3Q9Y6H8 435 aa26.18■■□□□ 1.78
SCAMP3-202ENST00000355379 FAM205CA6NFA0 338 aa26.17■■□□□ 1.78
SCAMP3-202ENST00000355379 PTPREP23469 700 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms