RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 FSIP1Q8NA03 581 aa19.79■□□□□ 0.76
VPS13B-201ENST00000355155 PDLIM2Q96JY6 352 aa19.79■□□□□ 0.76
VPS13B-201ENST00000355155 PCDHA4Q9UN74 947 aa19.79■□□□□ 0.76
VPS13B-201ENST00000355155 NR5A1Q13285 461 aa19.79■□□□□ 0.76
VPS13B-201ENST00000355155 CCDC82Q8N4S0 544 aa19.79■□□□□ 0.76
VPS13B-201ENST00000355155 ZNF70Q9UC06 446 aaPredicted RBP19.79■□□□□ 0.76
VPS13B-201ENST00000355155 FBXO2Q9UK22 296 aaPredicted RBP19.79■□□□□ 0.76
VPS13B-201ENST00000355155 CCDC192P0DO97 292 aa19.78■□□□□ 0.76
VPS13B-201ENST00000355155 PPP1R18Q6NYC8 613 aa19.78■□□□□ 0.76
VPS13B-201ENST00000355155 ZMYND12Q9H0C1 365 aa19.78■□□□□ 0.76
VPS13B-201ENST00000355155 TDRD3Q9H7E2 651 aaKnown RBP19.78■□□□□ 0.76
VPS13B-201ENST00000355155 SRPRBQ9Y5M8 271 aaKnown RBP19.78■□□□□ 0.76
VPS13B-201ENST00000355155 CXCL9Q07325 125 aa19.78■□□□□ 0.76
VPS13B-201ENST00000355155 GPATCH4Q5T3I0 446 aaKnown RBP19.78■□□□□ 0.76
VPS13B-201ENST00000355155 TMEM179Q6ZVK1 233 aa19.78■□□□□ 0.76
VPS13B-201ENST00000355155 KANSL2Q9H9L4 492 aa19.78■□□□□ 0.76
VPS13B-201ENST00000355155 ATF5Q9Y2D1 282 aaPredicted RBP19.78■□□□□ 0.76
VPS13B-201ENST00000355155 ZNF543Q08ER8 600 aa19.77■□□□□ 0.76
VPS13B-201ENST00000355155 CCDC173Q0VFZ6 552 aa19.77■□□□□ 0.76
VPS13B-201ENST00000355155 GMCL1P1Q8NEA9 526 aa19.77■□□□□ 0.76
VPS13B-201ENST00000355155 DCAF4Q8WV16 495 aa19.77■□□□□ 0.76
VPS13B-201ENST00000355155 NOL7Q9UMY1 257 aaKnown RBP19.77■□□□□ 0.76
VPS13B-201ENST00000355155 WWC2Q6AWC2 1192 aa19.77■□□□□ 0.76
VPS13B-201ENST00000355155 KRI1Q8N9T8 703 aaKnown RBP19.77■□□□□ 0.76
VPS13B-201ENST00000355155 PANK2Q9BZ23 570 aa19.77■□□□□ 0.76
VPS13B-201ENST00000355155 TNIP1Q15025 636 aa19.76■□□□□ 0.75
VPS13B-201ENST00000355155 SHC4Q6S5L8 630 aa19.76■□□□□ 0.75
VPS13B-201ENST00000355155 BLIDQ8IZY5 108 aa19.76■□□□□ 0.75
VPS13B-201ENST00000355155 CCDC12Q8WUD4 166 aaPredicted RBP19.76■□□□□ 0.75
VPS13B-201ENST00000355155 RBM5P52756 815 aaKnown RBP eCLIP19.76■□□□□ 0.75
VPS13B-201ENST00000355155 ORC2Q13416 577 aaPredicted RBP19.76■□□□□ 0.75
VPS13B-201ENST00000355155 DLGAP5Q15398 846 aa19.76■□□□□ 0.75
VPS13B-201ENST00000355155 CERKLQ49MI3 558 aaPredicted RBP19.76■□□□□ 0.75
VPS13B-201ENST00000355155 CIAPIN1Q6FI81 312 aa19.76■□□□□ 0.75
VPS13B-201ENST00000355155 USP17L5A8MUK1 530 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 NDUFA8P51970 172 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 EARS2Q5JPH6 523 aaKnown RBP19.75■□□□□ 0.75
VPS13B-201ENST00000355155 TMOD2Q9NZR1 351 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 MRVI1Q9Y6F6 885 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 TRIM75PA6NK02 468 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 FZD9O00144 591 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 RAD17O75943 681 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 TYRO3Q06418 890 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 R3HDM1Q15032 1099 aaKnown RBP19.75■□□□□ 0.75
VPS13B-201ENST00000355155 SIAH1Q8IUQ4 282 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 TEX2Q8IWB9 1127 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 RRP36Q96EU6 259 aaKnown RBP19.75■□□□□ 0.75
VPS13B-201ENST00000355155 KINO60870 393 aaKnown RBP19.75■□□□□ 0.75
VPS13B-201ENST00000355155 VEGFAP15692 232 aaPredicted RBP19.75■□□□□ 0.75
VPS13B-201ENST00000355155 NLRP5P59047 1200 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 TYW1BQ6NUM6 668 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 OGFOD1Q8N543 542 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 FERMT2Q96AC1 680 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 CABP5Q9NP86 173 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 PCDHB6Q9Y5E3 794 aa19.75■□□□□ 0.75
VPS13B-201ENST00000355155 PFKFB1P16118 471 aa19.74■□□□□ 0.75
VPS13B-201ENST00000355155 DPF2Q92785 391 aa19.74■□□□□ 0.75
VPS13B-201ENST00000355155 ATP2C1P98194 919 aaPredicted RBP19.74■□□□□ 0.75
VPS13B-201ENST00000355155 USP17L2Q6R6M4 530 aa19.74■□□□□ 0.75
VPS13B-201ENST00000355155 GMCL1Q96IK5 515 aa19.74■□□□□ 0.75
VPS13B-201ENST00000355155 CLIP2Q9UDT6 1046 aa19.74■□□□□ 0.75
VPS13B-201ENST00000355155 CACNB3P54284 484 aa19.73■□□□□ 0.75
VPS13B-201ENST00000355155 ATAD5Q96QE3 1844 aa19.73■□□□□ 0.75
VPS13B-201ENST00000355155 hCG_1642624A0A1W2PR95 340 aa19.72■□□□□ 0.75
VPS13B-201ENST00000355155 ZNF202O95125 648 aa19.72■□□□□ 0.75
VPS13B-201ENST00000355155 ARL6IP4Q66PJ3 421 aaKnown RBP19.72■□□□□ 0.75
VPS13B-201ENST00000355155 GINM1Q9NU53 330 aa19.72■□□□□ 0.75
VPS13B-201ENST00000355155 PCDHA6Q9UN73 950 aa19.72■□□□□ 0.75
VPS13B-201ENST00000355155 PCDHA8Q9Y5H6 950 aa19.72■□□□□ 0.75
VPS13B-201ENST00000355155 C4orf32Q8N8J7 132 aa19.72■□□□□ 0.75
VPS13B-201ENST00000355155 TCP10Q12799 353 aa19.71■□□□□ 0.75
VPS13B-201ENST00000355155 TTC38Q5R3I4 469 aa19.71■□□□□ 0.75
VPS13B-201ENST00000355155 BTNL9Q6UXG8 535 aa19.71■□□□□ 0.75
VPS13B-201ENST00000355155 FAM200AQ8TCP9 573 aa19.71■□□□□ 0.75
VPS13B-201ENST00000355155 JDP2Q8WYK2 163 aa19.71■□□□□ 0.75
VPS13B-201ENST00000355155 A0A1B0GVL5 298 aa19.71■□□□□ 0.75
VPS13B-201ENST00000355155 ABCB5Q2M3G0 1257 aa19.71■□□□□ 0.75
VPS13B-201ENST00000355155 GNA11P29992 359 aa19.71■□□□□ 0.74
VPS13B-201ENST00000355155 TUBE1Q9UJT0 475 aa19.71■□□□□ 0.74
VPS13B-201ENST00000355155 PNMA6FA0A0J9YX94 578 aa19.7■□□□□ 0.74
VPS13B-201ENST00000355155 EEF2P13639 858 aaKnown RBP19.7■□□□□ 0.74
VPS13B-201ENST00000355155 MARCKSP29966 332 aaPredicted RBP19.7■□□□□ 0.74
VPS13B-201ENST00000355155 BPIFA3Q9BQP9 254 aa19.7■□□□□ 0.74
VPS13B-201ENST00000355155 SBF1O95248 1867 aa19.7■□□□□ 0.74
VPS13B-201ENST00000355155 FAM205CA6NFA0 338 aa19.7■□□□□ 0.74
VPS13B-201ENST00000355155 LAD1O00515 517 aa19.7■□□□□ 0.74
VPS13B-201ENST00000355155 HS1BP3Q53T59 392 aa19.7■□□□□ 0.74
VPS13B-201ENST00000355155 KRT25Q7Z3Z0 450 aa19.7■□□□□ 0.74
VPS13B-201ENST00000355155 LRRC47Q8N1G4 583 aaKnown RBP19.7■□□□□ 0.74
VPS13B-201ENST00000355155 JMJD4Q9H9V9 463 aa19.7■□□□□ 0.74
VPS13B-201ENST00000355155 MYOZ2Q9NPC6 264 aa19.7■□□□□ 0.74
VPS13B-201ENST00000355155 SEC63Q9UGP8 760 aaKnown RBP19.7■□□□□ 0.74
VPS13B-201ENST00000355155 GOLGA8HP0CJ92 632 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 CAMK4Q16566 473 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 GPKOWQ92917 476 aaPredicted RBP eCLIP19.69■□□□□ 0.74
VPS13B-201ENST00000355155 CSRNP1Q96S65 589 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 TRIM34Q9BYJ4 488 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 C6orf50Q9HD87 102 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 USP25Q9UHP3 1055 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 ZBTB12Q9Y330 459 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms