RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 RAP1GDS1P52306 607 aa8.8□□□□□ -1
HTT-201ENST00000355072 FRA10AC1Q70Z53 315 aa8.8□□□□□ -1
HTT-201ENST00000355072 CFAP36Q96G28 342 aa8.8□□□□□ -1
HTT-201ENST00000355072 BPIFA3Q9BQP9 254 aa8.8□□□□□ -1
HTT-201ENST00000355072 ALG1Q9BT22 464 aa8.8□□□□□ -1
HTT-201ENST00000355072 KRT15P19012 456 aa8.8□□□□□ -1
HTT-201ENST00000355072 SAMD9LQ8IVG5 1584 aa8.8□□□□□ -1
HTT-201ENST00000355072 RAD54L2Q9Y4B4 1467 aa8.8□□□□□ -1
HTT-201ENST00000355072 KIAA1210Q9ULL0 1709 aa8.8□□□□□ -1
HTT-201ENST00000355072 H7C0S8 307 aa8.8□□□□□ -1
HTT-201ENST00000355072 PTGS1P23219 599 aa8.8□□□□□ -1
HTT-201ENST00000355072 ZNF530Q6P9A1 599 aaPredicted RBP8.8□□□□□ -1
HTT-201ENST00000355072 C16orf87Q6PH81 154 aa8.8□□□□□ -1
HTT-201ENST00000355072 NOC4LQ9BVI4 516 aaKnown RBP8.8□□□□□ -1
HTT-201ENST00000355072 APOEP02649 317 aa8.8□□□□□ -1
HTT-201ENST00000355072 AP2B1P63010 937 aa8.8□□□□□ -1
HTT-201ENST00000355072 KRT12Q99456 494 aa8.8□□□□□ -1
HTT-201ENST00000355072 TTC1Q99614 292 aa8.8□□□□□ -1
HTT-201ENST00000355072 UBA5Q9GZZ9 404 aa8.8□□□□□ -1
HTT-201ENST00000355072 MAP2P11137 1827 aaKnown RBP8.8□□□□□ -1
HTT-201ENST00000355072 TSPY2A6NKD2 308 aa8.8□□□□□ -1
HTT-201ENST00000355072 TSPY3P0CV98 308 aa8.8□□□□□ -1
HTT-201ENST00000355072 TSPY8P0CW00 308 aa8.8□□□□□ -1
HTT-201ENST00000355072 TSPY1Q01534 308 aa8.8□□□□□ -1
HTT-201ENST00000355072 EXOC8Q8IYI6 725 aa8.8□□□□□ -1
HTT-201ENST00000355072 KIFC2Q96AC6 838 aa8.8□□□□□ -1
HTT-201ENST00000355072 JPH2Q9BR39 696 aaPredicted RBP8.8□□□□□ -1
HTT-201ENST00000355072 RFX1P22670 979 aa8.79□□□□□ -1
HTT-201ENST00000355072 TBC1D8BQ0IIM8 1120 aa8.79□□□□□ -1
HTT-201ENST00000355072 GRM1Q13255 1194 aa8.79□□□□□ -1
HTT-201ENST00000355072 ANKRD35Q8N283 1001 aa8.79□□□□□ -1
HTT-201ENST00000355072 TRIM63Q969Q1 353 aa8.79□□□□□ -1
HTT-201ENST00000355072 LRRC37BQ96QE4 947 aa8.79□□□□□ -1
HTT-201ENST00000355072 OSBPL9Q96SU4 736 aa8.79□□□□□ -1
HTT-201ENST00000355072 PARVBQ9HBI1 364 aa8.79□□□□□ -1
HTT-201ENST00000355072 PYGMP11217 842 aa8.79□□□□□ -1
HTT-201ENST00000355072 H7C1D1 291 aa8.79□□□□□ -1
HTT-201ENST00000355072 MAPK13O15264 365 aa8.79□□□□□ -1
HTT-201ENST00000355072 AK8Q96MA6 479 aa8.79□□□□□ -1
HTT-201ENST00000355072 MYH3P11055 1940 aa8.79□□□□□ -1
HTT-201ENST00000355072 RNF123Q5XPI4 1314 aa8.79□□□□□ -1
HTT-201ENST00000355072 NLRP6P59044 892 aa8.79□□□□□ -1
HTT-201ENST00000355072 DNM1Q05193 864 aaKnown RBP8.79□□□□□ -1
HTT-201ENST00000355072 ATG16L1Q676U5 607 aa8.79□□□□□ -1
HTT-201ENST00000355072 FAM204AQ9H8W3 233 aa8.79□□□□□ -1
HTT-201ENST00000355072 CHCHD3Q9NX63 227 aaKnown RBP8.79□□□□□ -1
HTT-201ENST00000355072 ITSN1Q15811 1721 aa8.79□□□□□ -1
HTT-201ENST00000355072 ARL1P40616 181 aaPredicted RBP8.79□□□□□ -1
HTT-201ENST00000355072 OCA2Q04671 838 aa8.79□□□□□ -1
HTT-201ENST00000355072 BRIP1Q9BX63 1249 aa8.79□□□□□ -1
HTT-201ENST00000355072 USP16Q9Y5T5 823 aa8.79□□□□□ -1
HTT-201ENST00000355072 RIMS2Q9UQ26 1411 aa8.79□□□□□ -1
HTT-201ENST00000355072 SRGAP2BP0DMP2 458 aa8.79□□□□□ -1
HTT-201ENST00000355072 STAT1P42224 750 aa8.79□□□□□ -1
HTT-201ENST00000355072 RANBP1P43487 201 aa8.79□□□□□ -1
HTT-201ENST00000355072 POLR3EQ9NVU0 708 aa8.79□□□□□ -1
HTT-201ENST00000355072 NLRP2Q9NX02 1062 aa8.79□□□□□ -1
HTT-201ENST00000355072 RTEL1Q9NZ71 1219 aa8.79□□□□□ -1
HTT-201ENST00000355072 SYNGAP1Q96PV0 1343 aa8.79□□□□□ -1
HTT-201ENST00000355072 STX17P56962 302 aa8.79□□□□□ -1
HTT-201ENST00000355072 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.79□□□□□ -1
HTT-201ENST00000355072 DEAF1O75398 565 aaPredicted RBP8.79□□□□□ -1
HTT-201ENST00000355072 CYTH1Q15438 398 aa8.79□□□□□ -1
HTT-201ENST00000355072 SCHIP1Q9P0W5 487 aaPredicted RBP8.79□□□□□ -1
HTT-201ENST00000355072 DDX5P17844 614 aaKnown RBP8.79□□□□□ -1
HTT-201ENST00000355072 NLRP12P59046 1061 aa8.79□□□□□ -1
HTT-201ENST00000355072 THEMISQ8N1K5 641 aaPredicted RBP8.79□□□□□ -1
HTT-201ENST00000355072 SESN1Q9Y6P5 492 aa8.79□□□□□ -1
HTT-201ENST00000355072 A0A1W2PQ27 194 aa8.79□□□□□ -1
HTT-201ENST00000355072 A0A1W2PQ64 194 aa8.79□□□□□ -1
HTT-201ENST00000355072 A0A1W2PQD8 194 aa8.79□□□□□ -1
HTT-201ENST00000355072 SEMA3EO15041 775 aa8.79□□□□□ -1
HTT-201ENST00000355072 TMCC1O94876 653 aa8.79□□□□□ -1
HTT-201ENST00000355072 CHGBP05060 677 aa8.79□□□□□ -1
HTT-201ENST00000355072 HOXC8P31273 242 aa8.79□□□□□ -1
HTT-201ENST00000355072 CCT6AP40227 531 aaKnown RBP8.79□□□□□ -1
HTT-201ENST00000355072 ANO9A1A5B4 782 aa8.79□□□□□ -1
HTT-201ENST00000355072 STXBP3O00186 592 aa8.79□□□□□ -1
HTT-201ENST00000355072 BZW1Q7L1Q6 419 aaKnown RBP8.79□□□□□ -1
HTT-201ENST00000355072 TSR2Q969E8 191 aaKnown RBP8.79□□□□□ -1
HTT-201ENST00000355072 MTBPQ96DY7 904 aa8.79□□□□□ -1
HTT-201ENST00000355072 SPTLC3Q9NUV7 552 aa8.79□□□□□ -1
HTT-201ENST00000355072 ANGEL1Q9UNK9 670 aaKnown RBP8.79□□□□□ -1
HTT-201ENST00000355072 CD2APQ9Y5K6 639 aa8.79□□□□□ -1
HTT-201ENST00000355072 CCDC188H7C350 402 aa8.78□□□□□ -1
HTT-201ENST00000355072 MCF2P10911 925 aa8.78□□□□□ -1
HTT-201ENST00000355072 SDSP20132 328 aa8.78□□□□□ -1
HTT-201ENST00000355072 KIF23Q02241 960 aaPredicted RBP8.78□□□□□ -1
HTT-201ENST00000355072 PSD3Q9NYI0 1048 aa8.78□□□□□ -1
HTT-201ENST00000355072 FLT4P35916 1363 aa8.78□□□□□ -1
HTT-201ENST00000355072 MYO1CO00159 1063 aa8.78□□□□□ -1
HTT-201ENST00000355072 STRNO43815 780 aa8.78□□□□□ -1
HTT-201ENST00000355072 CDR2Q01850 454 aa8.78□□□□□ -1
HTT-201ENST00000355072 FMO2Q99518 471 aa8.78□□□□□ -1
HTT-201ENST00000355072 RUSC2Q8N2Y8 1516 aa8.78□□□□□ -1
HTT-201ENST00000355072 FAM13AO94988 1023 aa8.78□□□□□ -1
HTT-201ENST00000355072 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
HTT-201ENST00000355072 CCDC117Q8IWD4 279 aaPredicted RBP8.78□□□□□ -1
HTT-201ENST00000355072 LZTFL1Q9NQ48 299 aa8.78□□□□□ -1
HTT-201ENST00000355072 USP40Q9NVE5 1235 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms