RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 CASP7P55210 303 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 KARSQ15046 597 aaKnown RBP13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 HERC4Q5GLZ8 1057 aaPredicted RBP13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 DPY19L2Q6NUT2 758 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 CABP7Q86V35 215 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 FBXO11Q86XK2 927 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 FAM212AQ96EL1 285 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 CEP95Q96GE4 821 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.19
PCDHB11-201ENST00000354757 SEPT2Q15019 361 aa13.9□□□□□ -0.19
PCDHB11-201ENST00000354757 UBE2SQ16763 222 aa13.9□□□□□ -0.19
PCDHB11-201ENST00000354757 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.9□□□□□ -0.19
PCDHB11-201ENST00000354757 V9GYY5 206 aaPredicted RBP13.9□□□□□ -0.19
PCDHB11-201ENST00000354757 UBXN1Q04323 297 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 CEP135Q66GS9 1140 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 TMEM47Q9BQJ4 181 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 GOPCQ9HD26 462 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 ARGLU1Q9NWB6 273 aaPredicted RBP13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 BAZ2BQ9UIF8 2168 aaKnown RBP13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 FMNL1O95466 1100 aaPredicted RBP13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 GSDMDP57764 484 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 GNG11P61952 73 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 DCAF17Q5H9S7 520 aaPredicted RBP13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 LZTS2Q9BRK4 669 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 EPB41L4AQ9HCS5 686 aaPredicted RBP13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 RTEL1Q9NZ71 1219 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 PLCD1P51178 756 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 TPH2Q8IWU9 490 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 MYRIPQ8NFW9 859 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 STAG1Q8WVM7 1258 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 CSRNP2Q9H175 543 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 PRM3Q9NNZ6 103 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 PUF60Q9UHX1 559 aaKnown RBP13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 CSADQ9Y600 493 aa13.89□□□□□ -0.19
PCDHB11-201ENST00000354757 IRX3P78415 501 aaPredicted RBP13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 TEX35Q5T0J7 233 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 KIF18AQ8NI77 898 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 OXER1Q8TDS5 423 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 CHURC1Q8WUH1 139 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 LY9Q9HBG7 655 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 KIAA1468Q9P260 1216 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 MROH7-TTC4A0A0A0MT08 1334 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 PRAMEF18Q5VWM3 479 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 NEK8Q86SG6 692 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 SP8Q8IXZ3 490 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 CCDC17Q96LX7 622 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 RESTQ13127 1097 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 SMYD4Q8IYR2 804 aaPredicted RBP13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 SYMPKQ92797 1274 aaKnown RBP13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 KANSL2Q9H9L4 492 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 PCDHA12Q9UN75 941 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 PCDHA5Q9Y5H7 936 aa13.88□□□□□ -0.19
PCDHB11-201ENST00000354757 ZSCAN12O43309 604 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 HOXA13P31271 388 aaPredicted RBP13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 GUCY1A2P33402 732 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 RTKN2Q8IZC4 609 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 LRRC27Q9C0I9 530 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 KIF5CO60282 957 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 NOP2P46087 812 aaKnown RBP13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 CCDC84Q86UT8 332 aaPredicted RBP13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 LINC00301Q8NCQ3 95 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 VTI1AQ96AJ9 217 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 MACROD2A1Z1Q3 448 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 VGLL3A8MV65 326 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 ZBED4O75132 1171 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 MMP1P03956 469 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 SLC15A2Q16348 729 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 GADL1Q6ZQY3 521 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 STAG2Q8N3U4 1231 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 TBCKQ8TEA7 893 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 LRRC4BQ9NT99 713 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 ATP6V0A2Q9Y487 856 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 PXDNLA1KZ92 1463 aa13.87□□□□□ -0.19
PCDHB11-201ENST00000354757 CCDC169A6NNP5 214 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 SNW1Q13573 536 aaKnown RBP13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 SLC39A14Q15043 492 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 CSGALNACT2Q8N6G5 542 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 UBXN4Q92575 508 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 FERMT2Q96AC1 680 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 TAB2Q9NYJ8 693 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 CCPG1Q9ULG6 757 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 DAGLAQ9Y4D2 1042 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 PCP11498 1178 aaKnown RBP13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 STXBP4Q6ZWJ1 553 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 FAM114A1Q8IWE2 563 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 ABCC12Q96J65 1359 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 LZTFL1Q9NQ48 299 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 DNAI1Q9UI46 699 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 ADGRB2O60241 1585 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 UBE2Q2LH0YL09 131 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 AKR1B1P15121 316 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 RDH13Q8NBN7 331 aa13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 DCPSQ96C86 337 aaKnown RBP13.86□□□□□ -0.19
PCDHB11-201ENST00000354757 EPSTI1Q96J88 318 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms