RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 FAM107BQ9H098 131 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 TOMM22Q9NS69 142 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 CAPN11Q9UMQ6 739 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 SAR1BQ9Y6B6 198 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 TNKSO95271 1327 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 ANO9A1A5B4 782 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 LRRIQ3A6PVS8 624 aaPredicted RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 N4BP1O75113 896 aaKnown RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 FGRP09769 529 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 TNNT3P45378 269 aaPredicted RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 TSR1Q2NL82 804 aaKnown RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 DNAJC10Q8IXB1 793 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 RETREG2Q8NC44 543 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 NELFBQ8WX92 580 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 ZKSCAN3Q9BRR0 538 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 VPS54Q9P1Q0 977 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 TRMT112Q9UI30 125 aaKnown RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 REXO2Q9Y3B8 237 aaKnown RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 PRKAB2O43741 272 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 PRPF6O94906 941 aaKnown RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 LONP1P36776 959 aaKnown RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 CCT6AP40227 531 aaKnown RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 IQCEQ6IPM2 695 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 LRRC31Q6UY01 552 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 C10orf67Q8IYJ2 551 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 MB21D1Q8N884 522 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 AFAP1L1Q8TED9 768 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 NUP58Q9BVL2 599 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 VPS16Q9H269 839 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 RSPH14Q9UHP6 348 aa12.85□□□□□ -0.35
CAPN9-202ENST00000354537 LUC7L2Q9Y383 392 aaKnown RBP12.85□□□□□ -0.35
CAPN9-202ENST00000354537 LGALS16A8MUM7 142 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 SYF2O95926 243 aaKnown RBP12.84□□□□□ -0.35
CAPN9-202ENST00000354537 RPN1P04843 607 aaKnown RBP12.84□□□□□ -0.35
CAPN9-202ENST00000354537 CORO7P57737 925 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 PTGDRQ13258 359 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 KCNB1Q14721 858 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 HLFQ16534 295 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 MEA1Q16626 185 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 EARS2Q5JPH6 523 aaKnown RBP12.84□□□□□ -0.35
CAPN9-202ENST00000354537 CADPS2Q86UW7 1296 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 SMYD4Q8IYR2 804 aaPredicted RBP12.84□□□□□ -0.35
CAPN9-202ENST00000354537 CCDC170Q8IYT3 715 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 CCDC82Q8N4S0 544 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 ZNF507Q8TCN5 953 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 COG1Q8WTW3 980 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 IQCDQ96DY2 449 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 SUGCTQ9HAC7 445 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 COL5A2P05997 1499 aaPredicted RBP12.84□□□□□ -0.35
CAPN9-202ENST00000354537 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 RNF225M0QZC1 329 aaPredicted RBP12.84□□□□□ -0.35
CAPN9-202ENST00000354537 KRT86O43790 486 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 CDK17Q00537 523 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 UBXN1Q04323 297 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 ITIH3Q06033 890 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 ZNF174Q15697 407 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 NPY5RQ15761 445 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 ADSSL1Q8N142 457 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 CMTR1Q8N1G2 835 aaKnown RBP12.84□□□□□ -0.35
CAPN9-202ENST00000354537 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 TAB2Q9NYJ8 693 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 HPCAL4Q9UM19 191 aa12.84□□□□□ -0.35
CAPN9-202ENST00000354537 TRIM66O15016 1216 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 RNF40O75150 1001 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 ABL1P00519 1130 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 CASP1P29466 404 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 CYLC1P35663 651 aaPredicted RBP12.83□□□□□ -0.36
CAPN9-202ENST00000354537 NOP2P46087 812 aaKnown RBP12.83□□□□□ -0.36
CAPN9-202ENST00000354537 WWC2Q6AWC2 1192 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 TMTC3Q6ZXV5 915 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 V9GY48 417 aaPredicted RBP12.83□□□□□ -0.36
CAPN9-202ENST00000354537 PDS5AQ29RF7 1337 aaKnown RBP12.83□□□□□ -0.36
CAPN9-202ENST00000354537 PARP1P09874 1014 aaKnown RBP12.83□□□□□ -0.36
CAPN9-202ENST00000354537 DNM2P50570 870 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 NCAPH2Q6IBW4 605 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 ZNF34Q8IZ26 560 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 ENAHQ8N8S7 591 aaPredicted RBP12.83□□□□□ -0.36
CAPN9-202ENST00000354537 PPM1EQ8WY54 764 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 CHP1Q99653 195 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 GUCA1BQ9UMX6 200 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
CAPN9-202ENST00000354537 MYH6P13533 1939 aa12.83□□□□□ -0.36
CAPN9-202ENST00000354537 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 SOS2Q07890 1332 aaPredicted RBP12.82□□□□□ -0.36
CAPN9-202ENST00000354537 TTC26A0AVF1 554 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 EIF3CLB5ME19 914 aaKnown RBP12.82□□□□□ -0.36
CAPN9-202ENST00000354537 SHOX2O60902 331 aaPredicted RBP12.82□□□□□ -0.36
CAPN9-202ENST00000354537 CPP00450 1065 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 GPTP24298 496 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 NT5C2P49902 561 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 TROAPQ12815 778 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms