RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 LENG1Q96BZ8 264 aaPredicted RBP13.62□□□□□ -0.23
RTN3-204ENST00000354497 EHD4Q9H223 541 aa13.62□□□□□ -0.23
RTN3-204ENST00000354497 MROH8Q9H579 483 aa13.62□□□□□ -0.23
RTN3-204ENST00000354497 APBB1O00213 710 aa13.61□□□□□ -0.23
RTN3-204ENST00000354497 POLR3DP05423 398 aaPredicted RBP13.61□□□□□ -0.23
RTN3-204ENST00000354497 FCER1AP12319 257 aa13.61□□□□□ -0.23
RTN3-204ENST00000354497 MAP3K12Q12852 859 aa13.61□□□□□ -0.23
RTN3-204ENST00000354497 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
RTN3-204ENST00000354497 MAGEB6Q8N7X4 407 aa13.61□□□□□ -0.23
RTN3-204ENST00000354497 CDCA7LQ96GN5 454 aa13.61□□□□□ -0.23
RTN3-204ENST00000354497 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.61□□□□□ -0.23
RTN3-204ENST00000354497 STARD7Q9NQZ5 370 aa13.61□□□□□ -0.23
RTN3-204ENST00000354497 FPGT-TNNI3KV9GXZ4 949 aa13.61□□□□□ -0.23
RTN3-204ENST00000354497 PNMA6EA0A0J9YXQ4 647 aa13.6□□□□□ -0.23
RTN3-204ENST00000354497 C19orf67A6NJJ6 358 aa13.6□□□□□ -0.23
RTN3-204ENST00000354497 FLOT1O75955 427 aa13.6□□□□□ -0.23
RTN3-204ENST00000354497 PGK2P07205 417 aa13.6□□□□□ -0.23
RTN3-204ENST00000354497 SHMT1P34896 483 aa13.6□□□□□ -0.23
RTN3-204ENST00000354497 FAAP100Q0VG06 881 aa13.6□□□□□ -0.23
RTN3-204ENST00000354497 MICALL1Q8N3F8 863 aa13.6□□□□□ -0.23
RTN3-204ENST00000354497 ATG4CQ96DT6 458 aa13.6□□□□□ -0.23
RTN3-204ENST00000354497 MMP19Q99542 508 aa13.6□□□□□ -0.23
RTN3-204ENST00000354497 PBX4Q9BYU1 374 aa13.6□□□□□ -0.23
RTN3-204ENST00000354497 MYH1P12882 1939 aa13.59□□□□□ -0.23
RTN3-204ENST00000354497 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
RTN3-204ENST00000354497 GNAI2P04899 355 aa13.59□□□□□ -0.23
RTN3-204ENST00000354497 TAL1P17542 331 aaPredicted RBP13.59□□□□□ -0.23
RTN3-204ENST00000354497 GUCY1A2P33402 732 aa13.59□□□□□ -0.23
RTN3-204ENST00000354497 PLCD1P51178 756 aa13.59□□□□□ -0.23
RTN3-204ENST00000354497 PPIGQ13427 754 aaKnown RBP eCLIP13.59□□□□□ -0.23
RTN3-204ENST00000354497 CCDC174Q6PII3 467 aa13.59□□□□□ -0.23
RTN3-204ENST00000354497 ABRAQ8N0Z2 381 aa13.59□□□□□ -0.23
RTN3-204ENST00000354497 SPICE1Q8N0Z3 855 aa13.59□□□□□ -0.23
RTN3-204ENST00000354497 MB21D1Q8N884 522 aa13.59□□□□□ -0.23
RTN3-204ENST00000354497 TTC28Q96AY4 2481 aa13.58□□□□□ -0.23
RTN3-204ENST00000354497 TIMP1P01033 207 aa13.58□□□□□ -0.24
RTN3-204ENST00000354497 AKR1A1P14550 325 aa13.58□□□□□ -0.24
RTN3-204ENST00000354497 KCTD2Q14681 263 aa13.58□□□□□ -0.24
RTN3-204ENST00000354497 AKNAD1Q5T1N1 836 aa13.58□□□□□ -0.24
RTN3-204ENST00000354497 CERS3Q8IU89 383 aa13.58□□□□□ -0.24
RTN3-204ENST00000354497 VTI1AQ96AJ9 217 aa13.58□□□□□ -0.24
RTN3-204ENST00000354497 NECAB3Q96P71 396 aaPredicted RBP13.58□□□□□ -0.24
RTN3-204ENST00000354497 TINF2Q9BSI4 451 aa13.58□□□□□ -0.24
RTN3-204ENST00000354497 PPP1R12CQ9BZL4 782 aa13.58□□□□□ -0.24
RTN3-204ENST00000354497 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
RTN3-204ENST00000354497 MSRAQ9UJ68 235 aa13.58□□□□□ -0.24
RTN3-204ENST00000354497 CNPY2Q9Y2B0 182 aa13.58□□□□□ -0.24
RTN3-204ENST00000354497 ACRP10323 421 aa13.57□□□□□ -0.24
RTN3-204ENST00000354497 ACLYP53396 1101 aa13.57□□□□□ -0.24
RTN3-204ENST00000354497 ADGRE1Q14246 886 aa13.57□□□□□ -0.24
RTN3-204ENST00000354497 KIAA1755Q5JYT7 1200 aa13.57□□□□□ -0.24
RTN3-204ENST00000354497 MFSD5Q6N075 450 aa13.57□□□□□ -0.24
RTN3-204ENST00000354497 NUP133Q8WUM0 1156 aa13.57□□□□□ -0.24
RTN3-204ENST00000354497 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
RTN3-204ENST00000354497 NKX2-4Q9H2Z4 354 aa13.57□□□□□ -0.24
RTN3-204ENST00000354497 NRBP1Q9UHY1 535 aa13.57□□□□□ -0.24
RTN3-204ENST00000354497 A0A0G2JMZ2 1700 aa13.57□□□□□ -0.24
RTN3-204ENST00000354497 SLC25A27O95847 323 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 CSF2RAP15509 400 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 EVX2Q03828 476 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 TMEM240Q5SV17 173 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 ANKRD33Q7Z3H0 272 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 CLEC10AQ8IUN9 316 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 TMEM199Q8N511 208 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 TOX2Q96NM4 488 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 CCDC8Q9H0W5 538 aaPredicted RBP13.56□□□□□ -0.24
RTN3-204ENST00000354497 ARHGEF10LQ9HCE6 1279 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 GPR108Q9NPR9 543 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 TLR7Q9NYK1 1049 aaKnown RBP13.56□□□□□ -0.24
RTN3-204ENST00000354497 ZHX1Q9UKY1 873 aaPredicted RBP13.56□□□□□ -0.24
RTN3-204ENST00000354497 SYNRGQ9UMZ2 1314 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 RAD21O60216 631 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 ADAMTS4O75173 837 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 TMEM132BQ14DG7 1078 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 SKIV2LQ15477 1246 aaKnown RBP13.56□□□□□ -0.24
RTN3-204ENST00000354497 RAB30Q15771 203 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 KCNA10Q16322 511 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 PSRC1Q6PGN9 363 aaPredicted RBP13.56□□□□□ -0.24
RTN3-204ENST00000354497 ZNF365Q70YC5 407 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 TSEN34Q9BSV6 310 aaKnown RBP13.56□□□□□ -0.24
RTN3-204ENST00000354497 C1QTNF1Q9BXJ1 281 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 MCM9Q9NXL9 1143 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 TBX21Q9UL17 535 aa13.56□□□□□ -0.24
RTN3-204ENST00000354497 MYO5AQ9Y4I1 1855 aaKnown RBP13.55□□□□□ -0.24
RTN3-204ENST00000354497 MOXD2PA6NHM9 499 aa13.55□□□□□ -0.24
RTN3-204ENST00000354497 IGSF3O75054 1194 aa13.55□□□□□ -0.24
RTN3-204ENST00000354497 SURF6O75683 361 aaKnown RBP13.55□□□□□ -0.24
RTN3-204ENST00000354497 ZNF865P0CJ78 1059 aaPredicted RBP13.55□□□□□ -0.24
RTN3-204ENST00000354497 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
RTN3-204ENST00000354497 TMEM179Q6ZVK1 233 aa13.55□□□□□ -0.24
RTN3-204ENST00000354497 C16orf59Q7L2K0 433 aa13.55□□□□□ -0.24
RTN3-204ENST00000354497 ZNF512BQ96KM6 892 aaPredicted RBP13.55□□□□□ -0.24
RTN3-204ENST00000354497 GLT1D1Q96MS3 346 aa13.55□□□□□ -0.24
RTN3-204ENST00000354497 SH2D4AQ9H788 454 aa13.55□□□□□ -0.24
RTN3-204ENST00000354497 SLC28A3Q9HAS3 691 aa13.55□□□□□ -0.24
RTN3-204ENST00000354497 FAM184BQ9ULE4 1060 aa13.55□□□□□ -0.24
RTN3-204ENST00000354497 MROH7Q68CQ1 1323 aa13.54□□□□□ -0.24
RTN3-204ENST00000354497 MUC3AQ02505 3323 aa13.54□□□□□ -0.24
RTN3-204ENST00000354497 MAGEB6P1A0A0J9YX57 407 aa13.54□□□□□ -0.24
RTN3-204ENST00000354497 MYADML2A6NDP7 307 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms