RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 NEK4P51957 841 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 CDCP2Q5VXM1 449 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 KSR2Q6VAB6 950 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 CYFIP1Q7L576 1253 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 WFDC3Q8IUB2 231 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 PHACTR4Q8IZ21 702 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 MYO1HQ8N1T3 1032 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 RIN3Q8TB24 985 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 ELMO3Q96BJ8 720 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 ARPC5LQ9BPX5 153 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 WDR18Q9BV38 432 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 H2AFY2Q9P0M6 372 aaPredicted RBP2.19□□□□□ -2.06
BRCA1-202ENST00000354071 ZNF451Q9Y4E5 1061 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 TNFRSF10CO14798 259 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 CREB3O43889 395 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 PPFIA4O75335 1185 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 PABPC1P11940 636 aaKnown RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 DRD2P14416 443 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 CDC27P30260 824 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 RING1Q06587 406 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 UBE4AQ14139 1066 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 KCNT2Q6UVM3 1135 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 CHSY3Q70JA7 882 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 FAM13CQ8NE31 585 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 ARNT2Q9HBZ2 717 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 AASDHPPTQ9NRN7 309 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 LRP2BPQ9P2M1 347 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 IP6K2Q9UHH9 426 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 ARNTLO00327 626 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 DLX3O60479 287 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 WISP1O95388 367 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 LDHAP00338 332 aaKnown RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 MT-CO1P00395 513 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 CAPNS1P04632 268 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 NEFMP07197 916 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 ODF1Q14990 250 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 LRRC14Q15048 493 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 SV2AQ7L0J3 742 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 CNTNAP5Q8WYK1 1306 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 BTBD6Q96KE9 485 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 EP400Q96L91 3159 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 KLHL25Q9H0H3 589 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 PHAXQ9H814 394 aaKnown RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 LGR6Q9HBX8 967 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 JPH1Q9HDC5 661 aaPredicted RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 SPTBN5Q9NRC6 3674 aaKnown RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 ENAMQ9NRM1 1142 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 SLC5A4Q9NY91 659 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 DIP2BQ9P265 1576 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 SFMBT1Q9UHJ3 866 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 ZBTB21Q9ULJ3 1066 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 PCDHA9Q9Y5H5 950 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 PHLDB1Q86UU1 1377 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 LOC100289279A0A1B0GTE1 492 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 VSTM5A8MXK1 200 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 GPR39O43194 453 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 PIN1Q13526 163 aaPredicted RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 GALEQ14376 348 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 PPP2R5DQ14738 602 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 POU4F3Q15319 338 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 FOXD4L6Q3SYB3 417 aaPredicted RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 ZC3H12AQ5D1E8 599 aaKnown RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 IL31Q6EBC2 164 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 FOXD4L3Q6VB84 417 aaPredicted RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 ADAT2Q7Z6V5 191 aaKnown RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 LRRC47Q8N1G4 583 aaKnown RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 CBARPQ8N350 705 aaPredicted RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 UBASH3BQ8TF42 649 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 LRGUKQ96M69 825 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 CDH19Q9H159 772 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 SLC12A5Q9H2X9 1139 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 GSX1Q9H4S2 264 aaPredicted RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 PTPRHQ9HD43 1115 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 ANLNQ9NQW6 1124 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 FRRS1LQ9P0K9 344 aa2.18□□□□□ -2.06
BRCA1-202ENST00000354071 DDX20Q9UHI6 824 aaKnown RBP2.18□□□□□ -2.06
BRCA1-202ENST00000354071 CNTNAP4Q9C0A0 1308 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 H3BRJ5 948 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 FXR1P51114 621 aaKnown RBP eCLIP2.17□□□□□ -2.06
BRCA1-202ENST00000354071 NEK3P51956 506 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 SETDB1Q15047 1291 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 PRAMEF13Q5VWM6 474 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 TSHZ1Q6ZSZ6 1077 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 DDX1Q92499 740 aaKnown RBP2.17□□□□□ -2.06
BRCA1-202ENST00000354071 IL17RAQ96F46 866 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 CORO1BQ9BR76 489 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 AARSD1Q9BTE6 412 aaKnown RBP2.17□□□□□ -2.06
BRCA1-202ENST00000354071 RUSC1Q9BVN2 902 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 MCM8Q9UJA3 840 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 INTUQ9ULD6 942 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 COQ6Q9Y2Z9 468 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 CHD1O14646 1710 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 CCDC189A1A4V9 331 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 MEIS1O00470 390 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 FSCN2O14926 492 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 PLD2O14939 933 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 OPA1O60313 960 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 LRRN2O75325 713 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 PRKD3O94806 890 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms