RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 SMTNL1A8MU46 457 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 RIMBP2O15034 1052 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 MYL1P05976 194 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 VIL1P09327 827 aaKnown RBP12.3□□□□□ -0.44
EPB41-203ENST00000349460 LONP1P36776 959 aaKnown RBP12.3□□□□□ -0.44
EPB41-203ENST00000349460 SARSP49591 514 aaKnown RBP12.3□□□□□ -0.44
EPB41-203ENST00000349460 FOSBP53539 338 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 EVX2Q03828 476 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 SH3RF1Q7Z6J0 888 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 DCAF4Q8WV16 495 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 GMLQ99445 158 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 SDF4Q9BRK5 362 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 ADCY5O95622 1261 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 CAMK4Q16566 473 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 TTC38Q5R3I4 469 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 KRT25Q7Z3Z0 450 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 CEP95Q96GE4 821 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 MAGEF1Q9HAY2 307 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 DDX4Q9NQI0 724 aaKnown RBP12.3□□□□□ -0.44
EPB41-203ENST00000349460 LTBP3Q9NS15 1303 aa12.3□□□□□ -0.44
EPB41-203ENST00000349460 NLRP5P59047 1200 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 EN1Q05925 392 aaPredicted RBP12.29□□□□□ -0.44
EPB41-203ENST00000349460 AGBL3Q8NEM8 1001 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 OXER1Q8TDS5 423 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 RRP36Q96EU6 259 aaKnown RBP12.29□□□□□ -0.44
EPB41-203ENST00000349460 CABP5Q9NP86 173 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 GINM1Q9NU53 330 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 KLRF2D3W0D1 207 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 PDHBP11177 359 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 NR5A1Q13285 461 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 CKAP2LQ8IYA6 745 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 C4orf32Q8N8J7 132 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 RNF214Q8ND24 703 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 GMCL1P1Q8NEA9 526 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 NAP1L4Q99733 375 aaKnown RBP12.29□□□□□ -0.44
EPB41-203ENST00000349460 SAP30BPQ9UHR5 308 aaKnown RBP12.29□□□□□ -0.44
EPB41-203ENST00000349460 DACH1Q9UI36 760 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 HERC5Q9UII4 1024 aaKnown RBP12.29□□□□□ -0.44
EPB41-203ENST00000349460 PCDHB6Q9Y5E3 794 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 CYTH3O43739 400 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 TBC1D12O60347 775 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 AK8Q96MA6 479 aa12.29□□□□□ -0.44
EPB41-203ENST00000349460 UBE2Q2LH0YL09 131 aa12.28□□□□□ -0.44
EPB41-203ENST00000349460 NEMFO60524 1076 aa12.28□□□□□ -0.44
EPB41-203ENST00000349460 KCNA3P22001 575 aa12.28□□□□□ -0.44
EPB41-203ENST00000349460 SLC35G1Q2M3R5 365 aa12.28□□□□□ -0.44
EPB41-203ENST00000349460 DHX40Q8IX18 779 aaKnown RBP12.28□□□□□ -0.44
EPB41-203ENST00000349460 CUEDC2Q9H467 287 aa12.28□□□□□ -0.44
EPB41-203ENST00000349460 C6orf50Q9HD87 102 aa12.28□□□□□ -0.44
EPB41-203ENST00000349460 MAP3K10Q02779 954 aa12.28□□□□□ -0.44
EPB41-203ENST00000349460 ZNF543Q08ER8 600 aa12.28□□□□□ -0.44
EPB41-203ENST00000349460 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
EPB41-203ENST00000349460 RSBN1LQ6PCB5 846 aaPredicted RBP12.28□□□□□ -0.44
EPB41-203ENST00000349460 KANSL2Q9H9L4 492 aa12.28□□□□□ -0.44
EPB41-203ENST00000349460 ACTN4O43707 911 aaKnown RBP12.27□□□□□ -0.44
EPB41-203ENST00000349460 SLFN14P0C7P3 912 aa12.27□□□□□ -0.44
EPB41-203ENST00000349460 TERF1P54274 439 aa12.27□□□□□ -0.44
EPB41-203ENST00000349460 TPM4P67936 248 aa12.27□□□□□ -0.44
EPB41-203ENST00000349460 WWC2Q6AWC2 1192 aa12.27□□□□□ -0.44
EPB41-203ENST00000349460 TMEM179Q6ZVK1 233 aa12.27□□□□□ -0.44
EPB41-203ENST00000349460 MLKLQ8NB16 471 aa12.27□□□□□ -0.44
EPB41-203ENST00000349460 SLC44A5Q8NCS7 719 aa12.27□□□□□ -0.44
EPB41-203ENST00000349460 ZBED3Q96IU2 234 aaPredicted RBP12.27□□□□□ -0.44
EPB41-203ENST00000349460 FAM198AQ9UFP1 575 aa12.27□□□□□ -0.44
EPB41-203ENST00000349460 EP400Q96L91 3159 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 GOLGA6L19H0YKK7 550 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 MARCKSP29966 332 aaPredicted RBP12.27□□□□□ -0.45
EPB41-203ENST00000349460 ZNF75DP51815 510 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 TRAF1Q13077 416 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 STAG2Q8N3U4 1231 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 GMCL1Q96IK5 515 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 SEC63Q9UGP8 760 aaKnown RBP12.27□□□□□ -0.45
EPB41-203ENST00000349460 PCDHA6Q9UN73 950 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 PCDHA8Q9Y5H6 950 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 PLA2G6O60733 806 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 ZRSR1Q15695 479 aaKnown RBP12.27□□□□□ -0.45
EPB41-203ENST00000349460 FAM83AQ86UY5 434 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 CMTR1Q8N1G2 835 aaKnown RBP12.27□□□□□ -0.45
EPB41-203ENST00000349460 DNAJC25Q9H1X3 360 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 IMPACTQ9P2X3 320 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 HDAC9Q9UKV0 1011 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 STX8Q9UNK0 236 aa12.27□□□□□ -0.45
EPB41-203ENST00000349460 PNMA6FA0A0J9YX94 578 aa12.26□□□□□ -0.45
EPB41-203ENST00000349460 MSL1Q68DK7 614 aa12.26□□□□□ -0.45
EPB41-203ENST00000349460 CNNM3Q8NE01 707 aa12.26□□□□□ -0.45
EPB41-203ENST00000349460 CCSER1Q9C0I3 900 aa12.26□□□□□ -0.45
EPB41-203ENST00000349460 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.26□□□□□ -0.45
EPB41-203ENST00000349460 PPFIA3O75145 1194 aa12.26□□□□□ -0.45
EPB41-203ENST00000349460 SMC2O95347 1197 aa12.26□□□□□ -0.45
EPB41-203ENST00000349460 AKR1B1P15121 316 aa12.26□□□□□ -0.45
EPB41-203ENST00000349460 ERCC5P28715 1186 aaPredicted RBP12.26□□□□□ -0.45
EPB41-203ENST00000349460 BTNL9Q6UXG8 535 aa12.26□□□□□ -0.45
EPB41-203ENST00000349460 GSDMAQ96QA5 445 aa12.26□□□□□ -0.45
EPB41-203ENST00000349460 KCND1Q9NSA2 647 aa12.26□□□□□ -0.45
EPB41-203ENST00000349460 MSNP26038 577 aaKnown RBP12.25□□□□□ -0.45
EPB41-203ENST00000349460 POSTNQ15063 836 aa12.25□□□□□ -0.45
EPB41-203ENST00000349460 C11orf57Q6ZUT1 292 aaPredicted RBP12.25□□□□□ -0.45
EPB41-203ENST00000349460 DBNDD1Q9H9R9 158 aa12.25□□□□□ -0.45
EPB41-203ENST00000349460 RRAGDQ9NQL2 400 aaPredicted RBP12.25□□□□□ -0.45
EPB41-203ENST00000349460 CHRNA5P30532 468 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms