RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CCDC85CA6NKD9 419 aa26.1■■□□□ 1.77
SNX3-202ENST00000349379 ESR2Q92731 530 aa26.1■■□□□ 1.77
SNX3-202ENST00000349379 MAP4K1Q92918 833 aa26.1■■□□□ 1.77
SNX3-202ENST00000349379 COA7Q96BR5 231 aa26.1■■□□□ 1.77
SNX3-202ENST00000349379 ATG4CQ96DT6 458 aa26.1■■□□□ 1.77
SNX3-202ENST00000349379 NUP88Q99567 741 aaPredicted RBP26.1■■□□□ 1.77
SNX3-202ENST00000349379 GJD2Q9UKL4 321 aa26.1■■□□□ 1.77
SNX3-202ENST00000349379 PPP1R9AQ9ULJ8 1098 aa26.1■■□□□ 1.77
SNX3-202ENST00000349379 STX8Q9UNK0 236 aa26.1■■□□□ 1.77
SNX3-202ENST00000349379 U3KPZ7 1027 aaPredicted RBP26.1■■□□□ 1.77
SNX3-202ENST00000349379 CAPN15O75808 1086 aa26.09■■□□□ 1.77
SNX3-202ENST00000349379 MAPK4P31152 587 aa26.09■■□□□ 1.77
SNX3-202ENST00000349379 FLT3LGP49771 235 aa26.09■■□□□ 1.77
SNX3-202ENST00000349379 IRF5Q13568 498 aa26.09■■□□□ 1.77
SNX3-202ENST00000349379 SLFN13Q68D06 897 aa26.09■■□□□ 1.77
SNX3-202ENST00000349379 CENPFP49454 3210 aa26.08■■□□□ 1.77
SNX3-202ENST00000349379 RAD21O60216 631 aa26.08■■□□□ 1.77
SNX3-202ENST00000349379 CYP21A2P08686 494 aa26.08■■□□□ 1.77
SNX3-202ENST00000349379 RCSD1Q6JBY9 416 aa26.08■■□□□ 1.77
SNX3-202ENST00000349379 GMCL1Q96IK5 515 aa26.08■■□□□ 1.77
SNX3-202ENST00000349379 CCNA1P78396 465 aa26.07■■□□□ 1.76
SNX3-202ENST00000349379 SLC9C1Q4G0N8 1177 aa26.07■■□□□ 1.76
SNX3-202ENST00000349379 RAET1EQ8TD07 263 aa26.07■■□□□ 1.76
SNX3-202ENST00000349379 ZNF333Q96JL9 665 aa26.07■■□□□ 1.76
SNX3-202ENST00000349379 TTC14Q96N46 770 aa26.07■■□□□ 1.76
SNX3-202ENST00000349379 LSG1Q9H089 658 aaKnown RBP26.07■■□□□ 1.76
SNX3-202ENST00000349379 KIAA0100Q14667 2235 aaKnown RBP26.06■■□□□ 1.76
SNX3-202ENST00000349379 B4E1Z4 1266 aa26.06■■□□□ 1.76
SNX3-202ENST00000349379 KDM4AO75164 1064 aa26.06■■□□□ 1.76
SNX3-202ENST00000349379 GPR142Q7Z601 462 aa26.06■■□□□ 1.76
SNX3-202ENST00000349379 REPS2Q8NFH8 660 aa26.06■■□□□ 1.76
SNX3-202ENST00000349379 SLF1Q9BQI6 1058 aa26.06■■□□□ 1.76
SNX3-202ENST00000349379 TMEM47Q9BQJ4 181 aa26.06■■□□□ 1.76
SNX3-202ENST00000349379 SPATC1LQ9H0A9 340 aa26.06■■□□□ 1.76
SNX3-202ENST00000349379 CNNM2Q9H8M5 875 aa26.06■■□□□ 1.76
SNX3-202ENST00000349379 CDC45O75419 566 aa26.05■■□□□ 1.76
SNX3-202ENST00000349379 TOP1P11387 765 aaKnown RBP26.05■■□□□ 1.76
SNX3-202ENST00000349379 BMP3P12645 472 aa26.05■■□□□ 1.76
SNX3-202ENST00000349379 PXYLP1Q8TE99 480 aa26.05■■□□□ 1.76
SNX3-202ENST00000349379 MOV10L1Q9BXT6 1211 aaKnown RBP26.05■■□□□ 1.76
SNX3-202ENST00000349379 KRT23Q9C075 422 aa26.05■■□□□ 1.76
SNX3-202ENST00000349379 RBM8AQ9Y5S9 174 aaKnown RBP26.05■■□□□ 1.76
SNX3-202ENST00000349379 VWA5AO00534 786 aa26.04■■□□□ 1.76
SNX3-202ENST00000349379 GRK4P32298 578 aa26.04■■□□□ 1.76
SNX3-202ENST00000349379 TMEM132BQ14DG7 1078 aa26.04■■□□□ 1.76
SNX3-202ENST00000349379 MORN1Q5T089 497 aa26.04■■□□□ 1.76
SNX3-202ENST00000349379 SHCBP1Q8NEM2 672 aa26.04■■□□□ 1.76
SNX3-202ENST00000349379 SH3TC2Q8TF17 1288 aa26.04■■□□□ 1.76
SNX3-202ENST00000349379 SOCS4Q8WXH5 440 aa26.04■■□□□ 1.76
SNX3-202ENST00000349379 USP6NLQ92738 828 aa26.04■■□□□ 1.76
SNX3-202ENST00000349379 ZSWIM5Q9P217 1185 aa26.04■■□□□ 1.76
SNX3-202ENST00000349379 FEM1BQ9UK73 627 aa26.04■■□□□ 1.76
SNX3-202ENST00000349379 KIAA1211Q6ZU35 1233 aa26.03■■□□□ 1.76
SNX3-202ENST00000349379 PLEKHH3Q7Z736 793 aa26.03■■□□□ 1.76
SNX3-202ENST00000349379 NBPF11Q86T75 865 aa26.03■■□□□ 1.76
SNX3-202ENST00000349379 DGKHQ86XP1 1220 aa26.03■■□□□ 1.76
SNX3-202ENST00000349379 PRPF38AQ8NAV1 312 aaKnown RBP26.03■■□□□ 1.76
SNX3-202ENST00000349379 SLAIN1Q8ND83 568 aa26.03■■□□□ 1.76
SNX3-202ENST00000349379 ANKS1AQ92625 1134 aa26.03■■□□□ 1.76
SNX3-202ENST00000349379 ZNF214Q9UL59 606 aaPredicted RBP26.03■■□□□ 1.76
SNX3-202ENST00000349379 TAF6LQ9Y6J9 622 aa26.03■■□□□ 1.76
SNX3-202ENST00000349379 PLXNA1Q9UIW2 1896 aa26.02■■□□□ 1.76
SNX3-202ENST00000349379 ADCY3O60266 1144 aa26.02■■□□□ 1.76
SNX3-202ENST00000349379 PLA2G6O60733 806 aa26.02■■□□□ 1.76
SNX3-202ENST00000349379 MCCP23508 829 aa26.02■■□□□ 1.76
SNX3-202ENST00000349379 SLC1A4P43007 532 aa26.02■■□□□ 1.76
SNX3-202ENST00000349379 CCDC178Q5BJE1 867 aa26.02■■□□□ 1.76
SNX3-202ENST00000349379 RASGRP2Q7LDG7 609 aa26.02■■□□□ 1.76
SNX3-202ENST00000349379 IQCA1Q86XH1 822 aa26.02■■□□□ 1.76
SNX3-202ENST00000349379 NUDT12Q9BQG2 462 aa26.02■■□□□ 1.76
SNX3-202ENST00000349379 ZKSCAN3Q9BRR0 538 aa26.02■■□□□ 1.76
SNX3-202ENST00000349379 STOX1Q6ZVD7 989 aa26.01■■□□□ 1.75
SNX3-202ENST00000349379 CCAR1Q8IX12 1150 aaKnown RBP26.01■■□□□ 1.75
SNX3-202ENST00000349379 DCAF4Q8WV16 495 aa26.01■■□□□ 1.75
SNX3-202ENST00000349379 SMCHD1A6NHR9 2005 aa26■■□□□ 1.75
SNX3-202ENST00000349379 ERCC3P19447 782 aa26■■□□□ 1.75
SNX3-202ENST00000349379 PTPREP23469 700 aa26■■□□□ 1.75
SNX3-202ENST00000349379 STAT2P52630 851 aa26■■□□□ 1.75
SNX3-202ENST00000349379 SAMD1Q6SPF0 538 aaPredicted RBP26■■□□□ 1.75
SNX3-202ENST00000349379 RIOX2Q8IUF8 465 aa26■■□□□ 1.75
SNX3-202ENST00000349379 ZSCAN10Q96SZ4 725 aaPredicted RBP26■■□□□ 1.75
SNX3-202ENST00000349379 SLC15A5A6NIM6 579 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 TMEM232C9JQI7 657 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 E7EWF7 191 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 ATP2A1O14983 1001 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 SNHG28P0DPA3 235 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 XRCC5P13010 732 aaKnown RBP25.99■■□□□ 1.75
SNX3-202ENST00000349379 GRB14Q14449 540 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 NECTIN1Q15223 517 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 CASC1Q6TDU7 716 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 FAM160B2Q86V87 743 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 ENAHQ8N8S7 591 aaPredicted RBP25.99■■□□□ 1.75
SNX3-202ENST00000349379 MROH8Q9H579 483 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 SLC38A10Q9HBR0 1119 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 ANO2Q9NQ90 1003 aa25.99■■□□□ 1.75
SNX3-202ENST00000349379 TNKSO95271 1327 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 SLC25A27O95847 323 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 FDX1P10109 184 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 PDHBP11177 359 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 ELNP15502 786 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms