RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 KLC4Q9NSK0 619 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 REXO2Q9Y3B8 237 aaKnown RBP11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 ARAP2Q8WZ64 1704 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 RIC1Q4ADV7 1423 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 ANO9A1A5B4 782 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 GOLGA8AA7E2F4 631 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 POLR2DO15514 142 aaKnown RBP11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 ATP1A1P05023 1023 aaKnown RBP11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 UQCRFS1P1P0C7P4 283 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 CALRP27797 417 aaKnown RBP11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 ADORA1P30542 326 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 ACTN3Q08043 901 aaPredicted RBP11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 CRYMQ14894 314 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 PPP2R5BQ15173 497 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 EMC10Q5UCC4 262 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 LRCH2Q5VUJ6 765 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 CCDC70Q6NSX1 233 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 CYB5R4Q7L1T6 521 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 TEX11Q8IYF3 940 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 MAGEC3Q8TD91 643 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 FAXDC2Q96IV6 333 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 AIFM3Q96NN9 605 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 SLF1Q9BQI6 1058 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 LY9Q9HBG7 655 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 FBXO2Q9UK22 296 aaPredicted RBP11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 UBN2Q6ZU65 1347 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 TNS3Q68CZ2 1445 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 SRRM3A6NNA2 597 aaPredicted RBP11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 NDUFA10O95299 355 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 MMP1P03956 469 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 NAP1L1P55209 391 aaKnown RBP11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 ITIH3Q06033 890 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 TBC1D10CQ8IV04 446 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 GSPT2Q8IYD1 628 aaKnown RBP11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 TMTC2Q8N394 836 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 MMGT1Q8N4V1 131 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 ZBTB38Q8NAP3 1195 aaPredicted RBP11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 N4BP2L2Q92802 583 aaPredicted RBP11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 KRT23Q9C075 422 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 LIMA1Q9UHB6 759 aaKnown RBP11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 KCNG1Q9UIX4 513 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 ODF2LQ9ULJ1 636 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 GUCA1BQ9UMX6 200 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 IQSEC3Q9UPP2 1182 aaPredicted RBP11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 SRPRBQ9Y5M8 271 aaKnown RBP11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 EPN1Q9Y6I3 576 aaPredicted RBP11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 MYH3P11055 1940 aa11.57□□□□□ -0.56
CHRNA1-202ENST00000348749 COL22A1Q8NFW1 1626 aaPredicted RBP11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 LRRC10BA6NIK2 292 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 CLSTN1O94985 981 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 BMP15O95972 392 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 SCARF1Q14162 830 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 HSP90AB3PQ58FF7 597 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 ZNF572Q7Z3I7 529 aaPredicted RBP11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 IQCA1Q86XH1 822 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 EGFL6Q8IUX8 553 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 TRIM22Q8IYM9 498 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 RBM33Q96EV2 1170 aaKnown RBP11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 GDAP1L1Q96MZ0 367 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 EPN3Q9H201 632 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 HDAC6Q9UBN7 1215 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 RIPOR2Q9Y4F9 1068 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 DOCK2Q92608 1830 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 ENC1O14682 589 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 ZMYND10O75800 440 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 ARID4AP29374 1257 aaPredicted RBP11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 C11orf91Q3C1V1 193 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 CCDC40Q4G0X9 1142 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 TTMPQ5BVD1 217 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 TMEM67Q5HYA8 995 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 SPECC1Q5M775 1068 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 KDM7AQ6ZMT4 941 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 SND1Q7KZF4 910 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 FMNL3Q8IVF7 1028 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 CCDC50Q8IVM0 306 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 JAKMIP2Q96AA8 810 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 NUP88Q99567 741 aaPredicted RBP11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 ZBTB3Q9H5J0 574 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 SEC31BQ9NQW1 1179 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 FAM217BQ9NTX9 383 aaPredicted RBP11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 TRIM10Q9UDY6 481 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 SLC12A7Q9Y666 1083 aa11.56□□□□□ -0.56
CHRNA1-202ENST00000348749 RANBP6O60518 1105 aaKnown RBP11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 DEXIO95424 95 aa11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 TNFRSF8P28908 595 aa11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 MCAMP43121 646 aa11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 EPHB4P54760 987 aa11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 APBA1Q02410 837 aa11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 NAA35Q5VZE5 725 aa11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 EMBQ6PCB8 327 aa11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 GRAMD1CQ8IYS0 662 aa11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 CAVIN3Q969G5 261 aa11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 RABEP2Q9H5N1 569 aa11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 ACTR5Q9H9F9 607 aaPredicted RBP11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 RBM28Q9NW13 759 aaKnown RBP11.55□□□□□ -0.56
CHRNA1-202ENST00000348749 PATL2C9JE40 543 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-202ENST00000348749 RNF225M0QZC1 329 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms