RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 FRMPD2Q68DX3 1309 aaPredicted RBP21.5■■□□□ 1.03
PTN-201ENST00000348225 BAZ2BQ9UIF8 2168 aaKnown RBP21.5■■□□□ 1.03
PTN-201ENST00000348225 YBX3P16989 372 aaKnown RBP eCLIP21.5■■□□□ 1.03
PTN-201ENST00000348225 CALML3P27482 149 aa21.5■■□□□ 1.03
PTN-201ENST00000348225 NLRP5P59047 1200 aa21.5■■□□□ 1.03
PTN-201ENST00000348225 STK38Q15208 465 aa21.5■■□□□ 1.03
PTN-201ENST00000348225 APOBEC3FQ8IUX4 373 aaKnown RBP21.5■■□□□ 1.03
PTN-201ENST00000348225 KCNG4Q8TDN1 519 aa21.5■■□□□ 1.03
PTN-201ENST00000348225 NASPP49321 788 aaPredicted RBP21.49■■□□□ 1.03
PTN-201ENST00000348225 MAP3K10Q02779 954 aa21.49■■□□□ 1.03
PTN-201ENST00000348225 CCDC96Q2M329 555 aa21.49■■□□□ 1.03
PTN-201ENST00000348225 SHROOM1Q2M3G4 852 aaPredicted RBP21.49■■□□□ 1.03
PTN-201ENST00000348225 SLC35G1Q2M3R5 365 aa21.49■■□□□ 1.03
PTN-201ENST00000348225 ANO1Q5XXA6 986 aa21.49■■□□□ 1.03
PTN-201ENST00000348225 FTOQ9C0B1 505 aaKnown RBP eCLIP21.49■■□□□ 1.03
PTN-201ENST00000348225 RIOX1Q9H6W3 641 aa21.49■■□□□ 1.03
PTN-201ENST00000348225 ARHGEF10LQ9HCE6 1279 aa21.49■■□□□ 1.03
PTN-201ENST00000348225 RRP1BQ14684 758 aaKnown RBP21.48■■□□□ 1.03
PTN-201ENST00000348225 RILPL1Q5EBL4 403 aa21.48■■□□□ 1.03
PTN-201ENST00000348225 CDAN1Q8IWY9 1227 aa21.48■■□□□ 1.03
PTN-201ENST00000348225 GMCL1P1Q8NEA9 526 aa21.48■■□□□ 1.03
PTN-201ENST00000348225 CCDC12Q8WUD4 166 aaPredicted RBP21.48■■□□□ 1.03
PTN-201ENST00000348225 SHISA4Q96DD7 197 aa21.48■■□□□ 1.03
PTN-201ENST00000348225 ZBTB21Q9ULJ3 1066 aa21.48■■□□□ 1.03
PTN-201ENST00000348225 hCG_1984214I3L0E3 225 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 SF3A1Q15459 793 aaKnown RBP21.47■■□□□ 1.03
PTN-201ENST00000348225 SLFN13Q68D06 897 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 GALNT17Q6IS24 598 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 HEATR3Q7Z4Q2 680 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 ZNF713Q8N859 430 aaPredicted RBP21.47■■□□□ 1.03
PTN-201ENST00000348225 LINC00301Q8NCQ3 95 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 GPCPD1Q9NPB8 672 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 BARHL2Q9NY43 387 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 CLIC4Q9Y696 253 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 NR5A1Q13285 461 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 TPRNQ4KMQ1 711 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 MIGA2Q7L4E1 593 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 SIAH1Q8IUQ4 282 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 OXER1Q8TDS5 423 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 GPKOWQ92917 476 aaPredicted RBP eCLIP21.47■■□□□ 1.03
PTN-201ENST00000348225 HOOK2Q96ED9 719 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 TEPSINQ96N21 525 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 UBA5Q9GZZ9 404 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 DEFB129Q9H1M3 183 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 TMEM63CQ9P1W3 806 aa21.47■■□□□ 1.03
PTN-201ENST00000348225 LMOD1P29536 600 aaPredicted RBP21.46■■□□□ 1.03
PTN-201ENST00000348225 CAP2P40123 477 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 SLC1A4P43007 532 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 ME1P48163 572 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 JAG1P78504 1218 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 ZSCAN23Q3MJ62 389 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 WWC2Q6AWC2 1192 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 HOMER1Q86YM7 354 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 BICD2Q8TD16 824 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 GMCL1Q96IK5 515 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 PGBD1Q96JS3 809 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 CPVLQ9H3G5 476 aa21.46■■□□□ 1.03
PTN-201ENST00000348225 ASTN2O75129 1339 aaPredicted RBP21.46■■□□□ 1.03
PTN-201ENST00000348225 SPTLC2O15270 562 aa21.45■■□□□ 1.02
PTN-201ENST00000348225 RAD21O60216 631 aa21.45■■□□□ 1.02
PTN-201ENST00000348225 JMYQ8N9B5 988 aa21.45■■□□□ 1.02
PTN-201ENST00000348225 TRPM4Q8TD43 1214 aa21.45■■□□□ 1.02
PTN-201ENST00000348225 PIGSQ96S52 555 aa21.45■■□□□ 1.02
PTN-201ENST00000348225 SH2D4AQ9H788 454 aa21.45■■□□□ 1.02
PTN-201ENST00000348225 VAT1LQ9HCJ6 419 aa21.45■■□□□ 1.02
PTN-201ENST00000348225 ISY1Q9ULR0 285 aaKnown RBP21.45■■□□□ 1.02
PTN-201ENST00000348225 NOL7Q9UMY1 257 aaKnown RBP21.45■■□□□ 1.02
PTN-201ENST00000348225 F5H6K3 240 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 STXBP3O00186 592 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 ASNSP08243 561 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 KLRC3Q07444 240 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 NPY5RQ15761 445 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 CCDC183Q5T5S1 534 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 ANGEL2Q5VTE6 544 aaKnown RBP21.44■■□□□ 1.02
PTN-201ENST00000348225 C9orf131Q5VYM1 1079 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 GINM1Q9NU53 330 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 PCDHA4Q9UN74 947 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 PPP2R3BQ9Y5P8 575 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 ATAD5Q96QE3 1844 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 VEGFAP15692 232 aaPredicted RBP21.44■■□□□ 1.02
PTN-201ENST00000348225 SLC39A14Q15043 492 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 DCAF15Q66K64 600 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 KCTD1Q719H9 257 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 BLIDQ8IZY5 108 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 DAGLBQ8NCG7 672 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 CEP131Q9UPN4 1083 aa21.44■■□□□ 1.02
PTN-201ENST00000348225 SCAF8Q9UPN6 1271 aaKnown RBP21.44■■□□□ 1.02
PTN-201ENST00000348225 DDNO94850 711 aaPredicted RBP21.43■■□□□ 1.02
PTN-201ENST00000348225 NDUFB10O96000 172 aa21.43■■□□□ 1.02
PTN-201ENST00000348225 EPS15P42566 896 aa21.43■■□□□ 1.02
PTN-201ENST00000348225 NAPAP54920 295 aa21.43■■□□□ 1.02
PTN-201ENST00000348225 ZNF445P59923 1031 aa21.43■■□□□ 1.02
PTN-201ENST00000348225 ADGRF4Q8IZF3 695 aa21.43■■□□□ 1.02
PTN-201ENST00000348225 TNFRSF25Q93038 417 aa21.43■■□□□ 1.02
PTN-201ENST00000348225 GOPCQ9HD26 462 aa21.43■■□□□ 1.02
PTN-201ENST00000348225 TMX2Q9Y320 296 aa21.43■■□□□ 1.02
PTN-201ENST00000348225 PPP6R2O75170 966 aa21.42■■□□□ 1.02
PTN-201ENST00000348225 ADARB2Q9NS39 739 aaKnown RBP21.42■■□□□ 1.02
PTN-201ENST00000348225 GGA3Q9NZ52 723 aa21.42■■□□□ 1.02
PTN-201ENST00000348225 PCDHA7Q9UN72 937 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms