RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.28■■□□□ 1.48
PTPN18-202ENST00000347849 SCNN1DP51172 638 aa24.28■■□□□ 1.48
PTPN18-202ENST00000347849 FANCCQ00597 558 aa24.28■■□□□ 1.48
PTPN18-202ENST00000347849 SLC35G1Q2M3R5 365 aa24.28■■□□□ 1.48
PTPN18-202ENST00000347849 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.28■■□□□ 1.48
PTPN18-202ENST00000347849 CDK5RAP2Q96SN8 1893 aa24.28■■□□□ 1.48
PTPN18-202ENST00000347849 ATP1A3P13637 1013 aa24.27■■□□□ 1.48
PTPN18-202ENST00000347849 H2AFXP16104 143 aaPredicted RBP24.27■■□□□ 1.48
PTPN18-202ENST00000347849 CDK8P49336 464 aa24.27■■□□□ 1.48
PTPN18-202ENST00000347849 EN1Q05925 392 aaPredicted RBP24.27■■□□□ 1.48
PTPN18-202ENST00000347849 DGKHQ86XP1 1220 aa24.27■■□□□ 1.48
PTPN18-202ENST00000347849 ZNF444Q8N0Y2 327 aaPredicted RBP24.27■■□□□ 1.48
PTPN18-202ENST00000347849 HPSEQ9Y251 543 aa24.27■■□□□ 1.48
PTPN18-202ENST00000347849 NAV1Q8NEY1 1877 aa24.27■■□□□ 1.48
PTPN18-202ENST00000347849 CHRNA5P30532 468 aa24.27■■□□□ 1.48
PTPN18-202ENST00000347849 PICALMQ13492 652 aa24.27■■□□□ 1.48
PTPN18-202ENST00000347849 BMS1Q14692 1282 aaKnown RBP24.27■■□□□ 1.48
PTPN18-202ENST00000347849 DBNDD1Q9H9R9 158 aa24.27■■□□□ 1.48
PTPN18-202ENST00000347849 DNAI1Q9UI46 699 aa24.27■■□□□ 1.48
PTPN18-202ENST00000347849 STX8Q9UNK0 236 aa24.27■■□□□ 1.48
PTPN18-202ENST00000347849 C2CD5Q86YS7 1000 aa24.26■■□□□ 1.47
PTPN18-202ENST00000347849 AMOTL1Q8IY63 956 aa24.26■■□□□ 1.47
PTPN18-202ENST00000347849 PDGFDQ9GZP0 370 aaPredicted RBP24.26■■□□□ 1.47
PTPN18-202ENST00000347849 MYH6P13533 1939 aa24.26■■□□□ 1.47
PTPN18-202ENST00000347849 ARHGAP29Q52LW3 1261 aa24.26■■□□□ 1.47
PTPN18-202ENST00000347849 DDX4Q9NQI0 724 aaKnown RBP24.26■■□□□ 1.47
PTPN18-202ENST00000347849 TTF2Q9UNY4 1162 aaKnown RBP24.26■■□□□ 1.47
PTPN18-202ENST00000347849 SNED1Q8TER0 1413 aa24.26■■□□□ 1.47
PTPN18-202ENST00000347849 CLCN6P51797 869 aa24.25■■□□□ 1.47
PTPN18-202ENST00000347849 RILPL1Q5EBL4 403 aa24.25■■□□□ 1.47
PTPN18-202ENST00000347849 RESP18Q5W5W9 173 aa24.25■■□□□ 1.47
PTPN18-202ENST00000347849 C16orf86Q6ZW13 317 aa24.25■■□□□ 1.47
PTPN18-202ENST00000347849 HMGB2P26583 209 aaKnown RBP24.25■■□□□ 1.47
PTPN18-202ENST00000347849 KCNJ6P48051 423 aa24.25■■□□□ 1.47
PTPN18-202ENST00000347849 TMEM47Q9BQJ4 181 aa24.25■■□□□ 1.47
PTPN18-202ENST00000347849 TNS1Q9HBL0 1735 aaKnown RBP24.24■■□□□ 1.47
PTPN18-202ENST00000347849 SYKP43405 635 aa24.24■■□□□ 1.47
PTPN18-202ENST00000347849 ETF1P62495 437 aaKnown RBP24.24■■□□□ 1.47
PTPN18-202ENST00000347849 ANKS1AQ92625 1134 aa24.24■■□□□ 1.47
PTPN18-202ENST00000347849 CPVLQ9H3G5 476 aa24.24■■□□□ 1.47
PTPN18-202ENST00000347849 FBXO2Q9UK22 296 aaPredicted RBP24.24■■□□□ 1.47
PTPN18-202ENST00000347849 ERICH4A6NGS2 130 aa24.24■■□□□ 1.47
PTPN18-202ENST00000347849 SLURP2P0DP57 97 aa24.24■■□□□ 1.47
PTPN18-202ENST00000347849 KRT2P35908 639 aa24.24■■□□□ 1.47
PTPN18-202ENST00000347849 JMYQ8N9B5 988 aa24.24■■□□□ 1.47
PTPN18-202ENST00000347849 EYA3Q99504 573 aa24.24■■□□□ 1.47
PTPN18-202ENST00000347849 MAD2L2Q9UI95 211 aa24.24■■□□□ 1.47
PTPN18-202ENST00000347849 PCDHAC2Q9Y5I4 1007 aa24.24■■□□□ 1.47
PTPN18-202ENST00000347849 DDX60LQ5H9U9 1706 aaKnown RBP24.24■■□□□ 1.47
PTPN18-202ENST00000347849 GOLGA8HP0CJ92 632 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 KRI1Q8N9T8 703 aaKnown RBP24.23■■□□□ 1.47
PTPN18-202ENST00000347849 DPF2Q92785 391 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 TNFRSF25Q93038 417 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 HSD3B7Q9H2F3 369 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 FHOD1Q9Y613 1164 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 A0A0U1RQG5 324 aaPredicted RBP24.23■■□□□ 1.47
PTPN18-202ENST00000347849 CUTAO60888 179 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 SERPINC1P01008 464 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 SCG2P13521 617 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 PLCG2P16885 1265 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 UBASH3AP57075 661 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 SLF2Q8IX21 1173 aa24.23■■□□□ 1.47
PTPN18-202ENST00000347849 GPKOWQ92917 476 aaPredicted RBP eCLIP24.23■■□□□ 1.47
PTPN18-202ENST00000347849 CYTH3O43739 400 aa24.22■■□□□ 1.47
PTPN18-202ENST00000347849 XBP1P17861 261 aa24.22■■□□□ 1.47
PTPN18-202ENST00000347849 DHX8Q14562 1220 aaKnown RBP24.22■■□□□ 1.47
PTPN18-202ENST00000347849 PTPN21Q16825 1174 aa24.22■■□□□ 1.47
PTPN18-202ENST00000347849 LONRF3Q496Y0 759 aa24.22■■□□□ 1.47
PTPN18-202ENST00000347849 USP49Q70CQ1 688 aa24.22■■□□□ 1.47
PTPN18-202ENST00000347849 TCP11L1Q9NUJ3 509 aa24.22■■□□□ 1.47
PTPN18-202ENST00000347849 IKBKBO14920 756 aa24.22■■□□□ 1.47
PTPN18-202ENST00000347849 TUBB4AP04350 444 aa24.22■■□□□ 1.47
PTPN18-202ENST00000347849 SLC15A2Q16348 729 aa24.22■■□□□ 1.47
PTPN18-202ENST00000347849 PFKFB3Q16875 520 aaPredicted RBP24.22■■□□□ 1.47
PTPN18-202ENST00000347849 FAM237AA0A1B0GTK4 181 aa24.21■■□□□ 1.47
PTPN18-202ENST00000347849 PTPREP23469 700 aa24.21■■□□□ 1.47
PTPN18-202ENST00000347849 TYW1BQ6NUM6 668 aa24.21■■□□□ 1.47
PTPN18-202ENST00000347849 UBXN4Q92575 508 aa24.21■■□□□ 1.47
PTPN18-202ENST00000347849 GOLGA8FQ08AF8 430 aa24.21■■□□□ 1.47
PTPN18-202ENST00000347849 GOLGA8DPQ0D2H9 430 aa24.21■■□□□ 1.47
PTPN18-202ENST00000347849 GRM4Q14833 912 aa24.21■■□□□ 1.47
PTPN18-202ENST00000347849 CERS3Q8IU89 383 aa24.21■■□□□ 1.47
PTPN18-202ENST00000347849 CAMKK2Q96RR4 588 aa24.21■■□□□ 1.47
PTPN18-202ENST00000347849 ADAMTSL1Q8N6G6 1762 aa24.2■■□□□ 1.47
PTPN18-202ENST00000347849 FOXN1O15353 648 aa24.2■■□□□ 1.46
PTPN18-202ENST00000347849 KIF5BP33176 963 aa24.2■■□□□ 1.46
PTPN18-202ENST00000347849 CFAP100Q494V2 611 aa24.2■■□□□ 1.46
PTPN18-202ENST00000347849 KCNH3Q9ULD8 1083 aa24.2■■□□□ 1.46
PTPN18-202ENST00000347849 CCDC66A2RUB6 948 aa24.2■■□□□ 1.46
PTPN18-202ENST00000347849 G3V3G9 751 aa24.2■■□□□ 1.46
PTPN18-202ENST00000347849 H0YIN7 160 aa24.2■■□□□ 1.46
PTPN18-202ENST00000347849 URI1O94763 535 aaPredicted RBP24.2■■□□□ 1.46
PTPN18-202ENST00000347849 DCAF8Q5TAQ9 597 aa24.2■■□□□ 1.46
PTPN18-202ENST00000347849 TRIM65Q6PJ69 517 aa24.2■■□□□ 1.46
PTPN18-202ENST00000347849 CEP95Q96GE4 821 aa24.2■■□□□ 1.46
PTPN18-202ENST00000347849 CCP110O43303 1012 aa24.19■■□□□ 1.46
PTPN18-202ENST00000347849 PNOCQ13519 176 aa24.19■■□□□ 1.46
PTPN18-202ENST00000347849 NEDD1Q8NHV4 660 aa24.19■■□□□ 1.46
PTPN18-202ENST00000347849 USP40Q9NVE5 1235 aa24.19■■□□□ 1.46
PTPN18-202ENST00000347849 PNMA6AP0CW24 399 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms