RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 C6orf50Q9HD87 102 aa15.04■□□□□ -0
CASC4-202ENST00000345795 POLLQ9UGP5 575 aa15.04■□□□□ -0
CASC4-202ENST00000345795 SYNRGQ9UMZ2 1314 aa15.03■□□□□ -0
CASC4-202ENST00000345795 USP17L15C9J2P7 530 aa15.03■□□□□ -0
CASC4-202ENST00000345795 USP17L13C9JLJ4 530 aa15.03■□□□□ -0
CASC4-202ENST00000345795 USP17L11C9JVI0 530 aa15.03■□□□□ -0
CASC4-202ENST00000345795 USP17L18D6R9N7 530 aa15.03■□□□□ -0
CASC4-202ENST00000345795 USP17L22D6RA61 530 aa15.03■□□□□ -0
CASC4-202ENST00000345795 USP17L17D6RBQ6 530 aa15.03■□□□□ -0
CASC4-202ENST00000345795 USP17L19D6RCP7 530 aa15.03■□□□□ -0
CASC4-202ENST00000345795 USP17L20D6RJB6 530 aa15.03■□□□□ -0
CASC4-202ENST00000345795 MEIS1O00470 390 aa15.03■□□□□ -0
CASC4-202ENST00000345795 HOXA13P31271 388 aaPredicted RBP15.03■□□□□ -0
CASC4-202ENST00000345795 FMR1Q06787 632 aaKnown RBP eCLIP15.03■□□□□ -0
CASC4-202ENST00000345795 USP17L24Q0WX57 530 aa15.03■□□□□ -0
CASC4-202ENST00000345795 AOC3Q16853 763 aa15.03■□□□□ -0
CASC4-202ENST00000345795 USP17L6PQ6QN14 398 aa15.03■□□□□ -0
CASC4-202ENST00000345795 SH2D3AQ9BRG2 576 aa15.03■□□□□ -0
CASC4-202ENST00000345795 CHD2O14647 1828 aaKnown RBP15.03■□□□□ -0
CASC4-202ENST00000345795 ZNF500O60304 480 aaPredicted RBP15.03■□□□□ -0
CASC4-202ENST00000345795 TOB1P50616 345 aaPredicted RBP15.03■□□□□ -0
CASC4-202ENST00000345795 HS1BP3Q53T59 392 aa15.03■□□□□ -0
CASC4-202ENST00000345795 CALML4Q96GE6 196 aa15.03■□□□□ -0
CASC4-202ENST00000345795 ATP8A2Q9NTI2 1148 aa15.03■□□□□ -0
CASC4-202ENST00000345795 TOPAZ1Q8N9V7 1692 aa15.03■□□□□ -0
CASC4-202ENST00000345795 POTEMA6NI47 508 aa15.03■□□□□ -0
CASC4-202ENST00000345795 H0YIN7 160 aa15.03■□□□□ -0
CASC4-202ENST00000345795 TEX33O43247 280 aa15.03■□□□□ -0
CASC4-202ENST00000345795 NFIAQ12857 509 aa15.03■□□□□ -0
CASC4-202ENST00000345795 AXDND1Q5T1B0 1012 aaPredicted RBP15.03■□□□□ -0
CASC4-202ENST00000345795 RBM28Q9NW13 759 aaKnown RBP15.03■□□□□ -0
CASC4-202ENST00000345795 ADAMTS3O15072 1205 aa15.02■□□□□ -0
CASC4-202ENST00000345795 AKR1B1P15121 316 aa15.02■□□□□ -0
CASC4-202ENST00000345795 OGFOD1Q8N543 542 aa15.02■□□□□ -0
CASC4-202ENST00000345795 TBCKQ8TEA7 893 aa15.02■□□□□ -0
CASC4-202ENST00000345795 KIFC2Q96AC6 838 aa15.02■□□□□ -0
CASC4-202ENST00000345795 BAG1Q99933 345 aaPredicted RBP15.02■□□□□ -0
CASC4-202ENST00000345795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.02■□□□□ -0
CASC4-202ENST00000345795 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.02■□□□□ -0
CASC4-202ENST00000345795 MRPS25P82663 173 aaKnown RBP15.02□□□□□ -0.01
CASC4-202ENST00000345795 MTF1Q14872 753 aa15.02□□□□□ -0.01
CASC4-202ENST00000345795 IQCB1Q15051 598 aa15.02□□□□□ -0.01
CASC4-202ENST00000345795 TMTC3Q6ZXV5 915 aa15.02□□□□□ -0.01
CASC4-202ENST00000345795 SLF2Q8IX21 1173 aa15.02□□□□□ -0.01
CASC4-202ENST00000345795 REXO1Q8N1G1 1221 aaKnown RBP15.02□□□□□ -0.01
CASC4-202ENST00000345795 SLF1Q9BQI6 1058 aa15.02□□□□□ -0.01
CASC4-202ENST00000345795 SRRTQ9BXP5 876 aaKnown RBP15.02□□□□□ -0.01
CASC4-202ENST00000345795 ZBTB7AO95365 584 aa15.02□□□□□ -0.01
CASC4-202ENST00000345795 SF3B3Q15393 1217 aaKnown RBP15.02□□□□□ -0.01
CASC4-202ENST00000345795 NTRK3Q16288 839 aa15.02□□□□□ -0.01
CASC4-202ENST00000345795 ANKRD13CQ8N6S4 541 aa15.02□□□□□ -0.01
CASC4-202ENST00000345795 SNX29Q8TEQ0 813 aa15.02□□□□□ -0.01
CASC4-202ENST00000345795 RNF26Q9BY78 433 aaPredicted RBP15.02□□□□□ -0.01
CASC4-202ENST00000345795 FAM207AQ9NSI2 230 aaPredicted RBP15.02□□□□□ -0.01
CASC4-202ENST00000345795 JCADQ9P266 1359 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 CALML3P27482 149 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 GSDMDP57764 484 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 VPS72Q15906 364 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 ERCC6LQ2NKX8 1250 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 NELFBQ8WX92 580 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 FUCA2Q9BTY2 467 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 PRAMEF18Q5VWM3 479 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 DEFB132Q7Z7B7 95 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 FOXP4Q8IVH2 680 aaPredicted RBP15.01□□□□□ -0.01
CASC4-202ENST00000345795 MACROD2A1Z1Q3 448 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 CCDC40Q4G0X9 1142 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 CCDC148Q8NFR7 591 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 TBC1D16Q8TBP0 767 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 TEKT1Q969V4 418 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 CARD6Q9BX69 1037 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 LRWD1Q9UFC0 647 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 BCS1LQ9Y276 419 aa15.01□□□□□ -0.01
CASC4-202ENST00000345795 A0A1W2PQ27 194 aa15□□□□□ -0.01
CASC4-202ENST00000345795 A0A1W2PQ64 194 aa15□□□□□ -0.01
CASC4-202ENST00000345795 A0A1W2PQD8 194 aa15□□□□□ -0.01
CASC4-202ENST00000345795 RHOXF2BP0C7M4 288 aa15□□□□□ -0.01
CASC4-202ENST00000345795 GYS1P13807 737 aa15□□□□□ -0.01
CASC4-202ENST00000345795 CASQ1P31415 396 aa15□□□□□ -0.01
CASC4-202ENST00000345795 TMEM266Q2M3C6 531 aa15□□□□□ -0.01
CASC4-202ENST00000345795 ZNF569Q5MCW4 686 aa15□□□□□ -0.01
CASC4-202ENST00000345795 CACNA2D4Q7Z3S7 1137 aa15□□□□□ -0.01
CASC4-202ENST00000345795 SGMS1Q86VZ5 419 aa15□□□□□ -0.01
CASC4-202ENST00000345795 RDH13Q8NBN7 331 aa15□□□□□ -0.01
CASC4-202ENST00000345795 RHOXF2Q9BQY4 288 aa15□□□□□ -0.01
CASC4-202ENST00000345795 TFR2Q9UP52 801 aa15□□□□□ -0.01
CASC4-202ENST00000345795 KCTD19Q17RG1 926 aaPredicted RBP15□□□□□ -0.01
CASC4-202ENST00000345795 ENGASEQ8NFI3 743 aa15□□□□□ -0.01
CASC4-202ENST00000345795 SLIT3O75094 1523 aa15□□□□□ -0.01
CASC4-202ENST00000345795 NEMFO60524 1076 aa15□□□□□ -0.01
CASC4-202ENST00000345795 TROAPQ12815 778 aa15□□□□□ -0.01
CASC4-202ENST00000345795 NONOQ15233 471 aaKnown RBP eCLIP15□□□□□ -0.01
CASC4-202ENST00000345795 WWC2Q6AWC2 1192 aa15□□□□□ -0.01
CASC4-202ENST00000345795 ATL3Q6DD88 541 aa15□□□□□ -0.01
CASC4-202ENST00000345795 NCAPH2Q6IBW4 605 aa15□□□□□ -0.01
CASC4-202ENST00000345795 CABP7Q86V35 215 aa15□□□□□ -0.01
CASC4-202ENST00000345795 CSGALNACT2Q8N6G5 542 aa15□□□□□ -0.01
CASC4-202ENST00000345795 ZNF384Q8TF68 577 aa15□□□□□ -0.01
CASC4-202ENST00000345795 FAM208AQ9UK61 1670 aaKnown RBP14.99□□□□□ -0.01
CASC4-202ENST00000345795 A0A0U1RQG5 324 aaPredicted RBP14.99□□□□□ -0.01
CASC4-202ENST00000345795 SOWAHDA6NJG2 315 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms