RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 USB1Q9BQ65 265 aaKnown RBP10.72□□□□□ -0.69
ATG4A-202ENST00000345734 ALG1Q9BT22 464 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 MXD3Q9BW11 206 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 ZC3H12CQ9C0D7 883 aaKnown RBP10.72□□□□□ -0.69
ATG4A-202ENST00000345734 COA1Q9GZY4 146 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 FAM205AQ6ZU69 1335 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 NID2Q14112 1375 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 BAZ2BQ9UIF8 2168 aaKnown RBP10.71□□□□□ -0.69
ATG4A-202ENST00000345734 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 KIF28PB7ZC32 967 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 IGSF3O75054 1194 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 PCP11498 1178 aaKnown RBP10.71□□□□□ -0.69
ATG4A-202ENST00000345734 MYH1P12882 1939 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 IARSP41252 1262 aaKnown RBP10.71□□□□□ -0.69
ATG4A-202ENST00000345734 QSER1Q2KHR3 1735 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 Q3C1V9 767 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 CCDC183Q5T5S1 534 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 C12orf60Q5U649 245 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 DEFB132Q7Z7B7 95 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 MAPKAPK5Q8IW41 473 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 SCUBE3Q8IX30 993 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 TMTC2Q8N394 836 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 ANKK1Q8NFD2 765 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 TBC1D22AQ8WUA7 517 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 DYNLL2Q96FJ2 89 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 USP28Q96RU2 1077 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 NOL10Q9BSC4 688 aaKnown RBP10.71□□□□□ -0.69
ATG4A-202ENST00000345734 SLC26A6Q9BXS9 759 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 RBSNQ9H1K0 784 aa10.71□□□□□ -0.69
ATG4A-202ENST00000345734 SAP30BPQ9UHR5 308 aaKnown RBP10.71□□□□□ -0.69
ATG4A-202ENST00000345734 H0YIN7 160 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 HRO43593 1189 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 SLC3A2P08195 630 aaKnown RBP10.7□□□□□ -0.7
ATG4A-202ENST00000345734 LIG1P18858 919 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 GUCY1A2P33402 732 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 SEMA3FQ13275 785 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 IFIT1BQ5T764 474 aaKnown RBP10.7□□□□□ -0.7
ATG4A-202ENST00000345734 CERS5Q8N5B7 392 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 FANCBQ8NB91 859 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 CFAP45Q9UL16 551 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 F8W031 263 aaPredicted RBP10.7□□□□□ -0.7
ATG4A-202ENST00000345734 FMNL1O95466 1100 aaPredicted RBP10.7□□□□□ -0.7
ATG4A-202ENST00000345734 POLR3DP05423 398 aaPredicted RBP10.7□□□□□ -0.7
ATG4A-202ENST00000345734 FBXO45P0C2W1 286 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 IFNAR1P17181 557 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 SSRP1Q08945 709 aaKnown RBP10.7□□□□□ -0.7
ATG4A-202ENST00000345734 LYPD8Q6UX82 237 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 IQCA1Q86XH1 822 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 PCDHB3Q9Y5E6 796 aa10.7□□□□□ -0.7
ATG4A-202ENST00000345734 ADAMTSL1Q8N6G6 1762 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 GAKO14976 1311 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 PLCD1P51178 756 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 RHBDL3P58872 404 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 KIF23Q02241 960 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-202ENST00000345734 PDE4BQ07343 736 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 KRT40Q6A162 431 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 STYK1Q6J9G0 422 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 NBPF11Q86T75 865 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 TEX11Q8IYF3 940 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 ZNF396Q96N95 335 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-202ENST00000345734 TMX4Q9H1E5 349 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-202ENST00000345734 KCNQ5Q9NR82 932 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 RCOR1Q9UKL0 485 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 SCN9AQ15858 1988 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 FOCADQ5VW36 1801 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 DDX60LQ5H9U9 1706 aaKnown RBP10.69□□□□□ -0.7
ATG4A-202ENST00000345734 STK36Q9NRP7 1315 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 GOLGA6L4A6NEF3 574 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 CRACR2BQ8N4Y2 399 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-202ENST00000345734 SLC44A5Q8NCS7 719 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 DAGLAQ9Y4D2 1042 aa10.69□□□□□ -0.7
ATG4A-202ENST00000345734 SOWAHBA6NEL2 793 aa10.68□□□□□ -0.7
ATG4A-202ENST00000345734 TSPY2A6NKD2 308 aa10.68□□□□□ -0.7
ATG4A-202ENST00000345734 PIK3CDO00329 1044 aa10.68□□□□□ -0.7
ATG4A-202ENST00000345734 NASPP49321 788 aaPredicted RBP10.68□□□□□ -0.7
ATG4A-202ENST00000345734 RCAN1P53805 252 aa10.68□□□□□ -0.7
ATG4A-202ENST00000345734 TROAPQ12815 778 aa10.68□□□□□ -0.7
ATG4A-202ENST00000345734 CATIPQ7Z7H3 387 aa10.68□□□□□ -0.7
ATG4A-202ENST00000345734 ROBO3Q96MS0 1386 aa10.68□□□□□ -0.7
ATG4A-202ENST00000345734 FLT1P17948 1338 aa10.68□□□□□ -0.7
ATG4A-202ENST00000345734 CCDC196A0A1B0GTZ2 297 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 PLEKHA8P1O95397 391 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 COPS2P61201 443 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 TFAP4Q01664 338 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 ATL3Q6DD88 541 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 BRICD5Q6PL45 260 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 FBXO41Q8TF61 875 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 TSPY26PQ9H489 355 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 PRDM9Q9NQV7 894 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 IL17RBQ9NRM6 502 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 PRDM4Q9UKN5 801 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 TTF2Q9UNY4 1162 aaKnown RBP10.67□□□□□ -0.7
ATG4A-202ENST00000345734 CLIC4Q9Y696 253 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 CTHP32929 405 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 SCNN1DP51172 638 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 DESI1Q6ICB0 168 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 RCSD1Q6JBY9 416 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 BRAPQ7Z569 592 aa10.67□□□□□ -0.7
ATG4A-202ENST00000345734 CERS3Q8IU89 383 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms