RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 GOLGB1Q14789 3259 aaKnown RBP14.69□□□□□ -0.06
CLK3-201ENST00000345005 AKR1B1P15121 316 aa14.69□□□□□ -0.06
CLK3-201ENST00000345005 SMARCA1P28370 1054 aa14.69□□□□□ -0.06
CLK3-201ENST00000345005 KRT2P35908 639 aa14.69□□□□□ -0.06
CLK3-201ENST00000345005 SLC39A14Q15043 492 aa14.69□□□□□ -0.06
CLK3-201ENST00000345005 DLGAP5Q15398 846 aa14.69□□□□□ -0.06
CLK3-201ENST00000345005 CCAR1Q8IX12 1150 aaKnown RBP14.69□□□□□ -0.06
CLK3-201ENST00000345005 STAG2Q8N3U4 1231 aa14.69□□□□□ -0.06
CLK3-201ENST00000345005 JMYQ8N9B5 988 aa14.69□□□□□ -0.06
CLK3-201ENST00000345005 SH3GLB2Q9NR46 395 aa14.69□□□□□ -0.06
CLK3-201ENST00000345005 DACT1Q9NYF0 836 aa14.69□□□□□ -0.06
CLK3-201ENST00000345005 PCDHA7Q9UN72 937 aa14.69□□□□□ -0.06
CLK3-201ENST00000345005 ATRNL1Q5VV63 1379 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 A0A1W2PQ27 194 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 A0A1W2PQ64 194 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 A0A1W2PQD8 194 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 hCG_1642624A0A1W2PR95 340 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 DDTLA6NHG4 134 aaPredicted RBP14.68□□□□□ -0.06
CLK3-201ENST00000345005 SPDYE2BA6NHP3 402 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 TTLL1O95922 423 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 SPDYE6P0CI01 402 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 CDC25BP30305 580 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 MMP14P50281 582 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 PLCB2Q00722 1185 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 TYRO3Q06418 890 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 RILPL1Q5EBL4 403 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 CCDC73Q6ZRK6 1079 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 RBM43Q6ZSC3 357 aaKnown RBP14.68□□□□□ -0.06
CLK3-201ENST00000345005 TNMDQ9H2S6 317 aa14.68□□□□□ -0.06
CLK3-201ENST00000345005 KLRF2D3W0D1 207 aa14.67□□□□□ -0.06
CLK3-201ENST00000345005 CTAGE5O15320 804 aa14.67□□□□□ -0.06
CLK3-201ENST00000345005 PPP6R2O75170 966 aa14.67□□□□□ -0.06
CLK3-201ENST00000345005 CXCL9Q07325 125 aa14.67□□□□□ -0.06
CLK3-201ENST00000345005 DHX8Q14562 1220 aaKnown RBP14.67□□□□□ -0.06
CLK3-201ENST00000345005 METTL16Q86W50 562 aaKnown RBP14.67□□□□□ -0.06
CLK3-201ENST00000345005 FAM177A1Q8N128 213 aaPredicted RBP14.67□□□□□ -0.06
CLK3-201ENST00000345005 MTMR14Q8NCE2 650 aa14.67□□□□□ -0.06
CLK3-201ENST00000345005 SPZ1Q9BXG8 430 aa14.67□□□□□ -0.06
CLK3-201ENST00000345005 MPHOSPH10O00566 681 aaKnown RBP14.66□□□□□ -0.06
CLK3-201ENST00000345005 CALML3P27482 149 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 TNIP1Q15025 636 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 CIAPIN1Q6FI81 312 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 SH3BP5LQ7L8J4 393 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 ANKRD7Q92527 254 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 CLSTN2Q9H4D0 955 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 CLIP2Q9UDT6 1046 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 MTMR7Q9Y216 660 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 BCS1LQ9Y276 419 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 SMTNL1A8MU46 457 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 NR1I2O75469 434 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 PTPAQ15257 358 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 CERKLQ49MI3 558 aaPredicted RBP14.66□□□□□ -0.06
CLK3-201ENST00000345005 TATDN1Q6P1N9 297 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 FSIP1Q8NA03 581 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 OXER1Q8TDS5 423 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 MRPS27Q92552 414 aaKnown RBP14.66□□□□□ -0.06
CLK3-201ENST00000345005 SHISA4Q96DD7 197 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.66□□□□□ -0.06
CLK3-201ENST00000345005 ZNF70Q9UC06 446 aaPredicted RBP14.66□□□□□ -0.06
CLK3-201ENST00000345005 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
CLK3-201ENST00000345005 LTBP3Q9NS15 1303 aa14.66□□□□□ -0.06
CLK3-201ENST00000345005 NFKBIEO00221 500 aa14.65□□□□□ -0.06
CLK3-201ENST00000345005 NLRP5P59047 1200 aa14.65□□□□□ -0.06
CLK3-201ENST00000345005 FAM160A1Q05DH4 1040 aa14.65□□□□□ -0.06
CLK3-201ENST00000345005 NR5A1Q13285 461 aa14.65□□□□□ -0.06
CLK3-201ENST00000345005 ASPRV1Q53RT3 343 aa14.65□□□□□ -0.06
CLK3-201ENST00000345005 FKBP1CQ5VVH2 108 aa14.65□□□□□ -0.06
CLK3-201ENST00000345005 ZNF710Q8N1W2 664 aa14.65□□□□□ -0.06
CLK3-201ENST00000345005 DNAJC18Q9H819 358 aa14.65□□□□□ -0.06
CLK3-201ENST00000345005 CEP131Q9UPN4 1083 aa14.65□□□□□ -0.06
CLK3-201ENST00000345005 USP17L5A8MUK1 530 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 PDHBP11177 359 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 CMA1P23946 247 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 TOB1P50616 345 aaPredicted RBP14.64□□□□□ -0.07
CLK3-201ENST00000345005 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 GALNT17Q6IS24 598 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 USP17L2Q6R6M4 530 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 FAM151AQ8WW52 585 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 KCNF1Q9H3M0 494 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 KANSL2Q9H9L4 492 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 CABP5Q9NP86 173 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 MRVI1Q9Y6F6 885 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 CYTH3O43739 400 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 MYO1BO43795 1136 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 GOLGA8HP0CJ92 632 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 SNHG28P0DPA3 235 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 AXDND1Q5T1B0 1012 aaPredicted RBP14.64□□□□□ -0.07
CLK3-201ENST00000345005 DRC7Q8IY82 874 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 ENGASEQ8NFI3 743 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 CCDC148Q8NFR7 591 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 RRP36Q96EU6 259 aaKnown RBP14.64□□□□□ -0.07
CLK3-201ENST00000345005 FHDC1Q9C0D6 1143 aaPredicted RBP14.64□□□□□ -0.07
CLK3-201ENST00000345005 GOLPH3LQ9H4A5 285 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 NYAP2Q9P242 653 aa14.64□□□□□ -0.07
CLK3-201ENST00000345005 HERC5Q9UII4 1024 aaKnown RBP14.64□□□□□ -0.07
CLK3-201ENST00000345005 TCP10L2B9ZVM9 353 aa14.63□□□□□ -0.07
CLK3-201ENST00000345005 RIOK3O14730 519 aaKnown RBP14.63□□□□□ -0.07
CLK3-201ENST00000345005 KINO60870 393 aaKnown RBP14.63□□□□□ -0.07
CLK3-201ENST00000345005 MARCKSP29966 332 aaPredicted RBP14.63□□□□□ -0.07
CLK3-201ENST00000345005 EIF6P56537 245 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms