RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SLC35G1Q2M3R5 365 aa16.9■□□□□ 0.3
VIPAS39-202ENST00000343765 BAG1Q99933 345 aaPredicted RBP16.9■□□□□ 0.3
VIPAS39-202ENST00000343765 MAST2Q6P0Q8 1798 aa16.9■□□□□ 0.3
VIPAS39-202ENST00000343765 CALML3P27482 149 aa16.9■□□□□ 0.3
VIPAS39-202ENST00000343765 CUL4BQ13620 913 aa16.9■□□□□ 0.3
VIPAS39-202ENST00000343765 ELF2Q15723 593 aa16.9■□□□□ 0.3
VIPAS39-202ENST00000343765 TMEM139Q8IV31 216 aa16.9■□□□□ 0.3
VIPAS39-202ENST00000343765 IQUBQ8NA54 791 aa16.9■□□□□ 0.3
VIPAS39-202ENST00000343765 TBX2Q13207 712 aaPredicted RBP16.89■□□□□ 0.3
VIPAS39-202ENST00000343765 GRM4Q14833 912 aa16.89■□□□□ 0.3
VIPAS39-202ENST00000343765 WWC2Q6AWC2 1192 aa16.89■□□□□ 0.3
VIPAS39-202ENST00000343765 CREBRFQ8IUR6 639 aa16.89■□□□□ 0.3
VIPAS39-202ENST00000343765 TC2NQ8N9U0 490 aa16.89■□□□□ 0.3
VIPAS39-202ENST00000343765 LRRN4CLQ8ND94 238 aa16.89■□□□□ 0.3
VIPAS39-202ENST00000343765 GSDMAQ96QA5 445 aa16.89■□□□□ 0.3
VIPAS39-202ENST00000343765 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.3
VIPAS39-202ENST00000343765 PRDM10Q9NQV6 1147 aa16.89■□□□□ 0.3
VIPAS39-202ENST00000343765 PCDHA4Q9UN74 947 aa16.89■□□□□ 0.3
VIPAS39-202ENST00000343765 CCDC194A0A1B0GVG4 234 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 CYTH3O43739 400 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 SLU7O95391 586 aaKnown RBP16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 TRAPPC10P48553 1259 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 KARSQ15046 597 aaKnown RBP16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 E2F4Q16254 413 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 MEX3CQ5U5Q3 659 aaKnown RBP16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 SPATA1Q5VX52 437 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 RASSF8Q8NHQ8 419 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 CPLX3Q8WVH0 158 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 MTRQ99707 1265 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 TMEM47Q9BQJ4 181 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 CD209Q9NNX6 404 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 MORC2Q9Y6X9 1032 aaPredicted RBP16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 PP2D1A8MPX8 630 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 PPP1R3GB7ZBB8 358 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 RASA1P20936 1047 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 SYCP1Q15431 976 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 RRAGBQ5VZM2 374 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 TEX11Q8IYF3 940 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 PLIN2Q99541 437 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 MAPK8IP1Q9UQF2 711 aa16.89■□□□□ 0.29
VIPAS39-202ENST00000343765 ARHGAP6O43182 974 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 NR1I3Q14994 352 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 INF2Q27J81 1249 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 TOGARAM2Q6ZUX3 1019 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 PPP2R2CQ9Y2T4 447 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 CCP110O43303 1012 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 LDHCP07864 332 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 ETF1P62495 437 aaKnown RBP16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 PDXDC2PQ6P474 469 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 REXO1L1PQ8IX06 675 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 ERO1AQ96HE7 468 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 DESI2Q9BSY9 194 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 GGA1Q9UJY5 639 aa16.88■□□□□ 0.29
VIPAS39-202ENST00000343765 SBF2Q86WG5 1849 aa16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 A0A1B0GTH6 734 aa16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 CCT6AP40227 531 aaKnown RBP16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 SERPINB2P05120 415 aa16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 PPP4CP60510 307 aa16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 MFSD14BQ5SR56 506 aa16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 EYA3Q99504 573 aa16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 TMEM60Q9H2L4 133 aa16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 VAT1LQ9HCJ6 419 aa16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 PCDHA6Q9UN73 950 aa16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 PCDHA8Q9Y5H6 950 aa16.87■□□□□ 0.29
VIPAS39-202ENST00000343765 STAT6P42226 847 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 CDK8P49336 464 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 GNAQP50148 359 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 ST5P78524 1137 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 TMED8Q6PL24 325 aaPredicted RBP16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 APTXQ7Z2E3 356 aaKnown RBP16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 C4orf32Q8N8J7 132 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 CGNQ9P2M7 1197 aaKnown RBP16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 ROBO3Q96MS0 1386 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 KLRF2D3W0D1 207 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 FANCGO15287 622 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 TXLNAP40222 546 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 MTF1Q14872 753 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 TRIM65Q6PJ69 517 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 USP17L2Q6R6M4 530 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 IGSF22Q8N9C0 903 aa16.86■□□□□ 0.29
VIPAS39-202ENST00000343765 C6orf229H3BNL8 230 aa16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 STXBP3O00186 592 aa16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 ZSCAN12O43309 604 aa16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 GYS1P13807 737 aa16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 ANKS1AQ92625 1134 aa16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 SH3GLB2Q9NR46 395 aa16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 GDAQ9Y2T3 454 aa16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 URI1O94763 535 aaPredicted RBP16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 DTHD1Q6ZMT9 781 aa16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 POLLQ9UGP5 575 aa16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 TAF1LQ8IZX4 1826 aa16.85■□□□□ 0.29
VIPAS39-202ENST00000343765 FLT1P17948 1338 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 AKR1B15C9JRZ8 316 aaPredicted RBP16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 LONP1P36776 959 aaKnown RBP16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 RBL2Q08999 1139 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 ERCC6LQ2NKX8 1250 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms