RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 SPDYE16A6NNV3 312 aaPredicted RBP21.41■■□□□ 1.02
USF2-202ENST00000343550 CHMLP26374 656 aa21.41■■□□□ 1.02
USF2-202ENST00000343550 WDR78Q5VTH9 848 aa21.41■■□□□ 1.02
USF2-202ENST00000343550 ZNF287Q9HBT7 754 aa21.41■■□□□ 1.02
USF2-202ENST00000343550 SLC3A2P08195 630 aaKnown RBP21.4■■□□□ 1.02
USF2-202ENST00000343550 COG2Q14746 738 aa21.4■■□□□ 1.02
USF2-202ENST00000343550 ZNF444Q8N0Y2 327 aaPredicted RBP21.4■■□□□ 1.02
USF2-202ENST00000343550 PPP4R2Q9NY27 417 aa21.4■■□□□ 1.02
USF2-202ENST00000343550 HOXC10Q9NYD6 342 aa21.4■■□□□ 1.02
USF2-202ENST00000343550 ANAPC4Q9UJX5 808 aa21.4■■□□□ 1.02
USF2-202ENST00000343550 MYH8P13535 1937 aa21.4■■□□□ 1.02
USF2-202ENST00000343550 SLC15A5A6NIM6 579 aa21.39■■□□□ 1.02
USF2-202ENST00000343550 PRDM1O75626 825 aa21.39■■□□□ 1.02
USF2-202ENST00000343550 PTPREP23469 700 aa21.39■■□□□ 1.02
USF2-202ENST00000343550 PDE4BQ07343 736 aa21.39■■□□□ 1.02
USF2-202ENST00000343550 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.39■■□□□ 1.02
USF2-202ENST00000343550 C11orf49Q9H6J7 331 aa21.39■■□□□ 1.02
USF2-202ENST00000343550 CCND3P30281 292 aaPredicted RBP21.39■■□□□ 1.01
USF2-202ENST00000343550 CTDSPL2Q05D32 466 aa21.39■■□□□ 1.01
USF2-202ENST00000343550 TANGO6Q9C0B7 1094 aa21.39■■□□□ 1.01
USF2-202ENST00000343550 IL25Q9H293 177 aa21.39■■□□□ 1.01
USF2-202ENST00000343550 KANSL2Q9H9L4 492 aa21.39■■□□□ 1.01
USF2-202ENST00000343550 INCENPQ9NQS7 918 aa21.39■■□□□ 1.01
USF2-202ENST00000343550 IVNS1ABPQ9Y6Y0 642 aa21.39■■□□□ 1.01
USF2-202ENST00000343550 LHX8Q68G74 356 aa21.38■■□□□ 1.01
USF2-202ENST00000343550 CLEC10AQ8IUN9 316 aa21.38■■□□□ 1.01
USF2-202ENST00000343550 TACC3Q9Y6A5 838 aa21.38■■□□□ 1.01
USF2-202ENST00000343550 ZMYM6O95789 1325 aa21.38■■□□□ 1.01
USF2-202ENST00000343550 GRB14Q14449 540 aa21.37■■□□□ 1.01
USF2-202ENST00000343550 KIAA1755Q5JYT7 1200 aa21.37■■□□□ 1.01
USF2-202ENST00000343550 MFSD14CQ5VZR4 134 aa21.37■■□□□ 1.01
USF2-202ENST00000343550 C7orf61Q8IZ16 206 aa21.37■■□□□ 1.01
USF2-202ENST00000343550 RUFY2Q8WXA3 655 aa21.37■■□□□ 1.01
USF2-202ENST00000343550 LPAR1Q92633 364 aa21.37■■□□□ 1.01
USF2-202ENST00000343550 ARHGEF10LQ9HCE6 1279 aa21.37■■□□□ 1.01
USF2-202ENST00000343550 FLRT1Q9NZU1 646 aa21.37■■□□□ 1.01
USF2-202ENST00000343550 SZT2Q5T011 3432 aa21.37■■□□□ 1.01
USF2-202ENST00000343550 HOXC6P09630 235 aa21.36■■□□□ 1.01
USF2-202ENST00000343550 FGRP09769 529 aa21.36■■□□□ 1.01
USF2-202ENST00000343550 EEF2P13639 858 aaKnown RBP21.36■■□□□ 1.01
USF2-202ENST00000343550 ICA1Q05084 483 aa21.36■■□□□ 1.01
USF2-202ENST00000343550 DSCC1Q9BVC3 393 aa21.36■■□□□ 1.01
USF2-202ENST00000343550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.36■■□□□ 1.01
USF2-202ENST00000343550 TMX2Q9Y320 296 aa21.36■■□□□ 1.01
USF2-202ENST00000343550 ATP2B2Q01814 1243 aa21.35■■□□□ 1.01
USF2-202ENST00000343550 BMP2KLQ5H9B9 411 aa21.35■■□□□ 1.01
USF2-202ENST00000343550 MOV10L1Q9BXT6 1211 aaKnown RBP21.35■■□□□ 1.01
USF2-202ENST00000343550 SH2D4AQ9H788 454 aa21.35■■□□□ 1.01
USF2-202ENST00000343550 IGKV6D-41A0A0C4DH26 115 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 A0A1W2PPC1 479 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 FAM47AQ5JRC9 791 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 SPICE1Q8N0Z3 855 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 NPLOC4Q8TAT6 608 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 SPATC1LQ9H0A9 340 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 PFASO15067 1338 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 STRNO43815 780 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 COL6A1P12109 1028 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 DSG3P32926 999 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 HAND2P61296 217 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 TFAP4Q01664 338 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 MB21D1Q8N884 522 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 NEDD1Q8NHV4 660 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 VCPKMTQ9H867 229 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 ZMYND8Q9ULU4 1186 aaPredicted RBP21.34■■□□□ 1.01
USF2-202ENST00000343550 RAD50Q92878 1312 aa21.34■■□□□ 1.01
USF2-202ENST00000343550 SGSM2O43147 1006 aa21.33■■□□□ 1
USF2-202ENST00000343550 FLOT1O75955 427 aa21.33■■□□□ 1
USF2-202ENST00000343550 TSPY3P0CV98 308 aa21.33■■□□□ 1
USF2-202ENST00000343550 TSPY8P0CW00 308 aa21.33■■□□□ 1
USF2-202ENST00000343550 DPP9Q86TI2 863 aa21.33■■□□□ 1
USF2-202ENST00000343550 SHCBP1Q8NEM2 672 aa21.33■■□□□ 1
USF2-202ENST00000343550 NYAP2Q9P242 653 aa21.33■■□□□ 1
USF2-202ENST00000343550 ALPK3Q96L96 1907 aa21.33■■□□□ 1
USF2-202ENST00000343550 ZNF213O14771 459 aa21.32■■□□□ 1
USF2-202ENST00000343550 ORC4O43929 436 aa21.32■■□□□ 1
USF2-202ENST00000343550 ERCC3P19447 782 aa21.32■■□□□ 1
USF2-202ENST00000343550 GDF15Q99988 308 aa21.32■■□□□ 1
USF2-202ENST00000343550 GREB1LQ9C091 1923 aaPredicted RBP21.32■■□□□ 1
USF2-202ENST00000343550 MTMR4Q9NYA4 1195 aa21.32■■□□□ 1
USF2-202ENST00000343550 IGHA2P01877 340 aa21.31■■□□□ 1
USF2-202ENST00000343550 ADORA2AP29274 412 aa21.31■■□□□ 1
USF2-202ENST00000343550 CNGA1P29973 690 aa21.31■■□□□ 1
USF2-202ENST00000343550 CYP2C19P33261 490 aa21.31■■□□□ 1
USF2-202ENST00000343550 PLS1Q14651 629 aa21.31■■□□□ 1
USF2-202ENST00000343550 MKL1Q969V6 931 aa21.31■■□□□ 1
USF2-202ENST00000343550 ATG4CQ96DT6 458 aa21.31■■□□□ 1
USF2-202ENST00000343550 CEP95Q96GE4 821 aa21.31■■□□□ 1
USF2-202ENST00000343550 CLIP2Q9UDT6 1046 aa21.31■■□□□ 1
USF2-202ENST00000343550 DDX20Q9UHI6 824 aaKnown RBP21.31■■□□□ 1
USF2-202ENST00000343550 CTNNA3Q9UI47 895 aa21.31■■□□□ 1
USF2-202ENST00000343550 WDR46O15213 610 aaKnown RBP21.3■■□□□ 1
USF2-202ENST00000343550 RANBP6O60518 1105 aaKnown RBP21.3■■□□□ 1
USF2-202ENST00000343550 SYN1P17600 705 aa21.3■■□□□ 1
USF2-202ENST00000343550 BMP8BP34820 402 aa21.3■■□□□ 1
USF2-202ENST00000343550 PTH1RQ03431 593 aa21.3■■□□□ 1
USF2-202ENST00000343550 AKNAD1Q5T1N1 836 aa21.3■■□□□ 1
USF2-202ENST00000343550 MFSD6Q6ZSS7 791 aa21.3■■□□□ 1
USF2-202ENST00000343550 MROH8Q9H579 483 aa21.3■■□□□ 1
USF2-202ENST00000343550 TSPY2A6NKD2 308 aa21.29■■□□□ 1
USF2-202ENST00000343550 MSCO60682 206 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms