RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 PDE8BO95263 885 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 PPP1R2P41236 205 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 SLC9C1Q4G0N8 1177 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 AP1ARQ63HQ0 302 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 SND1Q7KZF4 910 aaKnown RBP eCLIP8.95□□□□□ -0.98
UBE4B-202ENST00000343090 MRRFQ96E11 262 aaKnown RBP8.95□□□□□ -0.98
UBE4B-202ENST00000343090 EYA3Q99504 573 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 NUP58Q9BVL2 599 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 MED23Q9ULK4 1368 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 SPOPO43791 374 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 PTGDRQ13258 359 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 APOA5Q6Q788 366 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 SRLQ86TD4 932 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 CCDC77Q9BR77 488 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 IFIH1Q9BYX4 1025 aaKnown RBP8.95□□□□□ -0.98
UBE4B-202ENST00000343090 SEC31BQ9NQW1 1179 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 GJB4Q9NTQ9 266 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.95□□□□□ -0.98
UBE4B-202ENST00000343090 PHLPP2Q6ZVD8 1323 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 CDK12Q9NYV4 1490 aaPredicted RBP8.95□□□□□ -0.98
UBE4B-202ENST00000343090 CLTCL1P53675 1640 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 KLHL30Q0D2K2 578 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 NECTIN1Q15223 517 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 TTC16Q8NEE8 873 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 RBM6P78332 1123 aaKnown RBP8.94□□□□□ -0.98
UBE4B-202ENST00000343090 BIRC3Q13489 604 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 HAUS3Q68CZ6 603 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 PNMA1Q8ND90 353 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 FBF1Q8TES7 1133 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 DNAI2Q9GZS0 605 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 IQCGQ9H095 443 aaKnown RBP8.94□□□□□ -0.98
UBE4B-202ENST00000343090 MED4Q9NPJ6 270 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 MAP3K15Q6ZN16 1313 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 HGSO14964 777 aaPredicted RBP8.94□□□□□ -0.98
UBE4B-202ENST00000343090 GCNT3O95395 438 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 PEX19P40855 299 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 CALCOCO2Q13137 446 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 SLC39A14Q15043 492 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 CCDC144BQ3MJ40 725 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 SEL1L2Q5TEA6 688 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 NBPF14Q5TI25 921 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 ANKS4BQ8N8V4 417 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 TMEM87AQ8NBN3 555 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 RDH13Q8NBN7 331 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 RASGRP4Q8TDF6 673 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 MTRF1LQ9UGC7 380 aaKnown RBP8.94□□□□□ -0.98
UBE4B-202ENST00000343090 EPHA10Q5JZY3 1008 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 LRRC47Q8N1G4 583 aaKnown RBP8.94□□□□□ -0.98
UBE4B-202ENST00000343090 MYCT1Q8N699 235 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 CCDC26Q8TAB7 109 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 ARPP21Q9UBL0 812 aaPredicted RBP8.94□□□□□ -0.98
UBE4B-202ENST00000343090 ZBTB1Q9Y2K1 713 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 CEP83Q9Y592 693 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 NCOA3Q9Y6Q9 1424 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 SHROOM2Q13796 1616 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 CALUO43852 315 aaPredicted RBP8.94□□□□□ -0.98
UBE4B-202ENST00000343090 CFBP00751 764 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 SCG2P13521 617 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 DYNLL1P63167 89 aaKnown RBP8.94□□□□□ -0.98
UBE4B-202ENST00000343090 GTF2IP78347 998 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 NR5A1Q13285 461 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 TADA2BQ86TJ2 420 aa8.94□□□□□ -0.98
UBE4B-202ENST00000343090 LMTK3Q96Q04 1460 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 RESTQ13127 1097 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 SFMBT2Q5VUG0 894 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 TTC19Q6DKK2 380 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-202ENST00000343090 ARFGAP2Q8N6H7 521 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 OR8K1Q8NGG5 319 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 NAP1L4Q99733 375 aaKnown RBP8.93□□□□□ -0.98
UBE4B-202ENST00000343090 CAPS2Q9BXY5 557 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 MRPL44Q9H9J2 332 aaKnown RBP8.93□□□□□ -0.98
UBE4B-202ENST00000343090 SLC39A2Q9NP94 309 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 A0A1W2PQ27 194 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 A0A1W2PQ64 194 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 A0A1W2PQD8 194 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 BUB1O43683 1085 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 MYCLP12524 364 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-202ENST00000343090 KCNQ4P56696 695 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 KIF23Q02241 960 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-202ENST00000343090 UBE3CQ15386 1083 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 VWA3BQ502W6 1294 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 MFSD14BQ5SR56 506 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 LINC00301Q8NCQ3 95 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 N4BP2L2Q92802 583 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-202ENST00000343090 PSMD1Q99460 953 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 LSM14BQ9BX40 385 aaKnown RBP8.93□□□□□ -0.98
UBE4B-202ENST00000343090 MTUS1Q9ULD2 1270 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 DNM3Q9UQ16 869 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 SAR1BQ9Y6B6 198 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 NLRP1Q9C000 1473 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 PLEKHG1Q9ULL1 1385 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 CDC42BPAQ5VT25 1732 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 VIMP08670 466 aaKnown RBP8.93□□□□□ -0.98
UBE4B-202ENST00000343090 CASP14P31944 242 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 MXRA7P84157 204 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 CC2D1AQ6P1N0 951 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-202ENST00000343090 DPP8Q6V1X1 898 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-202ENST00000343090 IFT20Q8IY31 132 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 CPXCR1Q8N123 301 aa8.93□□□□□ -0.98
UBE4B-202ENST00000343090 STMN4Q9H169 189 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms