RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ABCA9Q8IUA7 1624 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 LMTK3Q96Q04 1460 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 PPRC1Q5VV67 1664 aaKnown RBP8.01□□□□□ -1.13
VCAN-202ENST00000342785 ZNF804BA4D1E1 1349 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 CTNNA2P26232 953 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 EXOSC10Q01780 885 aaKnown RBP8.01□□□□□ -1.13
VCAN-202ENST00000342785 KLHL30Q0D2K2 578 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 VWA3BQ502W6 1294 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 SND1Q7KZF4 910 aaKnown RBP eCLIP8.01□□□□□ -1.135e-7■■■■■ 28.2
VCAN-202ENST00000342785 BICD1Q96G01 975 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 CDC23Q9UJX2 597 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 SRPRBQ9Y5M8 271 aaKnown RBP8.01□□□□□ -1.13
VCAN-202ENST00000342785 RFX7Q2KHR2 1363 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 RPAP1Q9BWH6 1393 aaPredicted RBP8.01□□□□□ -1.13
VCAN-202ENST00000342785 GBP2P32456 591 aaPredicted RBP8.01□□□□□ -1.13
VCAN-202ENST00000342785 RABGGTAQ92696 567 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 HDAC9Q9UKV0 1011 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 BRINP3Q76B58 766 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 C10orf67Q8IYJ2 551 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 CCDC155Q8N6L0 562 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 NEXMIFQ5QGS0 1516 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 FOXO4P98177 505 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 HOOK3Q86VS8 718 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 KCNQ4P56696 695 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 ANKRD13CQ8N6S4 541 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 SEMA3EO15041 775 aa8□□□□□ -1.13
VCAN-202ENST00000342785 CHMP2AO43633 222 aa8□□□□□ -1.13
VCAN-202ENST00000342785 MNAT1P51948 309 aa8□□□□□ -1.13
VCAN-202ENST00000342785 GALNT17Q6IS24 598 aa8□□□□□ -1.13
VCAN-202ENST00000342785 RPGRIP1Q96KN7 1286 aa8□□□□□ -1.13
VCAN-202ENST00000342785 EPB41P11171 864 aaKnown RBP8□□□□□ -1.13
VCAN-202ENST00000342785 NAA30Q147X3 362 aaPredicted RBP8□□□□□ -1.13
VCAN-202ENST00000342785 NCAPH2Q6IBW4 605 aa8□□□□□ -1.13
VCAN-202ENST00000342785 CYB5R4Q7L1T6 521 aa8□□□□□ -1.13
VCAN-202ENST00000342785 PLA2G4DQ86XP0 818 aa8□□□□□ -1.13
VCAN-202ENST00000342785 AFAP1L1Q8TED9 768 aa8□□□□□ -1.13
VCAN-202ENST00000342785 SLC39A2Q9NP94 309 aa8□□□□□ -1.13
VCAN-202ENST00000342785 PKD2L1Q9P0L9 805 aa8□□□□□ -1.13
VCAN-202ENST00000342785 QRICH2Q9H0J4 1663 aa8□□□□□ -1.13
VCAN-202ENST00000342785 PRPF3O43395 683 aaKnown RBP8□□□□□ -1.13
VCAN-202ENST00000342785 BBXQ8WY36 941 aaPredicted RBP8□□□□□ -1.13
VCAN-202ENST00000342785 DNM3Q9UQ16 869 aa8□□□□□ -1.13
VCAN-202ENST00000342785 SALL3Q9BXA9 1300 aa8□□□□□ -1.13
VCAN-202ENST00000342785 DESP17661 470 aa8□□□□□ -1.13
VCAN-202ENST00000342785 SLC35F6Q8N357 371 aa8□□□□□ -1.13
VCAN-202ENST00000342785 ZBTB21Q9ULJ3 1066 aa8□□□□□ -1.13
VCAN-202ENST00000342785 CEMIPQ8WUJ3 1361 aa8□□□□□ -1.13
VCAN-202ENST00000342785 CEP104O60308 925 aa8□□□□□ -1.13
VCAN-202ENST00000342785 CDC27P30260 824 aa8□□□□□ -1.13
VCAN-202ENST00000342785 TCP10Q12799 353 aa8□□□□□ -1.13
VCAN-202ENST00000342785 DPP8Q6V1X1 898 aaPredicted RBP8□□□□□ -1.13
VCAN-202ENST00000342785 MYOCDQ8IZQ8 938 aa8□□□□□ -1.13
VCAN-202ENST00000342785 SCLT1Q96NL6 688 aa8□□□□□ -1.13
VCAN-202ENST00000342785 TUBGCP2Q9BSJ2 902 aa8□□□□□ -1.13
VCAN-202ENST00000342785 TCHPQ9BT92 498 aa8□□□□□ -1.13
VCAN-202ENST00000342785 ADAMTS13Q76LX8 1427 aa8□□□□□ -1.13
VCAN-202ENST00000342785 GOLGA6BA6NDN3 693 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 RBL2Q08999 1139 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 RGS22Q8NE09 1264 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 NT5C3AQ9H0P0 336 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 RASAL2Q9UJF2 1139 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 PARP3Q9Y6F1 533 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 BTDP43251 543 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 IQCDQ96DY2 449 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 KAZALD1Q96I82 304 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 PCDHA12Q9UN75 941 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 GOLGA6CA6NDK9 693 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 GOLGA6DP0CG33 693 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 NCBP1Q09161 790 aaKnown RBP7.99□□□□□ -1.13
VCAN-202ENST00000342785 FAM26FQ5R3K3 315 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 SFMBT2Q5VUG0 894 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 SRGAP1Q7Z6B7 1085 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 LRRC47Q8N1G4 583 aaKnown RBP7.99□□□□□ -1.13
VCAN-202ENST00000342785 MICALL1Q8N3F8 863 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 TRIM58Q8NG06 486 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 GOLGA6AQ9NYA3 693 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 INO80Q9ULG1 1556 aaPredicted RBP7.99□□□□□ -1.13
VCAN-202ENST00000342785 TMEM110-MUSTN1A8MSY1 372 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 PDIA6Q15084 440 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 ASIC2Q16515 512 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 ERFEQ4G0M1 354 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 OSBPL5Q9H0X9 879 aaPredicted RBP7.99□□□□□ -1.13
VCAN-202ENST00000342785 USP40Q9NVE5 1235 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 FRMD4BQ9Y2L6 1034 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 RFX5P48382 616 aaPredicted RBP7.99□□□□□ -1.13
VCAN-202ENST00000342785 IQCB1Q15051 598 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 FBXO38Q6PIJ6 1188 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 OTUD6BQ8N6M0 293 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 NDUFAB1O14561 156 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 PLEKHA8P1O95397 391 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 DIXDC1Q155Q3 683 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 CFAP221Q4G0U5 840 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 RESP18Q5W5W9 173 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 KLHL7Q8IXQ5 586 aa7.99□□□□□ -1.13
VCAN-202ENST00000342785 DLC1Q96QB1 1528 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 TNFAIP3P21580 790 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 EEF1GP26641 437 aaKnown RBP7.98□□□□□ -1.13
VCAN-202ENST00000342785 IFT20Q8IY31 132 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 PLCD4Q9BRC7 762 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 NUCKS1Q9H1E3 243 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms