RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 PDE4DQ08499 809 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 SYMPKQ92797 1274 aaKnown RBP13.12□□□□□ -0.31
TRAK1-202ENST00000341421 TAB2Q9NYJ8 693 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 TADA3O75528 432 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 TEX11Q8IYF3 940 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 MMRN2Q9H8L6 949 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 LY9Q9HBG7 655 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 hCG_1642624A0A1W2PR95 340 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 CTDNEP1O95476 244 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 BRD2P25440 801 aaKnown RBP13.11□□□□□ -0.31
TRAK1-202ENST00000341421 GYS2P54840 703 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 PTGDRQ13258 359 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 SCARF1Q14162 830 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 NF2P35240 595 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 NOC4LQ9BVI4 516 aaKnown RBP13.11□□□□□ -0.31
TRAK1-202ENST00000341421 AGXT2Q9BYV1 514 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 MED4Q9NPJ6 270 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 FER1L4A9Z1Z3 1794 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 EIF3CLB5ME19 914 aaKnown RBP13.11□□□□□ -0.31
TRAK1-202ENST00000341421 GNPATO15228 680 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
TRAK1-202ENST00000341421 E4F1Q66K89 784 aaPredicted RBP13.11□□□□□ -0.31
TRAK1-202ENST00000341421 FAM76AQ8TAV0 307 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 EIF3CQ99613 913 aaKnown RBP13.11□□□□□ -0.31
TRAK1-202ENST00000341421 SEC31BQ9NQW1 1179 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 KDM6AO15550 1401 aaPredicted RBP13.11□□□□□ -0.31
TRAK1-202ENST00000341421 PRKAB2O43741 272 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 MORC3Q14149 939 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 STXBP4Q6ZWJ1 553 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAK1-202ENST00000341421 EHMT1Q9H9B1 1298 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 MAGEF1Q9HAY2 307 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
TRAK1-202ENST00000341421 PSD3Q9NYI0 1048 aa13.11□□□□□ -0.31
TRAK1-202ENST00000341421 A0A087WUV0 522 aaPredicted RBP13.1□□□□□ -0.31
TRAK1-202ENST00000341421 ST3GAL1Q11201 340 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 NR5A1Q13285 461 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 ENOX2Q16206 610 aaKnown RBP13.1□□□□□ -0.31
TRAK1-202ENST00000341421 WHAMMP3Q1A5X7 153 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 ENGASEQ8NFI3 743 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 OR8K1Q8NGG5 319 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 GJB4Q9NTQ9 266 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 TFCP2L1Q9NZI6 479 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 NEDD4P46934 1319 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 CYP19A1P11511 503 aaPredicted RBP13.1□□□□□ -0.31
TRAK1-202ENST00000341421 FBXL16Q8N461 479 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 KCNJ18B7U540 433 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 ATP1A3P13637 1013 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 INPP5BP32019 993 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 KCNJ12Q14500 433 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 FAM47AQ5JRC9 791 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 MCTP2Q6DN12 878 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 TAX1BP1Q86VP1 789 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 PNMA1Q8ND90 353 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 BRIP1Q9BX63 1249 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 GLT8D2Q9H1C3 349 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 FAN1Q9Y2M0 1017 aa13.1□□□□□ -0.31
TRAK1-202ENST00000341421 LOC102724159A0A0B4J2E5 919 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 CHGBP05060 677 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 MRPL12P52815 198 aaKnown RBP13.09□□□□□ -0.31
TRAK1-202ENST00000341421 PWP2Q15269 919 aaKnown RBP13.09□□□□□ -0.31
TRAK1-202ENST00000341421 MMS22LQ6ZRQ5 1243 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 BLZF1Q9H2G9 400 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
TRAK1-202ENST00000341421 PNPLA7Q6ZV29 1317 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 LAD1O00515 517 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 TNNI2P48788 182 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 E2F4Q16254 413 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 SUSD4Q5VX71 490 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 OTUD6BQ8N6M0 293 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 CNBD1Q8NA66 436 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 STAMQ92783 540 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 CUEDC2Q9H467 287 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 MAPK8IP1Q9UQF2 711 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 MYL1P05976 194 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 FDPSP14324 419 aaKnown RBP13.09□□□□□ -0.31
TRAK1-202ENST00000341421 DNM2P50570 870 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 RNF187Q5TA31 235 aaPredicted RBP13.09□□□□□ -0.31
TRAK1-202ENST00000341421 CABP7Q86V35 215 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 SPAG5Q96R06 1193 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 PLIN2Q99541 437 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 MYO1AQ9UBC5 1043 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 PCDHB6Q9Y5E3 794 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 UBN2Q6ZU65 1347 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 MEGF6O75095 1541 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 GOLGA6L7A0A1B0GV03 622 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 CDC27P30260 824 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 TNIP1Q15025 636 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 SRGAP1Q7Z6B7 1085 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 CCDC84Q86UT8 332 aaPredicted RBP13.09□□□□□ -0.31
TRAK1-202ENST00000341421 PANX2Q96RD6 677 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 DCCP43146 1447 aa13.09□□□□□ -0.31
TRAK1-202ENST00000341421 CCNT1O60563 726 aaKnown RBP13.08□□□□□ -0.31
TRAK1-202ENST00000341421 TOM1O60784 492 aa13.08□□□□□ -0.31
TRAK1-202ENST00000341421 SEPT11Q9NVA2 429 aaKnown RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms