RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 MORN1Q5T089 497 aa17.33■□□□□ 0.36
ERCC1-203ENST00000340192 NUP88Q99567 741 aaPredicted RBP17.33■□□□□ 0.36
ERCC1-203ENST00000340192 SPATC1LQ9H0A9 340 aa17.33■□□□□ 0.36
ERCC1-203ENST00000340192 RNF208Q9H0X6 261 aa17.33■□□□□ 0.36
ERCC1-203ENST00000340192 UNC93B1Q9H1C4 597 aa17.33■□□□□ 0.36
ERCC1-203ENST00000340192 ORC4O43929 436 aa17.32■□□□□ 0.36
ERCC1-203ENST00000340192 RANBP6O60518 1105 aaKnown RBP17.32■□□□□ 0.36
ERCC1-203ENST00000340192 HMGCRP04035 888 aa17.32■□□□□ 0.36
ERCC1-203ENST00000340192 FGRP09769 529 aa17.32■□□□□ 0.36
ERCC1-203ENST00000340192 HAND2P61296 217 aa17.32■□□□□ 0.36
ERCC1-203ENST00000340192 LRRC47Q8N1G4 583 aaKnown RBP17.32■□□□□ 0.36
ERCC1-203ENST00000340192 USP6NLQ92738 828 aa17.32■□□□□ 0.36
ERCC1-203ENST00000340192 MOV10L1Q9BXT6 1211 aaKnown RBP17.32■□□□□ 0.36
ERCC1-203ENST00000340192 SYNPO2Q9UMS6 1093 aa17.32■□□□□ 0.36
ERCC1-203ENST00000340192 NMT2O60551 498 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 XRCC5P13010 732 aaKnown RBP17.31■□□□□ 0.36
ERCC1-203ENST00000340192 RGS2P41220 211 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 PLS1Q14651 629 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 TRIB2Q92519 343 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 NBPF3Q9H094 633 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 IL17RBQ9NRM6 502 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 TOMM22Q9NS69 142 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 PPP1R9AQ9ULJ8 1098 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 ADAMTS5Q9UNA0 930 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 IVNS1ABPQ9Y6Y0 642 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 ZNF236Q9UL36 1845 aa17.31■□□□□ 0.36
ERCC1-203ENST00000340192 SLC15A5A6NIM6 579 aa17.3■□□□□ 0.36
ERCC1-203ENST00000340192 GJB1P08034 283 aa17.3■□□□□ 0.36
ERCC1-203ENST00000340192 PTPREP23469 700 aa17.3■□□□□ 0.36
ERCC1-203ENST00000340192 TRIM32Q13049 653 aa17.3■□□□□ 0.36
ERCC1-203ENST00000340192 TMEM132BQ14DG7 1078 aa17.3■□□□□ 0.36
ERCC1-203ENST00000340192 RRP12Q5JTH9 1297 aaKnown RBP17.3■□□□□ 0.36
ERCC1-203ENST00000340192 PPP4R3BQ5MIZ7 849 aa17.3■□□□□ 0.36
ERCC1-203ENST00000340192 GMCL1P1Q8NEA9 526 aa17.3■□□□□ 0.36
ERCC1-203ENST00000340192 APBA2Q99767 749 aa17.3■□□□□ 0.36
ERCC1-203ENST00000340192 STX8Q9UNK0 236 aa17.3■□□□□ 0.36
ERCC1-203ENST00000340192 VWA5AO00534 786 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 ERCC3P19447 782 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 GJA8P48165 433 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 MAP2K5Q13163 448 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 GRB14Q14449 540 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 CCL14Q16627 93 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 TRMT44Q8IYL2 757 aaKnown RBP17.29■□□□□ 0.36
ERCC1-203ENST00000340192 SHCBP1Q8NEM2 672 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 NKX2-3Q8TAU0 364 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 SHISA4Q96DD7 197 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 SLF1Q9BQI6 1058 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 IL25Q9H293 177 aa17.29■□□□□ 0.36
ERCC1-203ENST00000340192 ZNFX1Q9P2E3 1918 aaKnown RBP17.29■□□□□ 0.36
ERCC1-203ENST00000340192 ZKSCAN1P17029 563 aaPredicted RBP17.28■□□□□ 0.36
ERCC1-203ENST00000340192 AKNAD1Q5T1N1 836 aa17.28■□□□□ 0.36
ERCC1-203ENST00000340192 SLFN13Q68D06 897 aa17.28■□□□□ 0.36
ERCC1-203ENST00000340192 MFSD6Q6ZSS7 791 aa17.28■□□□□ 0.36
ERCC1-203ENST00000340192 NCAPG2Q86XI2 1143 aa17.28■□□□□ 0.36
ERCC1-203ENST00000340192 TBC1D10CQ8IV04 446 aa17.28■□□□□ 0.36
ERCC1-203ENST00000340192 U2AF1L4Q8WU68 220 aaKnown RBP17.28■□□□□ 0.36
ERCC1-203ENST00000340192 STAG1Q8WVM7 1258 aa17.28■□□□□ 0.36
ERCC1-203ENST00000340192 DSCC1Q9BVC3 393 aa17.28■□□□□ 0.36
ERCC1-203ENST00000340192 MROH8Q9H579 483 aa17.28■□□□□ 0.36
ERCC1-203ENST00000340192 PAK6Q9NQU5 681 aaPredicted RBP17.28■□□□□ 0.36
ERCC1-203ENST00000340192 ZNF213O14771 459 aa17.27■□□□□ 0.36
ERCC1-203ENST00000340192 STRNO43815 780 aa17.27■□□□□ 0.36
ERCC1-203ENST00000340192 PCP11498 1178 aaKnown RBP17.27■□□□□ 0.36
ERCC1-203ENST00000340192 BMP3P12645 472 aa17.27■□□□□ 0.36
ERCC1-203ENST00000340192 PRPF38AQ8NAV1 312 aaKnown RBP17.27■□□□□ 0.36
ERCC1-203ENST00000340192 REPS2Q8NFH8 660 aa17.27■□□□□ 0.36
ERCC1-203ENST00000340192 DEFB118Q96PH6 123 aa17.27■□□□□ 0.36
ERCC1-203ENST00000340192 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.27■□□□□ 0.36
ERCC1-203ENST00000340192 ZNF214Q9UL59 606 aaPredicted RBP17.27■□□□□ 0.36
ERCC1-203ENST00000340192 PDE4DIPQ5VU43 2346 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 NEDD4P46934 1319 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 RPTORQ8N122 1335 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 SGPL1O95470 568 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 SLC25A27O95847 323 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
ERCC1-203ENST00000340192 CHMLP26374 656 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 ADORA2AP29274 412 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 NOVP48745 357 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 MAP3K21Q5TCX8 1036 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 CENPQQ7L2Z9 268 aaPredicted RBP17.26■□□□□ 0.35
ERCC1-203ENST00000340192 RIOX2Q8IUF8 465 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 KIFC2Q96AC6 838 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 CHMP4CQ96CF2 233 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 GMCL1Q96IK5 515 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 RNF41Q9H4P4 317 aaPredicted RBP17.26■□□□□ 0.35
ERCC1-203ENST00000340192 HMX1Q9NP08 348 aaPredicted RBP17.26■□□□□ 0.35
ERCC1-203ENST00000340192 FLRT1Q9NZU1 646 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 FEM1BQ9UK73 627 aa17.26■□□□□ 0.35
ERCC1-203ENST00000340192 RAD50Q92878 1312 aa17.25■□□□□ 0.35
ERCC1-203ENST00000340192 PLXNA1Q9UIW2 1896 aa17.25■□□□□ 0.35
ERCC1-203ENST00000340192 HOXC6P09630 235 aa17.25■□□□□ 0.35
ERCC1-203ENST00000340192 MCCP23508 829 aa17.25■□□□□ 0.35
ERCC1-203ENST00000340192 STAT3P40763 770 aa17.25■□□□□ 0.35
ERCC1-203ENST00000340192 SLC1A4P43007 532 aa17.25■□□□□ 0.35
ERCC1-203ENST00000340192 CACNB2Q08289 660 aaPredicted RBP17.25■□□□□ 0.35
ERCC1-203ENST00000340192 DPP9Q86TI2 863 aa17.25■□□□□ 0.35
ERCC1-203ENST00000340192 NPLOC4Q8TAT6 608 aa17.25■□□□□ 0.35
ERCC1-203ENST00000340192 TCP11L1Q9NUJ3 509 aa17.25■□□□□ 0.35
ERCC1-203ENST00000340192 CTNNA3Q9UI47 895 aa17.25■□□□□ 0.35
ERCC1-203ENST00000340192 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms