RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 GPCPD1Q9NPB8 672 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 KCNH3Q9ULD8 1083 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 COL4A5P29400 1685 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 SHTN1A0MZ66 631 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 CLRN2A0PK11 232 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 RAD21O60216 631 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 PDHBP11177 359 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 MCM7P33993 719 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 SLC16A2P36021 539 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 IL17AQ16552 155 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 METTL16Q86W50 562 aaKnown RBP8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 CERS3Q8IU89 383 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 FAM43AQ8N2R8 423 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 PIGSQ96S52 555 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 PSMD14O00487 310 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 IGSF3O75054 1194 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 PARP1P09874 1014 aaKnown RBP8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 PTGDRQ13258 359 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 RRP1BQ14684 758 aaKnown RBP8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 CFAP100Q494V2 611 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 DHX40Q8IX18 779 aaKnown RBP8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 RGS22Q8NE09 1264 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 TTC12Q9H892 705 aaPredicted RBP8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 ZNF287Q9HBT7 754 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 TRIM75PA6NK02 468 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 STXBP3O00186 592 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 CUTAO60888 179 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 GDF11O95390 407 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 PRR29P0C7W0 189 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 TOP1P11387 765 aaKnown RBP8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 KCTD1Q719H9 257 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 STAMQ92783 540 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 COA7Q96BR5 231 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 NRBP1Q9UHY1 535 aa8.48□□□□□ -1.05
SRFBP1-201ENST00000339397 IGKV6D-41A0A0C4DH26 115 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 VWA3AA6NCI4 1184 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 TCP10L2B9ZVM9 353 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 BMP6P22004 513 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 NOVP48745 357 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 INF2Q27J81 1249 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 TTC38Q5R3I4 469 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 SIAH1Q8IUQ4 282 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 BLIDQ8IZY5 108 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 LARGE2Q8N3Y3 721 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 JMYQ8N9B5 988 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 SRPRBQ9Y5M8 271 aaKnown RBP8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 M0R2N6 131 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 CTAGE5O15320 804 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 PTMAP06454 111 aaKnown RBP8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 MDM2Q00987 491 aaPredicted RBP8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 C17orf53Q8N3J3 647 aaPredicted RBP8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 AOPEPQ8N6M6 819 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 BARHL2Q9NY43 387 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 PCDHA6Q9UN73 950 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 PCDHA8Q9Y5H6 950 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 PCDHA5Q9Y5H7 936 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 TAL1P17542 331 aaPredicted RBP8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 SNAP25P60880 206 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 SEPT2Q15019 361 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 STX1AQ16623 288 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 KRBA2Q6ZNG9 492 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 CNNM3Q8NE01 707 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 TMEM60Q9H2L4 133 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 PCDHA4Q9UN74 947 aa8.47□□□□□ -1.05
SRFBP1-201ENST00000339397 FAM237AA0A1B0GTK4 181 aa8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 PPP1R11O60927 126 aaPredicted RBP8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 TTLL1O95922 423 aa8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 EGFRP00533 1210 aa8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 EEF2P13639 858 aaKnown RBP8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 SYMPKQ92797 1274 aaKnown RBP8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 NUP88Q99567 741 aaPredicted RBP8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 TRIM5Q9C035 493 aa8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 TMEM260Q9NX78 707 aa8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 SERPINA10Q9UK55 444 aa8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.46□□□□□ -1.05
SRFBP1-201ENST00000339397 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 SMCO2A6NFE2 343 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 PP2D1A8MPX8 630 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 AFMP43652 599 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 NAPAP54920 295 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 PTPN21Q16825 1174 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 CERKLQ49MI3 558 aaPredicted RBP8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 CCDC93Q567U6 631 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 HSP90AA4PQ58FG1 418 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 ZSCAN30Q86W11 494 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 C4orf32Q8N8J7 132 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 DHX58Q96C10 678 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 UIMC1Q96RL1 719 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 IDI2Q9BXS1 227 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 BRMS1Q9HCU9 246 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 PI4KBQ9UBF8 816 aa8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 BIN2Q9UBW5 565 aaPredicted RBP8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 NOL7Q9UMY1 257 aaKnown RBP8.46□□□□□ -1.06
SRFBP1-201ENST00000339397 HLA-DOAP06340 250 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 GNAQP50148 359 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 R3HDM1Q15032 1099 aaKnown RBP8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 CCDC178Q5BJE1 867 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 JAKMIP3Q5VZ66 844 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms