RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ZNF444Q8N0Y2 327 aaPredicted RBP23.23■■□□□ 1.31
ITGA4-202ENST00000339307 TRPV1Q8NER1 839 aa23.23■■□□□ 1.31
ITGA4-202ENST00000339307 FSD1Q9BTV5 496 aa23.23■■□□□ 1.31
ITGA4-202ENST00000339307 TTC41PQ6P2S7 1318 aa23.22■■□□□ 1.31
ITGA4-202ENST00000339307 RLFQ13129 1914 aa23.22■■□□□ 1.31
ITGA4-202ENST00000339307 A0A1W2PPC1 479 aa23.22■■□□□ 1.31
ITGA4-202ENST00000339307 SLC25A27O95847 323 aa23.22■■□□□ 1.31
ITGA4-202ENST00000339307 COL6A1P12109 1028 aa23.22■■□□□ 1.31
ITGA4-202ENST00000339307 SLC4A3P48751 1232 aa23.22■■□□□ 1.31
ITGA4-202ENST00000339307 ATN1P54259 1190 aaPredicted RBP23.22■■□□□ 1.31
ITGA4-202ENST00000339307 OLFML2BQ68BL8 750 aa23.22■■□□□ 1.31
ITGA4-202ENST00000339307 MMP19Q99542 508 aa23.22■■□□□ 1.31
ITGA4-202ENST00000339307 NUP88Q99567 741 aaPredicted RBP23.22■■□□□ 1.31
ITGA4-202ENST00000339307 ZNF287Q9HBT7 754 aa23.22■■□□□ 1.31
ITGA4-202ENST00000339307 PRDM1O75626 825 aa23.21■■□□□ 1.31
ITGA4-202ENST00000339307 MAGEA10P43363 369 aaPredicted RBP23.21■■□□□ 1.31
ITGA4-202ENST00000339307 PRAMEF19Q5SWL8 479 aa23.21■■□□□ 1.31
ITGA4-202ENST00000339307 OTUD7AQ8TE49 926 aaPredicted RBP23.21■■□□□ 1.31
ITGA4-202ENST00000339307 GDF15Q99988 308 aa23.21■■□□□ 1.31
ITGA4-202ENST00000339307 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.21■■□□□ 1.31
ITGA4-202ENST00000339307 NACAP1Q9BZK3 213 aa23.21■■□□□ 1.31
ITGA4-202ENST00000339307 CLIP2Q9UDT6 1046 aa23.21■■□□□ 1.31
ITGA4-202ENST00000339307 PPP1R9AQ9ULJ8 1098 aa23.21■■□□□ 1.31
ITGA4-202ENST00000339307 CTDP1Q9Y5B0 961 aaPredicted RBP23.21■■□□□ 1.31
ITGA4-202ENST00000339307 PATL2C9JE40 543 aaKnown RBP23.2■■□□□ 1.3
ITGA4-202ENST00000339307 VWA5AO00534 786 aa23.2■■□□□ 1.3
ITGA4-202ENST00000339307 CYBAP13498 195 aa23.2■■□□□ 1.3
ITGA4-202ENST00000339307 STAT3P40763 770 aa23.2■■□□□ 1.3
ITGA4-202ENST00000339307 KCTD2Q14681 263 aa23.2■■□□□ 1.3
ITGA4-202ENST00000339307 GJC2Q5T442 439 aaPredicted RBP23.2■■□□□ 1.3
ITGA4-202ENST00000339307 EPB41L4AQ9HCS5 686 aaPredicted RBP23.2■■□□□ 1.3
ITGA4-202ENST00000339307 A0A0G2JMZ2 1700 aa23.2■■□□□ 1.3
ITGA4-202ENST00000339307 PGK2P07205 417 aa23.19■■□□□ 1.3
ITGA4-202ENST00000339307 RRP1P56182 461 aaKnown RBP23.19■■□□□ 1.3
ITGA4-202ENST00000339307 IFNL3Q8IZI9 196 aa23.19■■□□□ 1.3
ITGA4-202ENST00000339307 ABRAQ8N0Z2 381 aa23.19■■□□□ 1.3
ITGA4-202ENST00000339307 ARRDC4Q8NCT1 418 aa23.19■■□□□ 1.3
ITGA4-202ENST00000339307 SEC62Q99442 399 aaKnown RBP23.19■■□□□ 1.3
ITGA4-202ENST00000339307 UBE2OQ9C0C9 1292 aaKnown RBP23.19■■□□□ 1.3
ITGA4-202ENST00000339307 ISY1Q9ULR0 285 aaKnown RBP23.19■■□□□ 1.3
ITGA4-202ENST00000339307 F5H6K3 240 aa23.18■■□□□ 1.3
ITGA4-202ENST00000339307 KLRC3Q07444 240 aa23.18■■□□□ 1.3
ITGA4-202ENST00000339307 RIOX2Q8IUF8 465 aa23.18■■□□□ 1.3
ITGA4-202ENST00000339307 MAML3Q96JK9 1138 aa23.18■■□□□ 1.3
ITGA4-202ENST00000339307 SLF1Q9BQI6 1058 aa23.18■■□□□ 1.3
ITGA4-202ENST00000339307 NYAP2Q9P242 653 aa23.18■■□□□ 1.3
ITGA4-202ENST00000339307 KBTBD13C9JR72 458 aa23.17■■□□□ 1.3
ITGA4-202ENST00000339307 DNM1LO00429 736 aa23.17■■□□□ 1.3
ITGA4-202ENST00000339307 SOX1O00570 391 aaPredicted RBP23.17■■□□□ 1.3
ITGA4-202ENST00000339307 MX1P20591 662 aa23.17■■□□□ 1.3
ITGA4-202ENST00000339307 BMP8BP34820 402 aa23.17■■□□□ 1.3
ITGA4-202ENST00000339307 ANKRD45Q5TZF3 282 aa23.17■■□□□ 1.3
ITGA4-202ENST00000339307 PI4K2BQ8TCG2 481 aa23.17■■□□□ 1.3
ITGA4-202ENST00000339307 LRCH3Q96II8 777 aa23.17■■□□□ 1.3
ITGA4-202ENST00000339307 NAPBQ9H115 298 aa23.17■■□□□ 1.3
ITGA4-202ENST00000339307 ADAMTS5Q9UNA0 930 aa23.17■■□□□ 1.3
ITGA4-202ENST00000339307 FRMPD3Q5JV73 1810 aa23.17■■□□□ 1.3
ITGA4-202ENST00000339307 COL11A1P12107 1806 aaPredicted RBP23.17■■□□□ 1.3
ITGA4-202ENST00000339307 SEPT4O43236 478 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 NDUFB10O96000 172 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 SLC3A2P08195 630 aaKnown RBP23.16■■□□□ 1.3
ITGA4-202ENST00000339307 MDM2Q00987 491 aaPredicted RBP23.16■■□□□ 1.3
ITGA4-202ENST00000339307 ROBO3Q96MS0 1386 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 ZNF236Q9UL36 1845 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 TSPY3P0CV98 308 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 TSPY8P0CW00 308 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 PDE4BQ07343 736 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 CPXCR1Q8N123 301 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 KIFC2Q96AC6 838 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 CRBNQ96SW2 442 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 PRKAG2Q9UGJ0 569 aa23.16■■□□□ 1.3
ITGA4-202ENST00000339307 PARP14Q460N5 1801 aa23.15■■□□□ 1.3
ITGA4-202ENST00000339307 FAM47AQ5JRC9 791 aa23.15■■□□□ 1.3
ITGA4-202ENST00000339307 SNRNP48Q6IEG0 339 aaKnown RBP23.15■■□□□ 1.3
ITGA4-202ENST00000339307 LRRC47Q8N1G4 583 aaKnown RBP23.15■■□□□ 1.3
ITGA4-202ENST00000339307 CHMP4CQ96CF2 233 aa23.15■■□□□ 1.3
ITGA4-202ENST00000339307 CEP95Q96GE4 821 aa23.15■■□□□ 1.3
ITGA4-202ENST00000339307 ZNF214Q9UL59 606 aaPredicted RBP23.15■■□□□ 1.3
ITGA4-202ENST00000339307 ATP11BQ9Y2G3 1177 aa23.15■■□□□ 1.3
ITGA4-202ENST00000339307 ZBED4O75132 1171 aa23.14■■□□□ 1.29
ITGA4-202ENST00000339307 IGHA2P01877 340 aa23.14■■□□□ 1.29
ITGA4-202ENST00000339307 COPB2P35606 906 aa23.14■■□□□ 1.29
ITGA4-202ENST00000339307 TDHQ8IZJ6 230 aa23.14■■□□□ 1.29
ITGA4-202ENST00000339307 PRPF38AQ8NAV1 312 aaKnown RBP23.14■■□□□ 1.29
ITGA4-202ENST00000339307 DDX11Q96FC9 970 aa23.14■■□□□ 1.29
ITGA4-202ENST00000339307 YTHDC1Q96MU7 727 aaKnown RBP23.14■■□□□ 1.29
ITGA4-202ENST00000339307 LBHD1Q9BQE6 289 aaPredicted RBP23.14■■□□□ 1.29
ITGA4-202ENST00000339307 RANBP2P49792 3224 aaKnown RBP23.14■■□□□ 1.29
ITGA4-202ENST00000339307 ZNFX1Q9P2E3 1918 aaKnown RBP23.13■■□□□ 1.29
ITGA4-202ENST00000339307 TTLL1O95922 423 aa23.13■■□□□ 1.29
ITGA4-202ENST00000339307 PPARAQ07869 468 aa23.13■■□□□ 1.29
ITGA4-202ENST00000339307 ZMYM1Q5SVZ6 1142 aa23.13■■□□□ 1.29
ITGA4-202ENST00000339307 FERMT2Q96AC1 680 aa23.13■■□□□ 1.29
ITGA4-202ENST00000339307 TEX13BQ9BXU2 312 aa23.13■■□□□ 1.29
ITGA4-202ENST00000339307 MTMR4Q9NYA4 1195 aa23.13■■□□□ 1.29
ITGA4-202ENST00000339307 RTP1P59025 263 aa23.12■■□□□ 1.29
ITGA4-202ENST00000339307 TFAP4Q01664 338 aa23.12■■□□□ 1.29
ITGA4-202ENST00000339307 CCDC129Q6ZRS4 1044 aa23.12■■□□□ 1.29
ITGA4-202ENST00000339307 REPS2Q8NFH8 660 aa23.12■■□□□ 1.29
ITGA4-202ENST00000339307 TINF2Q9BSI4 451 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms