RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 CLIP2Q9UDT6 1046 aa19.67■□□□□ 0.74
ATAD3A-201ENST00000339113 ZNF202O95125 648 aa19.66■□□□□ 0.74
ATAD3A-201ENST00000339113 PARP1P09874 1014 aaKnown RBP19.66■□□□□ 0.74
ATAD3A-201ENST00000339113 EHD4Q9H223 541 aa19.66■□□□□ 0.74
ATAD3A-201ENST00000339113 A0A087WWV3 80 aa19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 VIL1P09327 827 aaKnown RBP19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 ANO6Q4KMQ2 910 aa19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 SPECC1Q5M775 1068 aa19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 ZSCAN29Q8IWY8 852 aaPredicted RBP19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 PRIMPOLQ96LW4 560 aa19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 GMLQ99445 158 aa19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 TGFB2P61812 414 aa19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 WWC2Q6AWC2 1192 aa19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 DHX36Q9H2U1 1008 aaKnown RBP19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 FBXO2Q9UK22 296 aaPredicted RBP19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 HPSEQ9Y251 543 aa19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 MYO3BQ8WXR4 1341 aa19.65■□□□□ 0.74
ATAD3A-201ENST00000339113 MPHOSPH10O00566 681 aaKnown RBP19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 CTAGE5O15320 804 aa19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 CUTAO60888 179 aa19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 PDHBP11177 359 aa19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 RESP18Q5W5W9 173 aa19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 KRI1Q8N9T8 703 aaKnown RBP19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 SDF4Q9BRK5 362 aa19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 UBA5Q9GZZ9 404 aa19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 MTFR1LQ9H019 292 aa19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 BRMS1Q9HCU9 246 aa19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 PI4KBQ9UBF8 816 aa19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 PPP1R1BQ9UD71 204 aaPredicted RBP19.64■□□□□ 0.74
ATAD3A-201ENST00000339113 KIF13BQ9NQT8 1826 aa19.64■□□□□ 0.73
ATAD3A-201ENST00000339113 R3HDM1Q15032 1099 aaKnown RBP19.64■□□□□ 0.73
ATAD3A-201ENST00000339113 MYRIPQ8NFW9 859 aa19.64■□□□□ 0.73
ATAD3A-201ENST00000339113 LZTS2Q9BRK4 669 aa19.64■□□□□ 0.73
ATAD3A-201ENST00000339113 SPZ1Q9BXG8 430 aa19.64■□□□□ 0.73
ATAD3A-201ENST00000339113 VAT1LQ9HCJ6 419 aa19.64■□□□□ 0.73
ATAD3A-201ENST00000339113 FRMPD2Q68DX3 1309 aaPredicted RBP19.64■□□□□ 0.73
ATAD3A-201ENST00000339113 NPM3O75607 178 aaKnown RBP19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 TTLL1O95922 423 aa19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 PTPREP23469 700 aa19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 SIPA1L1O43166 1804 aa19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 TRIM75PA6NK02 468 aa19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 PIK3AP1Q6ZUJ8 805 aa19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 HEATR3Q7Z4Q2 680 aa19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 RASGRP4Q8TDF6 673 aa19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 DNAJC25Q9H1X3 360 aa19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 SH3GLB2Q9NR46 395 aa19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 USP25Q9UHP3 1055 aa19.63■□□□□ 0.73
ATAD3A-201ENST00000339113 FAM237AA0A1B0GTK4 181 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 STXBP3O00186 592 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 POLD1P28340 1107 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 GTF2F1P35269 517 aaKnown RBP eCLIP19.62■□□□□ 0.739e-7■■■■■ 27.6
ATAD3A-201ENST00000339113 HOMER1Q86YM7 354 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 BLIDQ8IZY5 108 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 FAM200AQ8TCP9 573 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 SPDYE2BA6NHP3 402 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 AP5Z1O43299 807 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 SPDYE6P0CI01 402 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 SNHG28P0DPA3 235 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 SYKP43405 635 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 ZNF174Q15697 407 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 DALRD3Q5D0E6 543 aaKnown RBP19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 LUZP1Q86V48 1076 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 CBX8Q9HC52 389 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 BARHL2Q9NY43 387 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 ZNRF3Q9ULT6 936 aa19.62■□□□□ 0.73
ATAD3A-201ENST00000339113 CLRN2A0PK11 232 aa19.61■□□□□ 0.73
ATAD3A-201ENST00000339113 ATP2B2Q01814 1243 aa19.61■□□□□ 0.73
ATAD3A-201ENST00000339113 CCDC17Q96LX7 622 aa19.61■□□□□ 0.73
ATAD3A-201ENST00000339113 PIGSQ96S52 555 aa19.61■□□□□ 0.73
ATAD3A-201ENST00000339113 PCDHA4Q9UN74 947 aa19.61■□□□□ 0.73
ATAD3A-201ENST00000339113 M0R2N6 131 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 CERKLQ49MI3 558 aaPredicted RBP19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 SPTLC3Q9NUV7 552 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 SRPRBQ9Y5M8 271 aaKnown RBP19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 TCP10L2B9ZVM9 353 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 ENTPD3O75355 529 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 CALML3P27482 149 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 CXCL9Q07325 125 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 NOLC1Q14978 699 aaKnown RBP eCLIP19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 TATDN1Q6P1N9 297 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 C11orf57Q6ZUT1 292 aaPredicted RBP19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 FOXP4Q8IVH2 680 aaPredicted RBP19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 NIM1KQ8IY84 436 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 RIOX1Q9H6W3 641 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 GPCPD1Q9NPB8 672 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 CEP131Q9UPN4 1083 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 MYH8P13535 1937 aa19.6■□□□□ 0.73
ATAD3A-201ENST00000339113 JAG1P78504 1218 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 TTC38Q5R3I4 469 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 SOGA3Q5TF21 947 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 USP49Q70CQ1 688 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 VPS33BQ9H267 617 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 KIAA1468Q9P260 1216 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 KCNH3Q9ULD8 1083 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 PSME4Q14997 1843 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 ADCY5O95622 1261 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 SMARCA1P28370 1054 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 RRP1BQ14684 758 aaKnown RBP19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 LONRF3Q496Y0 759 aa19.59■□□□□ 0.73
ATAD3A-201ENST00000339113 METTL16Q86W50 562 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms