RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 KRT71Q3SY84 523 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 CCDC93Q567U6 631 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 ANO1Q5XXA6 986 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
SHANK2-201ENST00000338508 ATP6V1E2Q96A05 226 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 TNNQ9UQP3 1299 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 SCNN1DP51172 638 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 DOK7Q18PE1 504 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 CABS1Q96KC9 395 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 PLCB1Q9NQ66 1216 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 PTPN22Q9Y2R2 807 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 MAGI1Q96QZ7 1491 aaPredicted RBP12.96□□□□□ -0.34
SHANK2-201ENST00000338508 PLCH2O75038 1416 aa12.96□□□□□ -0.34
SHANK2-201ENST00000338508 NVLO15381 856 aaKnown RBP12.96□□□□□ -0.34
SHANK2-201ENST00000338508 C2CD5Q86YS7 1000 aa12.96□□□□□ -0.34
SHANK2-201ENST00000338508 RPS6KC1Q96S38 1066 aa12.96□□□□□ -0.34
SHANK2-201ENST00000338508 ZNF277Q9NRM2 450 aaPredicted RBP12.96□□□□□ -0.34
SHANK2-201ENST00000338508 ALDH1L1O75891 902 aa12.96□□□□□ -0.34
SHANK2-201ENST00000338508 S100BP04271 92 aaPredicted RBP12.96□□□□□ -0.34
SHANK2-201ENST00000338508 ANKRD44Q8N8A2 993 aa12.96□□□□□ -0.34
SHANK2-201ENST00000338508 KIF14Q15058 1648 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 PPIP5K1Q6PFW1 1433 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 GPAA1O43292 621 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 GTF2IP78347 998 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 FANCCQ00597 558 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 CCDC38Q502W7 563 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 LMCD1Q9NZU5 365 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 ACBD5Q5T8D3 534 aaPredicted RBP12.95□□□□□ -0.34
SHANK2-201ENST00000338508 USP40Q9NVE5 1235 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 TNNC2P02585 160 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 TECP42680 631 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 MOSPD1Q9UJG1 213 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 EIF4A2Q14240 407 aaKnown RBP12.95□□□□□ -0.34
SHANK2-201ENST00000338508 XKR9Q5GH70 373 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 RASSF4Q9H2L5 321 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 VCX3AQ9NNX9 186 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 INPP5FQ9Y2H2 1132 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 ZKSCAN5Q9Y2L8 839 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 NCKAP5LQ9HCH0 1330 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 LRRIQ4A6NIV6 560 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 ZBTB41Q5SVQ8 909 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.34
SHANK2-201ENST00000338508 FGD4Q96M96 766 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 SLC5A4Q9NY91 659 aa12.95□□□□□ -0.34
SHANK2-201ENST00000338508 TPX2Q9ULW0 747 aaKnown RBP12.95□□□□□ -0.34
SHANK2-201ENST00000338508 RPS6KB1P23443 525 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 GNGT2O14610 69 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 KCNK3O14649 394 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 RGS16O15492 202 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-201ENST00000338508 FLOT1O75955 427 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 KIF11P52732 1056 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 SDCCAG3Q96C92 435 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 DDX41Q9UJV9 622 aaKnown RBP12.94□□□□□ -0.34
SHANK2-201ENST00000338508 A0A1B0GUA9 196 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 K7ENM7 598 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 RNASELQ05823 741 aaKnown RBP12.94□□□□□ -0.34
SHANK2-201ENST00000338508 SZRD1Q7Z422 152 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 CCDC127Q96BQ5 260 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 GBP5Q96PP8 586 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 MTRQ99707 1265 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 ANLNQ9NQW6 1124 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 PIK3CAP42336 1068 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 IQCB1Q15051 598 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 SYCE1Q8N0S2 351 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 TROVE2P10155 538 aaKnown RBP eCLIP12.94□□□□□ -0.343e-6■■□□□ 11.8
SHANK2-201ENST00000338508 ELF2Q15723 593 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 DPH5Q9H2P9 285 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 PRKAG2Q9UGJ0 569 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 AMFRQ9UKV5 643 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 AKT3Q9Y243 479 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
SHANK2-201ENST00000338508 TMOD1P28289 359 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 GPBP1Q86WP2 473 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 LRRC47Q8N1G4 583 aaKnown RBP12.94□□□□□ -0.34
SHANK2-201ENST00000338508 LRGUKQ96M69 825 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 ADPGKQ9BRR6 497 aa12.94□□□□□ -0.34
SHANK2-201ENST00000338508 TTF2Q9UNY4 1162 aaKnown RBP12.94□□□□□ -0.34
SHANK2-201ENST00000338508 H7C0C1 242 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 ATP5OP48047 213 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 ADKP55263 362 aaKnown RBP12.93□□□□□ -0.34
SHANK2-201ENST00000338508 NONOQ15233 471 aaKnown RBP eCLIP12.93□□□□□ -0.34
SHANK2-201ENST00000338508 CFAP221Q4G0U5 840 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 HNRNPCL2B2RXH8 293 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 HNRNPCL1O60812 293 aaKnown RBP12.93□□□□□ -0.34
SHANK2-201ENST00000338508 NAA35Q5VZE5 725 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 TTC19Q6DKK2 380 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-201ENST00000338508 SLC27A2O14975 620 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 ATP1A2P50993 1020 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 POLGP54098 1239 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-201ENST00000338508 TUBB4BP68371 445 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 NOP14P78316 857 aaKnown RBP12.93□□□□□ -0.34
SHANK2-201ENST00000338508 ADCY1Q08828 1119 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 LLGL1Q15334 1064 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 RUFY4Q6ZNE9 571 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 FAM227BQ96M60 508 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 ZNF202O95125 648 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 ARHGAP4P98171 946 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 TFAP4Q01664 338 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 PNOCQ13519 176 aa12.93□□□□□ -0.34
SHANK2-201ENST00000338508 TRIM14Q14142 442 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms