RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 FOXN1O15353 648 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 PPP6R2O75170 966 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 LINGO3P0C6S8 592 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 MARCKSP29966 332 aaPredicted RBP7.58□□□□□ -1.2
CAST-203ENST00000338252 SARSP49591 514 aaKnown RBP7.58□□□□□ -1.2
CAST-203ENST00000338252 APBA1Q02410 837 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 MYO1EQ12965 1108 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 MKRN4PQ13434 485 aaPredicted RBP7.58□□□□□ -1.2
CAST-203ENST00000338252 BYSLQ13895 437 aaKnown RBP7.58□□□□□ -1.2
CAST-203ENST00000338252 SLC9C2Q5TAH2 1124 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 KCTD16Q68DU8 428 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 EMBQ6PCB8 327 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 AACSQ86V21 672 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 MFN1Q8IWA4 741 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 TRMT44Q8IYL2 757 aaKnown RBP7.58□□□□□ -1.2
CAST-203ENST00000338252 MMGT1Q8N4V1 131 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 MLKLQ8NB16 471 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 C1orf131Q8NDD1 294 aaKnown RBP7.58□□□□□ -1.2
CAST-203ENST00000338252 ZNF274Q96GC6 653 aaPredicted RBP7.58□□□□□ -1.2
CAST-203ENST00000338252 TMX4Q9H1E5 349 aaPredicted RBP7.58□□□□□ -1.2
CAST-203ENST00000338252 SENP2Q9HC62 589 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 LMCD1Q9NZU5 365 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 TRIM10Q9UDY6 481 aa7.58□□□□□ -1.2
CAST-203ENST00000338252 A6NHS1 94 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 ZNF233A6NK53 670 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 HSF2BPO75031 334 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 KRT14P02533 472 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 PYGLP06737 847 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 CSB-PGBD3P0DP91 1061 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 NR1D1P20393 614 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 EPHB4P54760 987 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 MTA1Q13330 715 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 MORC3Q14149 939 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 SLMAPQ14BN4 828 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 ZNF572Q7Z3I7 529 aaPredicted RBP7.57□□□□□ -1.2
CAST-203ENST00000338252 RPUSD2Q8IZ73 545 aaKnown RBP7.57□□□□□ -1.2
CAST-203ENST00000338252 IQCKQ8N0W5 287 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 HDAC7Q8WUI4 952 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 CAPZA3Q96KX2 299 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 CAMKK2Q96RR4 588 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 POLD4Q9HCU8 107 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 ABHD10Q9NUJ1 306 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.57□□□□□ -1.2
CAST-203ENST00000338252 U3KPZ7 1027 aaPredicted RBP7.57□□□□□ -1.2
CAST-203ENST00000338252 MARF1Q9Y4F3 1742 aaKnown RBP7.57□□□□□ -1.2
CAST-203ENST00000338252 KDRP35968 1356 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 UTRNP46939 3433 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 RGL2O15211 777 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 KCNQ2O43526 872 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 BUB1BO60566 1050 aaPredicted RBP7.57□□□□□ -1.2
CAST-203ENST00000338252 ANP32DO95626 131 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 TNFRSF8P28908 595 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 PDE6BP35913 854 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 RIPK1Q13546 671 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 PTPAQ15257 358 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 CCDC102BQ68D86 513 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 SLC30A9Q6PML9 568 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 CYP26C1Q6V0L0 522 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 TRIM58Q8NG06 486 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 JAKMIP2Q96AA8 810 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 TBC1D31Q96DN5 1066 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 L3MBTL3Q96JM7 780 aaPredicted RBP7.57□□□□□ -1.2
CAST-203ENST00000338252 OSBPL9Q96SU4 736 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 DMGDHQ9UI17 866 aaKnown RBP7.57□□□□□ -1.2
CAST-203ENST00000338252 NALCNQ8IZF0 1738 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 MAP3K15Q6ZN16 1313 aa7.57□□□□□ -1.2
CAST-203ENST00000338252 C5orf60A6NFR6 353 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 SPDYE3A6NKU9 549 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 RNF225M0QZC1 329 aaPredicted RBP7.56□□□□□ -1.2
CAST-203ENST00000338252 PPFIA2O75334 1257 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 KIF23Q02241 960 aaPredicted RBP7.56□□□□□ -1.2
CAST-203ENST00000338252 ITIH3Q06033 890 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 C2orf54Q08AI8 447 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 ITGB3BPQ13352 177 aaPredicted RBP7.56□□□□□ -1.2
CAST-203ENST00000338252 BLMHQ13867 455 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 BEND3Q5T5X7 828 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 CCDC181Q5TID7 509 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 PPP4R3AQ6IN85 833 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 SYNE3Q6ZMZ3 975 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 ANKRD23Q86SG2 305 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 CD302Q8IX05 232 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 CCT6BQ92526 530 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 P3H4Q92791 437 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 EAF2Q96CJ1 260 aaPredicted RBP7.56□□□□□ -1.2
CAST-203ENST00000338252 RUFY1Q96T51 708 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 SLF1Q9BQI6 1058 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 TLR7Q9NYK1 1049 aaKnown RBP7.56□□□□□ -1.2
CAST-203ENST00000338252 GUCA1BQ9UMX6 200 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 E7EVH7 732 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 ZNF185O15231 689 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 PPIP5K2O43314 1243 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 GHRP10912 638 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 ERCC5P28715 1186 aaPredicted RBP7.56□□□□□ -1.2
CAST-203ENST00000338252 PAPOLAP51003 745 aaKnown RBP7.56□□□□□ -1.2
CAST-203ENST00000338252 GLE1Q53GS7 698 aaKnown RBP7.56□□□□□ -1.2
CAST-203ENST00000338252 CDKAL1Q5VV42 579 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 ZNF662Q6ZS27 426 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 PIK3R5Q8WYR1 880 aa7.56□□□□□ -1.2
CAST-203ENST00000338252 EZH1Q92800 747 aaPredicted RBP7.56□□□□□ -1.2
CAST-203ENST00000338252 C8orf76Q96K31 380 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms