RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 MAGEA9P43362 315 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 SLC10A5Q5PT55 438 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 FAM196AQ6ZSG2 479 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 RASGRP4Q8TDF6 673 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 RNF26Q9BY78 433 aaPredicted RBP15.73■□□□□ 0.11
SF1-202ENST00000334944 CPVLQ9H3G5 476 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 USP21Q9UK80 565 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 CNTNAP4Q9C0A0 1308 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 VWA3AA6NCI4 1184 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 TRIM75PA6NK02 468 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 TOM1O60784 492 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 KRT2P35908 639 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 STX17P56962 302 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 MDM2Q00987 491 aaPredicted RBP15.73■□□□□ 0.11
SF1-202ENST00000334944 PIK3AP1Q6ZUJ8 805 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 EXOC4Q96A65 974 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 BPIFA3Q9BQP9 254 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 PARP3Q9Y6F1 533 aa15.73■□□□□ 0.11
SF1-202ENST00000334944 USP17L3A6NCW0 530 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 USP17L4A6NCW7 530 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 LONRF2Q1L5Z9 754 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 TRIM65Q6PJ69 517 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 USP17L1Q7RTZ2 530 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 SH3RF3Q8TEJ3 882 aaPredicted RBP15.72■□□□□ 0.11
SF1-202ENST00000334944 WDR24Q96S15 920 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 NYXQ9GZU5 481 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 FAN1Q9Y2M0 1017 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 USP5P45974 858 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 GSDMDP57764 484 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 TIAM2Q8IVF5 1701 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 CTCFLQ8NI51 663 aaPredicted RBP15.72■□□□□ 0.11
SF1-202ENST00000334944 PHF20Q9BVI0 1012 aa15.72■□□□□ 0.11
SF1-202ENST00000334944 TFAP4Q01664 338 aa15.71■□□□□ 0.11
SF1-202ENST00000334944 TMTC3Q6ZXV5 915 aa15.71■□□□□ 0.11
SF1-202ENST00000334944 STAG2Q8N3U4 1231 aa15.71■□□□□ 0.11
SF1-202ENST00000334944 SYMPKQ92797 1274 aaKnown RBP15.71■□□□□ 0.11
SF1-202ENST00000334944 MCM7P33993 719 aa15.71■□□□□ 0.11
SF1-202ENST00000334944 VPS72Q15906 364 aa15.71■□□□□ 0.11
SF1-202ENST00000334944 TGFBRAP1Q8WUH2 860 aa15.71■□□□□ 0.11
SF1-202ENST00000334944 SAMSN1Q9NSI8 373 aaKnown RBP15.71■□□□□ 0.11
SF1-202ENST00000334944 NFE2L3Q9Y4A8 694 aa15.71■□□□□ 0.11
SF1-202ENST00000334944 EFCAB8A8MWE9 144 aa15.71■□□□□ 0.1
SF1-202ENST00000334944 XBP1P17861 261 aa15.71■□□□□ 0.1
SF1-202ENST00000334944 NLRP5P59047 1200 aa15.71■□□□□ 0.1
SF1-202ENST00000334944 MAPKAPK5Q8IW41 473 aa15.71■□□□□ 0.1
SF1-202ENST00000334944 MED15Q96RN5 788 aa15.71■□□□□ 0.1
SF1-202ENST00000334944 RABEP2Q9H5N1 569 aa15.71■□□□□ 0.1
SF1-202ENST00000334944 SRPRBQ9Y5M8 271 aaKnown RBP15.71■□□□□ 0.1
SF1-202ENST00000334944 FAM237AA0A1B0GTK4 181 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 GOLGA8HP0CJ92 632 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 GNG11P61952 73 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 NPY5RQ15761 445 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 OSBPL5Q9H0X9 879 aaPredicted RBP15.7■□□□□ 0.1
SF1-202ENST00000334944 INTS13Q9NVM9 706 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.7■□□□□ 0.1
SF1-202ENST00000334944 PRPF3O43395 683 aaKnown RBP15.7■□□□□ 0.1
SF1-202ENST00000334944 ACTN4O43707 911 aaKnown RBP15.7■□□□□ 0.1
SF1-202ENST00000334944 TFRCP02786 760 aaKnown RBP15.7■□□□□ 0.1
SF1-202ENST00000334944 PTGDRQ13258 359 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 MICALL1Q8N3F8 863 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 ANKRD2Q9GZV1 360 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 BLZF1Q9H2G9 400 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 BRMS1Q9HCU9 246 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 MYH6P13533 1939 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 CNTNAP5Q8WYK1 1306 aa15.7■□□□□ 0.1
SF1-202ENST00000334944 IKBKBO14920 756 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 PPP2R3AQ06190 1150 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 RCSD1Q6JBY9 416 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 STX8Q9UNK0 236 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 DUOX1Q9NRD9 1551 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 NID2Q14112 1375 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 PSDA5PKW4 1024 aaPredicted RBP15.69■□□□□ 0.1
SF1-202ENST00000334944 LDHBP07195 334 aaKnown RBP15.69■□□□□ 0.1
SF1-202ENST00000334944 BRD2P25440 801 aaKnown RBP15.69■□□□□ 0.1
SF1-202ENST00000334944 TRAPPC3LQ5T215 181 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 CXorf56Q9H5V9 222 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 IL17RBQ9NRM6 502 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 LRRC4BQ9NT99 713 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 PUF60Q9UHX1 559 aaKnown RBP15.69■□□□□ 0.1
SF1-202ENST00000334944 COL5A3P25940 1745 aaPredicted RBP15.69■□□□□ 0.1
SF1-202ENST00000334944 CLGNO14967 610 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 PLCD1P51178 756 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 CNBD1Q8NA66 436 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 MKNK2Q9HBH9 465 aa15.69■□□□□ 0.1
SF1-202ENST00000334944 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
SF1-202ENST00000334944 TTC38Q5R3I4 469 aa15.68■□□□□ 0.1
SF1-202ENST00000334944 IRX2Q9BZI1 471 aaPredicted RBP15.68■□□□□ 0.1
SF1-202ENST00000334944 RREB1Q92766 1687 aa15.68■□□□□ 0.1
SF1-202ENST00000334944 ADKP55263 362 aaKnown RBP15.68■□□□□ 0.1
SF1-202ENST00000334944 CCDC102AQ96A19 550 aa15.68■□□□□ 0.1
SF1-202ENST00000334944 PLIN2Q99541 437 aa15.68■□□□□ 0.1
SF1-202ENST00000334944 CEP131Q9UPN4 1083 aa15.68■□□□□ 0.1
SF1-202ENST00000334944 TOP1P11387 765 aaKnown RBP15.67■□□□□ 0.1
SF1-202ENST00000334944 KARSQ15046 597 aaKnown RBP15.67■□□□□ 0.1
SF1-202ENST00000334944 MAPK8IP1Q9UQF2 711 aa15.67■□□□□ 0.1
SF1-202ENST00000334944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
SF1-202ENST00000334944 CCDC172P0C7W6 258 aa15.67■□□□□ 0.1
SF1-202ENST00000334944 SCG2P13521 617 aa15.67■□□□□ 0.1
SF1-202ENST00000334944 CD44P16070 742 aaKnown RBP15.67■□□□□ 0.1
SF1-202ENST00000334944 IBSPP21815 317 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms