RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 CDHR1Q96JP9 859 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 CLSTN2Q9H4D0 955 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 ZNRF3Q9ULT6 936 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 LAD1O00515 517 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 GRIN3BO60391 1043 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 NECTIN1Q15223 517 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 ALX1Q15699 326 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 SEPT7Q16181 437 aaKnown RBP12.56□□□□□ -0.4
POLR1B-202ENST00000333990 INF2Q27J81 1249 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 MRVI1Q9Y6F6 885 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 H0YCG3 227 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 SNAP23O00161 211 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 SH2B2O14492 632 aaPredicted RBP12.55□□□□□ -0.4
POLR1B-202ENST00000333990 PRR16Q569H4 304 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 HSP90AA4PQ58FG1 418 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 PLA2G4DQ86XP0 818 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 HACE1Q8IYU2 909 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 SPICE1Q8N0Z3 855 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 TEKT3Q9BXF9 490 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 ZNF341Q9BYN7 854 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 FOXP1Q9H334 677 aaPredicted RBP12.55□□□□□ -0.4
POLR1B-202ENST00000333990 ZNF277Q9NRM2 450 aaPredicted RBP12.55□□□□□ -0.4
POLR1B-202ENST00000333990 BTBD18B2RXH4 712 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 KRT83P78385 493 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 CEP135Q66GS9 1140 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 CMTR1Q8N1G2 835 aaKnown RBP12.55□□□□□ -0.4
POLR1B-202ENST00000333990 TBC1D16Q8TBP0 767 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 STAG1Q8WVM7 1258 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 TDRD3Q9H7E2 651 aaKnown RBP12.55□□□□□ -0.4
POLR1B-202ENST00000333990 MACROD2A1Z1Q3 448 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
POLR1B-202ENST00000333990 FMNL1O95466 1100 aaPredicted RBP12.55□□□□□ -0.4
POLR1B-202ENST00000333990 UBXN1Q04323 297 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 SCRN1Q12765 414 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 WDR44Q5JSH3 913 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 AXDND1Q5T1B0 1012 aaPredicted RBP12.55□□□□□ -0.4
POLR1B-202ENST00000333990 STRIP1Q5VSL9 837 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 C2orf69Q8N8R5 385 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 RGL2O15211 777 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 BIRC3Q13489 604 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 DPP9Q86TI2 863 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 CCDC42Q96M95 316 aa12.55□□□□□ -0.4
POLR1B-202ENST00000333990 LUC7L2Q9Y383 392 aaKnown RBP12.55□□□□□ -0.4
POLR1B-202ENST00000333990 MEGF6O75095 1541 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 MAP9Q49MG5 647 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 GPKOWQ92917 476 aaPredicted RBP eCLIP12.54□□□□□ -0.4
POLR1B-202ENST00000333990 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
POLR1B-202ENST00000333990 CHRNA5P30532 468 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 ACTN2P35609 894 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 TPH2Q8IWU9 490 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 DHX37Q8IY37 1157 aaKnown RBP12.54□□□□□ -0.4
POLR1B-202ENST00000333990 FNBP4Q8N3X1 1017 aaPredicted RBP12.54□□□□□ -0.4
POLR1B-202ENST00000333990 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
POLR1B-202ENST00000333990 MTMR6Q9Y217 621 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 COL5A2P05997 1499 aaPredicted RBP12.54□□□□□ -0.4
POLR1B-202ENST00000333990 POSTNQ15063 836 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 TBC1D10BQ4KMP7 808 aaPredicted RBP12.54□□□□□ -0.4
POLR1B-202ENST00000333990 SYDE2Q5VT97 1194 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 CNGA4Q8IV77 575 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 MYCT1Q8N699 235 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 CSGALNACT2Q8N6G5 542 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 LMBR1Q8WVP7 490 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 DYNLL2Q96FJ2 89 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 LARSQ9P2J5 1176 aaKnown RBP12.54□□□□□ -0.4
POLR1B-202ENST00000333990 DDX25Q9UHL0 483 aaKnown RBP12.54□□□□□ -0.4
POLR1B-202ENST00000333990 HERC5Q9UII4 1024 aaKnown RBP12.54□□□□□ -0.4
POLR1B-202ENST00000333990 GINS2Q9Y248 185 aa12.54□□□□□ -0.4
POLR1B-202ENST00000333990 TUBB4AP04350 444 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 PAK1Q13153 545 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 DCAF17Q5H9S7 520 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 WDR19Q8NEZ3 1342 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 VWA3BQ502W6 1294 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 CTNNBL1Q8WYA6 563 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 DCP1AQ9NPI6 582 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 PCDHA4Q9UN74 947 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 KIF1AQ12756 1690 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 POLR1AO95602 1720 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 UTYO14607 1347 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 TNNT1P13805 278 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 LONP1P36776 959 aaKnown RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 RCAN1P53805 252 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 TBC1D8BQ0IIM8 1120 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 MIGA2Q7L4E1 593 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 ZNF512BQ96KM6 892 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 WDR11Q9BZH6 1224 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 TRMT1Q9NXH9 659 aaKnown RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 TNS2Q63HR2 1409 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 PRPF3O43395 683 aaKnown RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 HARSP12081 509 aaKnown RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 SNW1Q13573 536 aaKnown RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 TRIM14Q14142 442 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 DCAF4Q8WV16 495 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 JPH2Q9BR39 696 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
POLR1B-202ENST00000333990 NRBP2Q9NSY0 501 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
POLR1B-202ENST00000333990 GH2P01242 217 aa12.52□□□□□ -0.4
POLR1B-202ENST00000333990 PDIA6Q15084 440 aa12.52□□□□□ -0.4
POLR1B-202ENST00000333990 FAM160B1Q5W0V3 765 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms