RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 KIF28PB7ZC32 967 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 ASNSP08243 561 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 KCTD1Q719H9 257 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 GMCL1P1Q8NEA9 526 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 LZTS2Q9BRK4 669 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 SPZ1Q9BXG8 430 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 GPCPD1Q9NPB8 672 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 KCNJ14Q9UNX9 436 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 TCHHQ07283 1943 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 TRAK2O60296 914 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 KIAA1755Q5JYT7 1200 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 SLFN13Q68D06 897 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 VPS54Q9P1Q0 977 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 TMX2Q9Y320 296 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 WDR90Q96KV7 1748 aa26.9■■□□□ 1.9
TSEN54-201ENST00000333213 CTNND1O60716 968 aaKnown RBP26.89■■□□□ 1.9
TSEN54-201ENST00000333213 NDUFB10O96000 172 aa26.89■■□□□ 1.9
TSEN54-201ENST00000333213 PFKFB3Q16875 520 aaPredicted RBP26.89■■□□□ 1.9
TSEN54-201ENST00000333213 DCAF15Q66K64 600 aa26.89■■□□□ 1.9
TSEN54-201ENST00000333213 ZNF341Q9BYN7 854 aa26.89■■□□□ 1.9
TSEN54-201ENST00000333213 ZSCAN16Q9H4T2 348 aaPredicted RBP26.89■■□□□ 1.9
TSEN54-201ENST00000333213 RAD21O60216 631 aa26.88■■□□□ 1.89
TSEN54-201ENST00000333213 SMARCA1P28370 1054 aa26.88■■□□□ 1.89
TSEN54-201ENST00000333213 KIF23Q02241 960 aaPredicted RBP26.88■■□□□ 1.89
TSEN54-201ENST00000333213 SULF1Q8IWU6 871 aa26.88■■□□□ 1.89
TSEN54-201ENST00000333213 RIOX1Q9H6W3 641 aa26.88■■□□□ 1.89
TSEN54-201ENST00000333213 GDPD2Q9HCC8 539 aa26.88■■□□□ 1.89
TSEN54-201ENST00000333213 CNPY2Q9Y2B0 182 aa26.88■■□□□ 1.89
TSEN54-201ENST00000333213 ATP6V1DQ9Y5K8 247 aa26.88■■□□□ 1.89
TSEN54-201ENST00000333213 SCG2P13521 617 aa26.88■■□□□ 1.89
TSEN54-201ENST00000333213 ZC3H15Q8WU90 426 aaKnown RBP26.88■■□□□ 1.89
TSEN54-201ENST00000333213 IQCA1LA6NCM1 817 aa26.87■■□□□ 1.89
TSEN54-201ENST00000333213 KRT26Q7Z3Y9 468 aa26.87■■□□□ 1.89
TSEN54-201ENST00000333213 ZKSCAN4Q969J2 545 aaPredicted RBP26.87■■□□□ 1.89
TSEN54-201ENST00000333213 KLRG1Q96E93 195 aa26.87■■□□□ 1.89
TSEN54-201ENST00000333213 NUP88Q99567 741 aaPredicted RBP26.87■■□□□ 1.89
TSEN54-201ENST00000333213 ARHGEF10LQ9HCE6 1279 aa26.87■■□□□ 1.89
TSEN54-201ENST00000333213 SYNPO2Q9UMS6 1093 aa26.87■■□□□ 1.89
TSEN54-201ENST00000333213 MMP1P03956 469 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 SLC16A2P36021 539 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 SLC1A4P43007 532 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 CCDC96Q2M329 555 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 GPATCH4Q5T3I0 446 aaKnown RBP26.86■■□□□ 1.89
TSEN54-201ENST00000333213 DCAF4Q8WV16 495 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 HOOK2Q96ED9 719 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 WRNIP1Q96S55 665 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 VAT1LQ9HCJ6 419 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 TRIM29Q14134 588 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 SUPT20HL1Q3ZLR7 823 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 EAPPQ56P03 285 aaPredicted RBP26.86■■□□□ 1.89
TSEN54-201ENST00000333213 TYW1BQ6NUM6 668 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 SPICE1Q8N0Z3 855 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 GMCL1Q96IK5 515 aa26.86■■□□□ 1.89
TSEN54-201ENST00000333213 POTEIP0CG38 1075 aa26.85■■□□□ 1.89
TSEN54-201ENST00000333213 POTEJP0CG39 1038 aa26.85■■□□□ 1.89
TSEN54-201ENST00000333213 NPY5RQ15761 445 aa26.85■■□□□ 1.89
TSEN54-201ENST00000333213 GPKOWQ92917 476 aaPredicted RBP eCLIP26.85■■□□□ 1.89
TSEN54-201ENST00000333213 PIGSQ96S52 555 aa26.85■■□□□ 1.89
TSEN54-201ENST00000333213 PHF20Q9BVI0 1012 aa26.85■■□□□ 1.89
TSEN54-201ENST00000333213 RBM27Q9P2N5 1060 aaKnown RBP26.85■■□□□ 1.89
TSEN54-201ENST00000333213 USP2O75604 605 aaPredicted RBP26.84■■□□□ 1.89
TSEN54-201ENST00000333213 PRKG1Q13976 671 aa26.84■■□□□ 1.89
TSEN54-201ENST00000333213 BTBD18B2RXH4 712 aa26.84■■□□□ 1.89
TSEN54-201ENST00000333213 USP48Q86UV5 1035 aa26.84■■□□□ 1.89
TSEN54-201ENST00000333213 HOMER1Q86YM7 354 aa26.84■■□□□ 1.89
TSEN54-201ENST00000333213 ADGRF4Q8IZF3 695 aa26.84■■□□□ 1.89
TSEN54-201ENST00000333213 JMJD4Q9H9V9 463 aa26.84■■□□□ 1.89
TSEN54-201ENST00000333213 LMBRD1Q9NUN5 540 aa26.84■■□□□ 1.89
TSEN54-201ENST00000333213 U2AF2P26368 475 aaKnown RBP eCLIP26.83■■□□□ 1.89
TSEN54-201ENST00000333213 WWC2Q6AWC2 1192 aa26.83■■□□□ 1.89
TSEN54-201ENST00000333213 SCYL3Q8IZE3 742 aa26.83■■□□□ 1.89
TSEN54-201ENST00000333213 OXER1Q8TDS5 423 aa26.83■■□□□ 1.89
TSEN54-201ENST00000333213 TFIP11Q9UBB9 837 aaKnown RBP26.83■■□□□ 1.89
TSEN54-201ENST00000333213 DOCK1Q14185 1865 aa26.83■■□□□ 1.89
TSEN54-201ENST00000333213 ADAMTS3O15072 1205 aa26.82■■□□□ 1.88
TSEN54-201ENST00000333213 ZYXQ15942 572 aaKnown RBP26.82■■□□□ 1.88
TSEN54-201ENST00000333213 SKOR2Q2VWA4 1001 aaPredicted RBP26.82■■□□□ 1.88
TSEN54-201ENST00000333213 DIS3L2Q8IYB7 885 aaKnown RBP26.82■■□□□ 1.88
TSEN54-201ENST00000333213 VCPKMTQ9H867 229 aa26.82■■□□□ 1.88
TSEN54-201ENST00000333213 GINM1Q9NU53 330 aa26.82■■□□□ 1.88
TSEN54-201ENST00000333213 PRPF40AO75400 957 aaKnown RBP26.82■■□□□ 1.88
TSEN54-201ENST00000333213 MRE11P49959 708 aa26.82■■□□□ 1.88
TSEN54-201ENST00000333213 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.82■■□□□ 1.88
TSEN54-201ENST00000333213 USP17L10C9JJH3 530 aa26.81■■□□□ 1.88
TSEN54-201ENST00000333213 BMP3P12645 472 aa26.81■■□□□ 1.88
TSEN54-201ENST00000333213 NCLP19338 710 aaKnown RBP26.81■■□□□ 1.88
TSEN54-201ENST00000333213 NR5A1Q13285 461 aa26.81■■□□□ 1.88
TSEN54-201ENST00000333213 PNMA8AQ86V59 439 aaPredicted RBP26.81■■□□□ 1.88
TSEN54-201ENST00000333213 MTMR8Q96EF0 704 aa26.81■■□□□ 1.88
TSEN54-201ENST00000333213 RRP36Q96EU6 259 aaKnown RBP26.81■■□□□ 1.88
TSEN54-201ENST00000333213 FTOQ9C0B1 505 aaKnown RBP eCLIP26.81■■□□□ 1.88
TSEN54-201ENST00000333213 MYH15Q9Y2K3 1946 aa26.81■■□□□ 1.88
TSEN54-201ENST00000333213 FIBPO43427 364 aa26.8■■□□□ 1.88
TSEN54-201ENST00000333213 XRCC6P12956 609 aaKnown RBP eCLIP26.8■■□□□ 1.88
TSEN54-201ENST00000333213 XBP1P17861 261 aa26.8■■□□□ 1.88
TSEN54-201ENST00000333213 CDCA5Q96FF9 252 aa26.8■■□□□ 1.88
TSEN54-201ENST00000333213 BARHL2Q9NY43 387 aa26.8■■□□□ 1.88
TSEN54-201ENST00000333213 STXBP3O00186 592 aa26.8■■□□□ 1.88
TSEN54-201ENST00000333213 PTPRAP18433 802 aa26.8■■□□□ 1.88
TSEN54-201ENST00000333213 DGKZQ13574 1117 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms