RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 OSBPP22059 807 aa30.43■■■□□ 2.46
SMDT1-201ENST00000331479 IRX3P78415 501 aaPredicted RBP30.43■■■□□ 2.46
SMDT1-201ENST00000331479 PARK7Q99497 189 aaKnown RBP30.43■■■□□ 2.46
SMDT1-201ENST00000331479 C22orf23Q9BZE7 217 aa30.43■■■□□ 2.46
SMDT1-201ENST00000331479 TM6SF1Q9BZW5 370 aa30.43■■■□□ 2.46
SMDT1-201ENST00000331479 ZFYVE28Q9HCC9 887 aa30.43■■■□□ 2.46
SMDT1-201ENST00000331479 PNMA3Q9UL41 463 aa30.43■■■□□ 2.46
SMDT1-201ENST00000331479 PDHBP11177 359 aa30.42■■■□□ 2.46
SMDT1-201ENST00000331479 BMP3P12645 472 aa30.42■■■□□ 2.46
SMDT1-201ENST00000331479 SLC1A4P43007 532 aa30.42■■■□□ 2.46
SMDT1-201ENST00000331479 IL17RAQ96F46 866 aa30.42■■■□□ 2.46
SMDT1-201ENST00000331479 CFHR5Q9BXR6 569 aa30.42■■■□□ 2.46
SMDT1-201ENST00000331479 UPF3BQ9BZI7 483 aaKnown RBP30.42■■■□□ 2.46
SMDT1-201ENST00000331479 FBXO28Q9NVF7 368 aa30.42■■■□□ 2.46
SMDT1-201ENST00000331479 HSPA1AP0DMV8 641 aaKnown RBP30.41■■■□□ 2.46
SMDT1-201ENST00000331479 HSPA1BP0DMV9 641 aaKnown RBP30.41■■■□□ 2.46
SMDT1-201ENST00000331479 RUFY3Q7L099 469 aa30.41■■■□□ 2.46
SMDT1-201ENST00000331479 RLFQ13129 1914 aa30.41■■■□□ 2.46
SMDT1-201ENST00000331479 KCTD1Q719H9 257 aa30.41■■■□□ 2.46
SMDT1-201ENST00000331479 ADGRA2Q96PE1 1338 aa30.4■■■□□ 2.46
SMDT1-201ENST00000331479 TLR2O60603 784 aa30.4■■■□□ 2.46
SMDT1-201ENST00000331479 FLOT1O75955 427 aa30.4■■■□□ 2.46
SMDT1-201ENST00000331479 SNHG28P0DPA3 235 aa30.4■■■□□ 2.46
SMDT1-201ENST00000331479 LIFRP42702 1097 aa30.4■■■□□ 2.46
SMDT1-201ENST00000331479 POTEEQ6S8J3 1075 aa30.4■■■□□ 2.46
SMDT1-201ENST00000331479 SMCR8Q8TEV9 937 aaPredicted RBP30.4■■■□□ 2.46
SMDT1-201ENST00000331479 DCAF4Q8WV16 495 aa30.4■■■□□ 2.46
SMDT1-201ENST00000331479 CYP46A1Q9Y6A2 500 aa30.4■■■□□ 2.46
SMDT1-201ENST00000331479 HERVK_113P62684 666 aa30.39■■■□□ 2.46
SMDT1-201ENST00000331479 COG2Q14746 738 aa30.39■■■□□ 2.46
SMDT1-201ENST00000331479 ISY1Q9ULR0 285 aaKnown RBP30.39■■■□□ 2.46
SMDT1-201ENST00000331479 FRMPD2Q68DX3 1309 aaPredicted RBP30.39■■■□□ 2.46
SMDT1-201ENST00000331479 PARP14Q460N5 1801 aa30.39■■■□□ 2.46
SMDT1-201ENST00000331479 FOXN1O15353 648 aa30.38■■■□□ 2.45
SMDT1-201ENST00000331479 RBM25P49756 843 aaKnown RBP30.38■■■□□ 2.45
SMDT1-201ENST00000331479 CCDC96Q2M329 555 aa30.38■■■□□ 2.45
SMDT1-201ENST00000331479 Q6ZUG5 572 aa30.38■■■□□ 2.45
SMDT1-201ENST00000331479 UPF2Q9HAU5 1272 aaKnown RBP30.38■■■□□ 2.45
SMDT1-201ENST00000331479 CPA4Q9UI42 421 aa30.38■■■□□ 2.45
SMDT1-201ENST00000331479 SPDYE16A6NNV3 312 aaPredicted RBP30.37■■■□□ 2.45
SMDT1-201ENST00000331479 PEX10O60683 326 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 SAMD1Q6SPF0 538 aaPredicted RBP30.37■■■□□ 2.45
SMDT1-201ENST00000331479 NFXL1Q6ZNB6 911 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 TMTC2Q8N394 836 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 TMEM232C9JQI7 657 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 DSG3P32926 999 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 TROAPQ12815 778 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 TTBK2Q6IQ55 1244 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 C17orf99Q6UX52 265 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 SGMS1Q86VZ5 419 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 KIF2CQ99661 725 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 MYL10Q9BUA6 226 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 GPCPD1Q9NPB8 672 aa30.37■■■□□ 2.45
SMDT1-201ENST00000331479 CCDC69A6NI79 296 aa30.36■■■□□ 2.45
SMDT1-201ENST00000331479 GOLGA8HP0CJ92 632 aa30.36■■■□□ 2.45
SMDT1-201ENST00000331479 ZNF543Q08ER8 600 aa30.36■■■□□ 2.45
SMDT1-201ENST00000331479 CATIPQ7Z7H3 387 aa30.36■■■□□ 2.45
SMDT1-201ENST00000331479 ZNF654Q8IZM8 581 aa30.36■■■□□ 2.45
SMDT1-201ENST00000331479 ATG4CQ96DT6 458 aa30.36■■■□□ 2.45
SMDT1-201ENST00000331479 HOXC10Q9NYD6 342 aa30.36■■■□□ 2.45
SMDT1-201ENST00000331479 FEM1BQ9UK73 627 aa30.36■■■□□ 2.45
SMDT1-201ENST00000331479 FGD1P98174 961 aa30.35■■■□□ 2.45
SMDT1-201ENST00000331479 SLF1Q9BQI6 1058 aa30.35■■■□□ 2.45
SMDT1-201ENST00000331479 BRPF3Q9ULD4 1205 aa30.35■■■□□ 2.45
SMDT1-201ENST00000331479 PPP1R9AQ9ULJ8 1098 aa30.35■■■□□ 2.45
SMDT1-201ENST00000331479 FBXL16Q8N461 479 aa30.34■■■□□ 2.45
SMDT1-201ENST00000331479 ANKRD13CQ8N6S4 541 aa30.34■■■□□ 2.45
SMDT1-201ENST00000331479 AGXT2Q9BYV1 514 aa30.34■■■□□ 2.45
SMDT1-201ENST00000331479 TXNRD2Q9NNW7 524 aa30.34■■■□□ 2.45
SMDT1-201ENST00000331479 RBPJLQ9UBG7 517 aa30.34■■■□□ 2.45
SMDT1-201ENST00000331479 BCRP11274 1271 aa30.33■■■□□ 2.45
SMDT1-201ENST00000331479 STAT2P52630 851 aa30.33■■■□□ 2.45
SMDT1-201ENST00000331479 LBX2Q6XYB7 198 aa30.33■■■□□ 2.45
SMDT1-201ENST00000331479 RAB11FIP4Q86YS3 637 aa30.33■■■□□ 2.45
SMDT1-201ENST00000331479 BRF1Q92994 677 aa30.33■■■□□ 2.45
SMDT1-201ENST00000331479 KIFC2Q96AC6 838 aa30.33■■■□□ 2.45
SMDT1-201ENST00000331479 PDRG1Q9NUG6 133 aa30.33■■■□□ 2.45
SMDT1-201ENST00000331479 GPR25O00155 361 aa30.32■■■□□ 2.45
SMDT1-201ENST00000331479 SLC16A2P36021 539 aa30.32■■■□□ 2.45
SMDT1-201ENST00000331479 GCLCP48506 637 aaPredicted RBP30.32■■■□□ 2.45
SMDT1-201ENST00000331479 STAG2Q8N3U4 1231 aa30.32■■■□□ 2.45
SMDT1-201ENST00000331479 PRPF38AQ8NAV1 312 aaKnown RBP30.32■■■□□ 2.45
SMDT1-201ENST00000331479 NUP133Q8WUM0 1156 aa30.32■■■□□ 2.45
SMDT1-201ENST00000331479 TBC1D32Q96NH3 1257 aa30.32■■■□□ 2.45
SMDT1-201ENST00000331479 ADAMTS5Q9UNA0 930 aa30.32■■■□□ 2.45
SMDT1-201ENST00000331479 SLC12A7Q9Y666 1083 aa30.32■■■□□ 2.45
SMDT1-201ENST00000331479 MYPNQ86TC9 1320 aa30.32■■■□□ 2.44
SMDT1-201ENST00000331479 PARP1P09874 1014 aaKnown RBP30.32■■■□□ 2.44
SMDT1-201ENST00000331479 HSPA8P11142 646 aaKnown RBP30.32■■■□□ 2.44
SMDT1-201ENST00000331479 RXRAP19793 462 aa30.32■■■□□ 2.44
SMDT1-201ENST00000331479 APOBRQ0VD83 1088 aa30.32■■■□□ 2.44
SMDT1-201ENST00000331479 IKQ13123 557 aaPredicted RBP30.32■■■□□ 2.44
SMDT1-201ENST00000331479 TOB2Q14106 344 aaPredicted RBP30.32■■■□□ 2.44
SMDT1-201ENST00000331479 CPVLQ9H3G5 476 aa30.32■■■□□ 2.44
SMDT1-201ENST00000331479 MAD2L2Q9UI95 211 aa30.32■■■□□ 2.44
SMDT1-201ENST00000331479 PLA2G6O60733 806 aa30.31■■■□□ 2.44
SMDT1-201ENST00000331479 CNMDO75829 334 aa30.31■■■□□ 2.44
SMDT1-201ENST00000331479 GRM4Q14833 912 aa30.31■■■□□ 2.44
SMDT1-201ENST00000331479 GPATCH4Q5T3I0 446 aaKnown RBP30.31■■■□□ 2.44
SMDT1-201ENST00000331479 CHURC1Q8WUH1 139 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms