RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 KAT2BQ92831 832 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 RNF26Q9BY78 433 aaPredicted RBP12.66□□□□□ -0.38
GINS3-202ENST00000328514 CABP5Q9NP86 173 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 A1CFQ9NQ94 594 aaKnown RBP12.66□□□□□ -0.38
GINS3-202ENST00000328514 CTNND2Q9UQB3 1225 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 CHD4Q14839 1912 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 COL22A1Q8NFW1 1626 aaPredicted RBP12.66□□□□□ -0.38
GINS3-202ENST00000328514 XDHP47989 1333 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 ZNF532Q9HCE3 1301 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 ANKRD65E5RJM6 399 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 H7C1D1 291 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 KRT86O43790 486 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 APPP05067 770 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 PDE6AP16499 860 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 CDC25AP30304 524 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 SEMA3FQ13275 785 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 SMYD4Q8IYR2 804 aaPredicted RBP12.66□□□□□ -0.38
GINS3-202ENST00000328514 ZNF507Q8TCN5 953 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 OXER1Q8TDS5 423 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 JAKMIP2Q96AA8 810 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 CAPS2Q9BXY5 557 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 PLEKHA4Q9H4M7 779 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 HDAC6Q9UBN7 1215 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 RIPOR2Q9Y4F9 1068 aa12.66□□□□□ -0.38
GINS3-202ENST00000328514 TTC26A0AVF1 554 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 LGALS16A8MUM7 142 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
GINS3-202ENST00000328514 ZEB2O60315 1214 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 MYBL2P10244 700 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 PRLRP16471 622 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 ARID4AP29374 1257 aaPredicted RBP12.65□□□□□ -0.38
GINS3-202ENST00000328514 CCT5P48643 541 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 CABP4P57796 275 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 SART3Q15020 963 aaKnown RBP12.65□□□□□ -0.38
GINS3-202ENST00000328514 CCDC122Q5T0U0 273 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 ZNF658Q5TYW1 1059 aaPredicted RBP12.65□□□□□ -0.38
GINS3-202ENST00000328514 EMC10Q5UCC4 262 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 PDXDC2PQ6P474 469 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 WDR59Q6PJI9 974 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 TEX2Q8IWB9 1127 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 CCDC170Q8IYT3 715 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 CNPY4Q8N129 248 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 FANCBQ8NB91 859 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 STAG1Q8WVM7 1258 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 RIN2Q8WYP3 895 aaPredicted RBP12.65□□□□□ -0.38
GINS3-202ENST00000328514 PAGR1Q9BTK6 254 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 VPS16Q9H269 839 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 PIH1D3Q9NQM4 214 aaKnown RBP12.65□□□□□ -0.38
GINS3-202ENST00000328514 RMND1Q9NWS8 449 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 TRIM10Q9UDY6 481 aa12.65□□□□□ -0.38
GINS3-202ENST00000328514 LUC7L2Q9Y383 392 aaKnown RBP12.65□□□□□ -0.38
GINS3-202ENST00000328514 SHTN1A0MZ66 631 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 ENC1O14682 589 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 OPA1O60313 960 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 PCCAP05165 728 aaPredicted RBP12.64□□□□□ -0.39
GINS3-202ENST00000328514 XBP1P17861 261 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 EEF1GP26641 437 aaKnown RBP12.64□□□□□ -0.39
GINS3-202ENST00000328514 TNFRSF8P28908 595 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 HNRNPH1P31943 449 aaKnown RBP12.64□□□□□ -0.39
GINS3-202ENST00000328514 CDK17Q00537 523 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 ALS2CLQ60I27 953 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 CCDC70Q6NSX1 233 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 IRF2BP1Q8IU81 584 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 IFNL3Q8IZI9 196 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 MB21D1Q8N884 522 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 PRPF38AQ8NAV1 312 aaKnown RBP12.64□□□□□ -0.39
GINS3-202ENST00000328514 TACO1Q9BSH4 297 aaKnown RBP12.64□□□□□ -0.39
GINS3-202ENST00000328514 PHF20Q9BVI0 1012 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
GINS3-202ENST00000328514 TAB2Q9NYJ8 693 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 TACC3Q9Y6A5 838 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 PDS5AQ29RF7 1337 aaKnown RBP12.64□□□□□ -0.39
GINS3-202ENST00000328514 CASP1P29466 404 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 ATP2C1P98194 919 aaPredicted RBP12.64□□□□□ -0.39
GINS3-202ENST00000328514 UBXN1Q04323 297 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 WTAPQ15007 396 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 RRAGBQ5VZM2 374 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 KCNV1Q6PIU1 500 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 B4GALNT4Q76KP1 1039 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 VGLL2Q8N8G2 317 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 RETREG2Q8NC44 543 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 AIDAQ96BJ3 306 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 ZBTB9Q96C00 473 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 TTYH3Q9C0H2 523 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 NLRP2Q9NX02 1062 aa12.64□□□□□ -0.39
GINS3-202ENST00000328514 COL18A1P39060 1754 aa12.63□□□□□ -0.39
GINS3-202ENST00000328514 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
GINS3-202ENST00000328514 NUTM2EB1AL46 878 aaPredicted RBP12.63□□□□□ -0.39
GINS3-202ENST00000328514 PDE2AO00408 941 aaPredicted RBP12.63□□□□□ -0.39
GINS3-202ENST00000328514 CYLC1P35663 651 aaPredicted RBP12.63□□□□□ -0.39
GINS3-202ENST00000328514 KRT2P35908 639 aa12.63□□□□□ -0.39
GINS3-202ENST00000328514 DDR1Q08345 913 aa12.63□□□□□ -0.39
GINS3-202ENST00000328514 IFIT5Q13325 482 aaKnown RBP12.63□□□□□ -0.39
GINS3-202ENST00000328514 TCIRG1Q13488 830 aa12.63□□□□□ -0.39
GINS3-202ENST00000328514 EMBQ6PCB8 327 aa12.63□□□□□ -0.39
GINS3-202ENST00000328514 YTHDF3Q7Z739 585 aaKnown RBP12.63□□□□□ -0.39
GINS3-202ENST00000328514 BCAS4Q8TDM0 211 aa12.63□□□□□ -0.39
GINS3-202ENST00000328514 NELFBQ8WX92 580 aa12.63□□□□□ -0.39
GINS3-202ENST00000328514 TNFRSF25Q93038 417 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms