RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ATRNO75882 1429 aa14.33□□□□□ -0.11
CCDC60-201ENST00000327554 MYH2Q9UKX2 1941 aa14.33□□□□□ -0.11
CCDC60-201ENST00000327554 A6NNZ2 444 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 H0YHG0 523 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 KIAA0754O94854 1291 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 SNRPA1P09661 255 aaKnown RBP14.33□□□□□ -0.12
CCDC60-201ENST00000327554 UBXN1Q04323 297 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 TUBB8Q3ZCM7 444 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 RUBCNQ92622 972 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 ZNF622Q969S3 477 aaKnown RBP eCLIP14.33□□□□□ -0.12
CCDC60-201ENST00000327554 PURBQ96QR8 312 aaKnown RBP14.33□□□□□ -0.12
CCDC60-201ENST00000327554 LRRC1Q9BTT6 524 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 CABP5Q9NP86 173 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 INCENPQ9NQS7 918 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 MCM8Q9UJA3 840 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 SLC12A7Q9Y666 1083 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 XDHP47989 1333 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 FAM205CA6NFA0 338 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 KRT86O43790 486 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 ZEB2O60315 1214 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 IQCEQ6IPM2 695 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 YTHDF3Q7Z739 585 aaKnown RBP14.33□□□□□ -0.12
CCDC60-201ENST00000327554 KIAA1328Q86T90 577 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 CREG2Q8IUH2 290 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 STAMQ92783 540 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 ABCC12Q96J65 1359 aa14.33□□□□□ -0.12
CCDC60-201ENST00000327554 GLI3P10071 1580 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 RGPD5Q99666 1765 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 CHUKO15111 745 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 IDEP14735 1019 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 NAP1L1P55209 391 aaKnown RBP14.32□□□□□ -0.12
CCDC60-201ENST00000327554 KRT83P78385 493 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 RRAGBQ5VZM2 374 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 ALS2CLQ60I27 953 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 ZNF572Q7Z3I7 529 aaPredicted RBP14.32□□□□□ -0.12
CCDC60-201ENST00000327554 LUC7L2Q9Y383 392 aaKnown RBP14.32□□□□□ -0.12
CCDC60-201ENST00000327554 MYH10P35580 1976 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 ADD2P35612 726 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 PAK1Q13153 545 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 MEA1Q16626 185 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 PREPLQ4J6C6 727 aaPredicted RBP14.32□□□□□ -0.12
CCDC60-201ENST00000327554 CCDC70Q6NSX1 233 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 IRF2BP1Q8IU81 584 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 CAPN11Q9UMQ6 739 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 DUSP10Q9Y6W6 482 aa14.32□□□□□ -0.12
CCDC60-201ENST00000327554 EPHB4P54760 987 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 ITIH3Q06033 890 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 PPARAQ07869 468 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 NEDD9Q14511 834 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 NAA35Q5VZE5 725 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 TRIM22Q8IYM9 498 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 SH2D3CQ8N5H7 860 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 MB21D1Q8N884 522 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 NELFBQ8WX92 580 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 SHISA4Q96DD7 197 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 BLZF1Q9H2G9 400 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 JADE2Q9NQC1 790 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 CWC25Q9NXE8 425 aaPredicted RBP14.31□□□□□ -0.12
CCDC60-201ENST00000327554 VPS54Q9P1Q0 977 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 ZSWIM5Q9P217 1185 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 EID1Q9Y6B2 187 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 TRIM75PA6NK02 468 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 IFIT3O14879 490 aaKnown RBP14.31□□□□□ -0.12
CCDC60-201ENST00000327554 DEXIO95424 95 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 EMBQ6PCB8 327 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 FNBP4Q8N3X1 1017 aaPredicted RBP14.31□□□□□ -0.12
CCDC60-201ENST00000327554 CAVIN3Q969G5 261 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 VCPKMTQ9H867 229 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 SNX12Q9UMY4 172 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 TACC3Q9Y6A5 838 aa14.31□□□□□ -0.12
CCDC60-201ENST00000327554 CCDC189A1A4V9 331 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 RASSF9O75901 435 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 ELF1P32519 619 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 LSP1P33241 339 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 ATP1A2P50993 1020 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 SMTNP53814 917 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 KDM7AQ6ZMT4 941 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 CRACR2BQ8N4Y2 399 aaPredicted RBP14.3□□□□□ -0.12
CCDC60-201ENST00000327554 GIMAP7Q8NHV1 300 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 ZNF507Q8TCN5 953 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 ZIM3Q96PE6 472 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 EPN3Q9H201 632 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 A0A1W2PQC6 194 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 LGALS16A8MUM7 142 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 WNT7AO00755 349 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 HSF2BPO75031 334 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 MRPS25P82663 173 aaKnown RBP14.3□□□□□ -0.12
CCDC60-201ENST00000327554 SLC7A5Q01650 507 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 ACTN3Q08043 901 aaPredicted RBP14.3□□□□□ -0.12
CCDC60-201ENST00000327554 RTN1Q16799 776 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 EARS2Q5JPH6 523 aaKnown RBP14.3□□□□□ -0.12
CCDC60-201ENST00000327554 CMTR1Q8N1G2 835 aaKnown RBP14.3□□□□□ -0.12
CCDC60-201ENST00000327554 CCDC82Q8N4S0 544 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 RNPC3Q96LT9 517 aaKnown RBP14.3□□□□□ -0.12
CCDC60-201ENST00000327554 KLC4Q9NSK0 619 aa14.3□□□□□ -0.12
CCDC60-201ENST00000327554 PARP1P09874 1014 aaKnown RBP14.29□□□□□ -0.12
CCDC60-201ENST00000327554 KCNA6P17658 529 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms