RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 USP17L5A8MUK1 530 aa14.74□□□□□ -0.05
DDX39A-202ENST00000324340 CTNND1O60716 968 aaKnown RBP14.74□□□□□ -0.05
DDX39A-202ENST00000324340 SUPT20HL1Q3ZLR7 823 aa14.74□□□□□ -0.05
DDX39A-202ENST00000324340 PDLIM2Q96JY6 352 aa14.74□□□□□ -0.05
DDX39A-202ENST00000324340 C8orf76Q96K31 380 aa14.74□□□□□ -0.05
DDX39A-202ENST00000324340 ALG1Q9BT22 464 aa14.74□□□□□ -0.05
DDX39A-202ENST00000324340 SPZ1Q9BXG8 430 aa14.74□□□□□ -0.05
DDX39A-202ENST00000324340 ZNF341Q9BYN7 854 aa14.74□□□□□ -0.05
DDX39A-202ENST00000324340 RBM27Q9P2N5 1060 aaKnown RBP14.74□□□□□ -0.05
DDX39A-202ENST00000324340 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 H3BQV1 296 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 ZNF543Q08ER8 600 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 PKN1Q16512 942 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 SLC35G1Q2M3R5 365 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 GPATCH4Q5T3I0 446 aaKnown RBP14.73□□□□□ -0.05
DDX39A-202ENST00000324340 IFFO2Q5TF58 517 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 USP17L2Q6R6M4 530 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 PNMA8AQ86V59 439 aaPredicted RBP14.73□□□□□ -0.05
DDX39A-202ENST00000324340 SULF1Q8IWU6 871 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 CCDC82Q8N4S0 544 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 DCAF4Q8WV16 495 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 AIFM3Q96NN9 605 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 A0A1W2PRG0 241 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 KLRF2D3W0D1 207 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 UBE2Q2LH0YL09 131 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 CYTH3O43739 400 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 BAG4O95429 457 aaKnown RBP14.73□□□□□ -0.05
DDX39A-202ENST00000324340 RBM10P98175 930 aaKnown RBP14.73□□□□□ -0.05
DDX39A-202ENST00000324340 AKAP17AQ02040 695 aaKnown RBP14.73□□□□□ -0.05
DDX39A-202ENST00000324340 RASGRP2Q7LDG7 609 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 GAS2L3Q86XJ1 694 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 GMCL1Q96IK5 515 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 ZSCAN16Q9H4T2 348 aaPredicted RBP14.73□□□□□ -0.05
DDX39A-202ENST00000324340 RIOX1Q9H6W3 641 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 ARHGEF10LQ9HCE6 1279 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 TMX2Q9Y320 296 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 ATP6V1DQ9Y5K8 247 aa14.73□□□□□ -0.05
DDX39A-202ENST00000324340 V9GY48 417 aaPredicted RBP14.73□□□□□ -0.05
DDX39A-202ENST00000324340 F5H6K3 240 aa14.72□□□□□ -0.05
DDX39A-202ENST00000324340 GOLGA8HP0CJ92 632 aa14.72□□□□□ -0.05
DDX39A-202ENST00000324340 ATP2B2Q01814 1243 aa14.72□□□□□ -0.05
DDX39A-202ENST00000324340 KLRC3Q07444 240 aa14.72□□□□□ -0.05
DDX39A-202ENST00000324340 RESTQ13127 1097 aa14.72□□□□□ -0.05
DDX39A-202ENST00000324340 PFKFB3Q16875 520 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-202ENST00000324340 FOXD4L5Q5VV16 416 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-202ENST00000324340 PRAMEF18Q5VWM3 479 aa14.72□□□□□ -0.05
DDX39A-202ENST00000324340 SLFN13Q68D06 897 aa14.72□□□□□ -0.05
DDX39A-202ENST00000324340 KRT40Q6A162 431 aa14.72□□□□□ -0.05
DDX39A-202ENST00000324340 SASS6Q6UVJ0 657 aa14.72□□□□□ -0.05
DDX39A-202ENST00000324340 FOXD4L4Q8WXT5 416 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-202ENST00000324340 KLRG1Q96E93 195 aa14.72□□□□□ -0.05
DDX39A-202ENST00000324340 GTPBP4Q9BZE4 634 aaKnown RBP14.72□□□□□ -0.05
DDX39A-202ENST00000324340 MYH15Q9Y2K3 1946 aa14.71□□□□□ -0.05
DDX39A-202ENST00000324340 ADM5C9JUS6 153 aa14.71□□□□□ -0.06
DDX39A-202ENST00000324340 ECE1P42892 770 aa14.71□□□□□ -0.06
DDX39A-202ENST00000324340 NOL9Q5SY16 702 aaKnown RBP14.71□□□□□ -0.06
DDX39A-202ENST00000324340 KRT26Q7Z3Y9 468 aa14.71□□□□□ -0.06
DDX39A-202ENST00000324340 USP48Q86UV5 1035 aa14.71□□□□□ -0.06
DDX39A-202ENST00000324340 SCYL3Q8IZE3 742 aa14.71□□□□□ -0.06
DDX39A-202ENST00000324340 FAM177A1Q8N128 213 aaPredicted RBP14.71□□□□□ -0.06
DDX39A-202ENST00000324340 SH2D4AQ9H788 454 aa14.71□□□□□ -0.06
DDX39A-202ENST00000324340 KIF20AO95235 890 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 NDUFB10O96000 172 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 SCG2P13521 617 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 INPP5BP32019 993 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 SLC1A4P43007 532 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 DMTNQ08495 405 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 TRIM29Q14134 588 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 OTUD7BQ6GQQ9 843 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.7□□□□□ -0.063e-14■□□□□ 9.4
DDX39A-202ENST00000324340 ACER1Q8TDN7 264 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 CCDC94Q9BW85 323 aaPredicted RBP14.7□□□□□ -0.06
DDX39A-202ENST00000324340 GOPCQ9HD26 462 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 SH3GLB2Q9NR46 395 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 GJB4Q9NTQ9 266 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 MTMR7Q9Y216 660 aa14.7□□□□□ -0.06
DDX39A-202ENST00000324340 FRMPD2Q68DX3 1309 aaPredicted RBP14.7□□□□□ -0.06
DDX39A-202ENST00000324340 PHIPQ8WWQ0 1821 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 USP2O75604 605 aaPredicted RBP14.69□□□□□ -0.06
DDX39A-202ENST00000324340 MMP1P03956 469 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 XBP1P17861 261 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 FOSBP53539 338 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 GUCY1B3Q02153 619 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 TAF3Q5VWG9 929 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 FERMT3Q86UX7 667 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 SHISA4Q96DD7 197 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 MTMR8Q96EF0 704 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 WRNIP1Q96S55 665 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 PHF20Q9BVI0 1012 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 VCPKMTQ9H867 229 aa14.69□□□□□ -0.06
DDX39A-202ENST00000324340 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.69□□□□□ -0.06
DDX39A-202ENST00000324340 OTOFQ9HC10 1997 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 hCG_1642624A0A1W2PR95 340 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 VEGFAP15692 232 aaPredicted RBP14.68□□□□□ -0.06
DDX39A-202ENST00000324340 U2AF2P26368 475 aaKnown RBP eCLIP14.68□□□□□ -0.064e-9■□□□□ 9.1
DDX39A-202ENST00000324340 KIF23Q02241 960 aaPredicted RBP14.68□□□□□ -0.06
DDX39A-202ENST00000324340 CCDC96Q2M329 555 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 BTNL9Q6UXG8 535 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 BRAPQ7Z569 592 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 RRP36Q96EU6 259 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms