RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 UBAP1LF5GYI3 381 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 GSTA1P08263 222 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 GSTA2P09210 222 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 HP1BP3Q5SSJ5 553 aaPredicted RBP8.69□□□□□ -1.02
CIITA-201ENST00000324288 RDH13Q8NBN7 331 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 NRBP1Q9UHY1 535 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 CALCRLQ16602 461 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 CEP70Q8NHQ1 597 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 ST7Q9NRC1 585 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 ATRXP46100 2492 aa8.69□□□□□ -1.02
CIITA-201ENST00000324288 RNF8O76064 485 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 SUN1O94901 812 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 EEF1B2P24534 225 aaKnown RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 EEF1DP29692 281 aaKnown RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 LARSQ9P2J5 1176 aaKnown RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 MAP3K7O43318 606 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 SLC12A2P55011 1212 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 MORC3Q14149 939 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 TPH2Q8IWU9 490 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 HIPK4Q8NE63 616 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 RTCBQ9Y3I0 505 aaKnown RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 TAF5LO75529 589 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 TRAF1Q13077 416 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 MMEL1Q495T6 779 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 NAP1L4Q99733 375 aaKnown RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 NYXQ9GZU5 481 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 NUB1Q9Y5A7 615 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 LOC102724159A0A0B4J2E5 919 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 ABCB4P21439 1286 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 ADCY1Q08828 1119 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 SLC12A1Q13621 1099 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 PWP2Q15269 919 aaKnown RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 NSMFQ6X4W1 530 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 MAP3K1Q13233 1512 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 HERC4Q5GLZ8 1057 aaPredicted RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 JADE1Q6IE81 842 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 DDX17Q92841 729 aaKnown RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 TCHHQ07283 1943 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 SDK1Q7Z5N4 2213 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 ICE1Q9Y2F5 2266 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 LRGUKQ96M69 825 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 PAGR1Q9BTK6 254 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 IRAK4Q9NWZ3 460 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 CD2APQ9Y5K6 639 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 TMTC4Q5T4D3 741 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 SMYD2Q9NRG4 433 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 HMGB2P26583 209 aaKnown RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 CMTR1Q8N1G2 835 aaKnown RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 THAP12O43422 761 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 TIMM10P62072 90 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 ZC4H2Q9NQZ6 224 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 IDI1Q13907 227 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 FAM89AQ96GI7 184 aa8.68□□□□□ -1.02
CIITA-201ENST00000324288 MAGED2Q9UNF1 606 aaPredicted RBP8.68□□□□□ -1.02
CIITA-201ENST00000324288 ARHGAP6O43182 974 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 C2orf54Q08AI8 447 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 RBM17Q96I25 401 aaKnown RBP8.67□□□□□ -1.02
CIITA-201ENST00000324288 ASXL1Q8IXJ9 1541 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 PRPF6O94906 941 aaKnown RBP8.67□□□□□ -1.02
CIITA-201ENST00000324288 ATF7P17544 494 aaPredicted RBP8.67□□□□□ -1.02
CIITA-201ENST00000324288 GUCY2DQ02846 1103 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 KAZNQ674X7 775 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 CHMP6Q96FZ7 201 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 TNNI1P19237 187 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 ADCY8P40145 1251 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 IWS1Q96ST2 819 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 SCAF11Q99590 1463 aaKnown RBP8.67□□□□□ -1.02
CIITA-201ENST00000324288 POC1B-GALNT4F8VUJ3 575 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 EXOC3O60645 756 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 ACTN3Q08043 901 aaPredicted RBP8.67□□□□□ -1.02
CIITA-201ENST00000324288 PRPF38AQ8NAV1 312 aaKnown RBP8.67□□□□□ -1.02
CIITA-201ENST00000324288 RSAD2Q8WXG1 361 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 NBPF3Q9H094 633 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 PLCD1P51178 756 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 EHHADHQ08426 723 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 DDB1Q16531 1140 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 PPP4R4Q6NUP7 873 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 CNBD1Q8NA66 436 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 RIOK1Q9BRS2 568 aaKnown RBP8.67□□□□□ -1.02
CIITA-201ENST00000324288 ARHGEF10LQ9HCE6 1279 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 ZC3H18Q86VM9 953 aaKnown RBP8.67□□□□□ -1.02
CIITA-201ENST00000324288 HDAC11Q96DB2 347 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 PALMDQ9NP74 551 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 CXCR5P32302 372 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 FAM102BQ5T8I3 360 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 LGSNQ5TDP6 509 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 SCYL2Q6P3W7 929 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 SRGAP1Q7Z6B7 1085 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 NSMCE1Q8WV22 266 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 FAM227BQ96M60 508 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 SERTAD1Q9UHV2 236 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 ZNF711Q9Y462 761 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 WDR7Q9Y4E6 1490 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 KLHL30Q0D2K2 578 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 PLCB4Q15147 1175 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 TBC1D10BQ4KMP7 808 aaPredicted RBP8.67□□□□□ -1.02
CIITA-201ENST00000324288 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.67□□□□□ -1.02
CIITA-201ENST00000324288 NR1I2O75469 434 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 KRT10P13645 584 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms