RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 SIAH1Q8IUQ4 282 aa27.72■■■□□ 2.03
TNFSF12-202ENST00000322272 ZNF444Q8N0Y2 327 aaPredicted RBP27.72■■■□□ 2.03
TNFSF12-202ENST00000322272 TMEM87BQ96K49 555 aa27.72■■■□□ 2.03
TNFSF12-202ENST00000322272 KANSL2Q9H9L4 492 aa27.72■■■□□ 2.03
TNFSF12-202ENST00000322272 ARHGEF10LQ9HCE6 1279 aa27.72■■■□□ 2.03
TNFSF12-202ENST00000322272 FGRP09769 529 aa27.71■■■□□ 2.03
TNFSF12-202ENST00000322272 VCAM1P19320 739 aa27.71■■■□□ 2.03
TNFSF12-202ENST00000322272 PSMC4P43686 418 aa27.71■■■□□ 2.03
TNFSF12-202ENST00000322272 P2RX7Q99572 595 aaKnown RBP27.71■■■□□ 2.03
TNFSF12-202ENST00000322272 INCENPQ9NQS7 918 aa27.71■■■□□ 2.03
TNFSF12-202ENST00000322272 HPS5Q9UPZ3 1129 aa27.71■■■□□ 2.03
TNFSF12-202ENST00000322272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.71■■■□□ 2.03
TNFSF12-202ENST00000322272 RANBP6O60518 1105 aaKnown RBP27.7■■■□□ 2.03
TNFSF12-202ENST00000322272 KDM4AO75164 1064 aa27.7■■■□□ 2.03
TNFSF12-202ENST00000322272 CTGFP29279 349 aa27.7■■■□□ 2.03
TNFSF12-202ENST00000322272 GCLCP48506 637 aaPredicted RBP27.7■■■□□ 2.03
TNFSF12-202ENST00000322272 ATP2B2Q01814 1243 aa27.7■■■□□ 2.03
TNFSF12-202ENST00000322272 CYB5R4Q7L1T6 521 aa27.7■■■□□ 2.03
TNFSF12-202ENST00000322272 MTA3Q9BTC8 594 aa27.7■■■□□ 2.03
TNFSF12-202ENST00000322272 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.7■■■□□ 2.03
TNFSF12-202ENST00000322272 PTPN22Q9Y2R2 807 aa27.7■■■□□ 2.03
TNFSF12-202ENST00000322272 TACC3Q9Y6A5 838 aa27.7■■■□□ 2.03
TNFSF12-202ENST00000322272 CCDC85CA6NKD9 419 aa27.7■■■□□ 2.02
TNFSF12-202ENST00000322272 EEF2P13639 858 aaKnown RBP27.7■■■□□ 2.02
TNFSF12-202ENST00000322272 CCDC83Q8IWF9 413 aa27.7■■■□□ 2.02
TNFSF12-202ENST00000322272 USP17L15C9J2P7 530 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 USP17L13C9JLJ4 530 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 USP17L11C9JVI0 530 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 USP17L18D6R9N7 530 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 USP17L22D6RA61 530 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 USP17L17D6RBQ6 530 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 USP17L19D6RCP7 530 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 USP17L20D6RJB6 530 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 FMNL1O95466 1100 aaPredicted RBP27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 USP17L24Q0WX57 530 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 FAM110CQ1W6H9 321 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 TRIM47Q96LD4 638 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 SH2D4AQ9H788 454 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 TMX2Q9Y320 296 aa27.69■■■□□ 2.02
TNFSF12-202ENST00000322272 EVCP57679 992 aa27.68■■■□□ 2.02
TNFSF12-202ENST00000322272 HERVK_113P62684 666 aa27.68■■■□□ 2.02
TNFSF12-202ENST00000322272 APOBRQ0VD83 1088 aa27.68■■■□□ 2.02
TNFSF12-202ENST00000322272 SART3Q15020 963 aaKnown RBP27.68■■■□□ 2.02
TNFSF12-202ENST00000322272 RPAP3Q9H6T3 665 aaPredicted RBP27.68■■■□□ 2.02
TNFSF12-202ENST00000322272 HTTP42858 3142 aa27.68■■■□□ 2.02
TNFSF12-202ENST00000322272 TSPY2A6NKD2 308 aa27.67■■■□□ 2.02
TNFSF12-202ENST00000322272 SH2B2O14492 632 aaPredicted RBP27.67■■■□□ 2.02
TNFSF12-202ENST00000322272 GNRH1P01148 92 aa27.67■■■□□ 2.02
TNFSF12-202ENST00000322272 GTF3C6Q969F1 213 aa27.67■■■□□ 2.02
TNFSF12-202ENST00000322272 ZNF274Q96GC6 653 aaPredicted RBP27.67■■■□□ 2.02
TNFSF12-202ENST00000322272 ZSWIM5Q9P217 1185 aa27.67■■■□□ 2.02
TNFSF12-202ENST00000322272 FCGRTP55899 365 aa27.67■■■□□ 2.02
TNFSF12-202ENST00000322272 CATSPERGQ6ZRH7 1159 aa27.67■■■□□ 2.02
TNFSF12-202ENST00000322272 CHMP4CQ96CF2 233 aa27.67■■■□□ 2.02
TNFSF12-202ENST00000322272 ZSWIM8A7E2V4 1837 aa27.67■■■□□ 2.02
TNFSF12-202ENST00000322272 TSPY3P0CV98 308 aa27.66■■■□□ 2.02
TNFSF12-202ENST00000322272 TSPY8P0CW00 308 aa27.66■■■□□ 2.02
TNFSF12-202ENST00000322272 KIAA1755Q5JYT7 1200 aa27.66■■■□□ 2.02
TNFSF12-202ENST00000322272 IQCA1Q86XH1 822 aa27.66■■■□□ 2.02
TNFSF12-202ENST00000322272 SPICE1Q8N0Z3 855 aa27.66■■■□□ 2.02
TNFSF12-202ENST00000322272 NECAB1Q8N987 351 aa27.66■■■□□ 2.02
TNFSF12-202ENST00000322272 VCPKMTQ9H867 229 aa27.66■■■□□ 2.02
TNFSF12-202ENST00000322272 PFKFB2O60825 505 aa27.65■■■□□ 2.02
TNFSF12-202ENST00000322272 ST3GAL1Q11201 340 aa27.65■■■□□ 2.02
TNFSF12-202ENST00000322272 TMEM67Q5HYA8 995 aa27.65■■■□□ 2.02
TNFSF12-202ENST00000322272 FAM47AQ5JRC9 791 aa27.65■■■□□ 2.02
TNFSF12-202ENST00000322272 LPAR1Q92633 364 aa27.65■■■□□ 2.02
TNFSF12-202ENST00000322272 UBAC1Q9BSL1 405 aa27.65■■■□□ 2.02
TNFSF12-202ENST00000322272 SMC3Q9UQE7 1217 aa27.65■■■□□ 2.02
TNFSF12-202ENST00000322272 ERICH2A1L162 156 aa27.64■■■□□ 2.02
TNFSF12-202ENST00000322272 IFIT3O14879 490 aaKnown RBP27.64■■■□□ 2.02
TNFSF12-202ENST00000322272 NUCB2P80303 420 aa27.64■■■□□ 2.02
TNFSF12-202ENST00000322272 TFAP4Q01664 338 aa27.64■■■□□ 2.02
TNFSF12-202ENST00000322272 STK3Q13188 491 aa27.64■■■□□ 2.02
TNFSF12-202ENST00000322272 NKX2-3Q8TAU0 364 aa27.64■■■□□ 2.02
TNFSF12-202ENST00000322272 PTCH2Q9Y6C5 1203 aa27.64■■■□□ 2.02
TNFSF12-202ENST00000322272 PEX10O60683 326 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 HOXD10P28358 340 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 LIFRP42702 1097 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 NEDD1Q8NHV4 660 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 TANGO6Q9C0B7 1094 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 TXNRD2Q9NNW7 524 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 GPHNQ9NQX3 736 aaPredicted RBP27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 NYAP2Q9P242 653 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 MORF4L1Q9UBU8 362 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 IGKV6D-41A0A0C4DH26 115 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 KLF18A0A0U1RQI7 1052 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 RAD21O60216 631 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 IGDCC4Q8TDY8 1250 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 GTF3C2Q8WUA4 911 aaPredicted RBP27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 CEP95Q96GE4 821 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 RBPJLQ9UBG7 517 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 SRRDQ9UH36 339 aa27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 NAP1L2Q9ULW6 460 aaPredicted RBP27.63■■■□□ 2.01
TNFSF12-202ENST00000322272 TNPO2O14787 897 aaKnown RBP27.62■■■□□ 2.01
TNFSF12-202ENST00000322272 PDIA3P30101 505 aaKnown RBP27.62■■■□□ 2.01
TNFSF12-202ENST00000322272 SGMS1Q86VZ5 419 aa27.62■■■□□ 2.01
TNFSF12-202ENST00000322272 PAGR1Q9BTK6 254 aa27.62■■■□□ 2.01
TNFSF12-202ENST00000322272 LY9Q9HBG7 655 aa27.62■■■□□ 2.01
TNFSF12-202ENST00000322272 GOPCQ9HD26 462 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms