RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CDC25BP30305 580 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 TRIM50Q86XT4 487 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 IFT88Q13099 833 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 ATP8B1O43520 1251 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 DNM2P50570 870 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 DEUP1Q05D60 604 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 KMT5BQ4FZB7 885 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 WDR7Q9Y4E6 1490 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 ADAMTS2O95450 1211 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 GARSP41250 739 aaKnown RBP18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 CNOT10Q9H9A5 744 aaKnown RBP18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 NCOA5Q9HCD5 579 aaKnown RBP18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 ABCA10Q8WWZ4 1543 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 IFNB1P01574 187 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 CCT5P48643 541 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 LMNB2Q03252 620 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 PPWD1Q96BP3 646 aaKnown RBP18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 LRRC23Q53EV4 343 aaPredicted RBP18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 NCAPH2Q6IBW4 605 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 SCYL3Q8IZE3 742 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 SCYL1Q96KG9 808 aa18.5■□□□□ 0.55
SMCHD1-201ENST00000320876 GOLGA8CPA6NN73 597 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 ZCRB1Q8TBF4 217 aaKnown RBP18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 PRPF6O94906 941 aaKnown RBP18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 REXO1Q8N1G1 1221 aaKnown RBP18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 TRIM42Q8IWZ5 723 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 MIS12Q9H081 205 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 LRWD1Q9UFC0 647 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 SNX14Q9Y5W7 946 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 ADALQ6DHV7 355 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 EFHD1Q9BUP0 239 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 C14orf93Q9H972 538 aaKnown RBP18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 UGGT2Q9NYU1 1516 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 HSPA8P11142 646 aaKnown RBP18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 TRIML1Q8N9V2 468 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 CD109Q6YHK3 1445 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 HELBQ8NG08 1087 aaPredicted RBP18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 WDR70Q9NW82 654 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 NUB1Q9Y5A7 615 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 TRPM2O94759 1503 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 RINT1Q6NUQ1 792 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 TRPC6Q9Y210 931 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 SCINQ9Y6U3 715 aa18.49■□□□□ 0.55
SMCHD1-201ENST00000320876 ATF7P17544 494 aaPredicted RBP18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 PDE6CP51160 858 aa18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 BRDTQ58F21 947 aaPredicted RBP18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 IRS4O14654 1257 aaPredicted RBP18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 DIS3L2Q8IYB7 885 aaKnown RBP18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 CDKL2Q92772 493 aa18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 TMED1Q13445 227 aa18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 PDZD4Q76G19 769 aaPredicted RBP18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 ZC3H12CQ9C0D7 883 aaKnown RBP18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 BZW2Q9Y6E2 419 aaKnown RBP18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 V9GY48 417 aaPredicted RBP18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 KRT28Q7Z3Y7 464 aa18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 U2AF1L4Q8WU68 220 aaKnown RBP18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 LMNB1P20700 586 aa18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 DESI2Q9BSY9 194 aa18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 CPA1P15085 419 aa18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 NGLY1Q96IV0 654 aa18.48■□□□□ 0.55
SMCHD1-201ENST00000320876 NR1I2O75469 434 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 KLHDC4Q8TBB5 520 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 ZNF215Q9UL58 517 aaPredicted RBP18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 FANCAO15360 1455 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 MAP3K7O43318 606 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 PLCH2O75038 1416 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 TPTE2Q6XPS3 522 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 HAUS4Q9H6D7 363 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 PICK1Q9NRD5 415 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 INTS9Q9NV88 658 aaKnown RBP18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 ABCB4P21439 1286 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 NONOQ15233 471 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 MRFAP1L1Q96HT8 127 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 CSRNP1Q96S65 589 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 SKIP12755 728 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 ANGPTL2Q9UKU9 493 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 ZMYM3Q14202 1370 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 GPAA1O43292 621 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 TNNI1P19237 187 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 PHLPP2Q6ZVD8 1323 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 RSBN1LQ6PCB5 846 aaPredicted RBP18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 TUBB6Q9BUF5 446 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 MAST1Q9Y2H9 1570 aa18.47■□□□□ 0.55
SMCHD1-201ENST00000320876 PLEKHA4Q9H4M7 779 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 URB2Q14146 1524 aaKnown RBP18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 HADHQ16836 314 aaKnown RBP18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 CWF19L2Q2TBE0 894 aaKnown RBP18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 TEX11Q8IYF3 940 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 PHKBQ93100 1093 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 RPSAP08865 295 aaKnown RBP18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 ASPHQ12797 758 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 SEPT2Q15019 361 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 EYA3Q99504 573 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 SCHIP1Q9P0W5 487 aaPredicted RBP18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 TRMT44Q8IYL2 757 aaKnown RBP18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 APPBP2Q92624 585 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 N4BP2L2Q92802 583 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms