RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 VPS33BQ9H267 617 aa19.45■□□□□ 0.7
SSR4-201ENST00000320857 MTMR4Q9NYA4 1195 aa19.45■□□□□ 0.7
SSR4-201ENST00000320857 SERPINA10Q9UK55 444 aa19.45■□□□□ 0.7
SSR4-201ENST00000320857 PCDHA4Q9UN74 947 aa19.45■□□□□ 0.7
SSR4-201ENST00000320857 PSME4Q14997 1843 aa19.45■□□□□ 0.7
SSR4-201ENST00000320857 BECN2A8MW95 431 aa19.44■□□□□ 0.7
SSR4-201ENST00000320857 AP5Z1O43299 807 aa19.44■□□□□ 0.7
SSR4-201ENST00000320857 NLRP12P59046 1061 aa19.44■□□□□ 0.7
SSR4-201ENST00000320857 SOGA3Q5TF21 947 aa19.44■□□□□ 0.7
SSR4-201ENST00000320857 KRBA2Q6ZNG9 492 aa19.44■□□□□ 0.7
SSR4-201ENST00000320857 BCS1LQ9Y276 419 aa19.44■□□□□ 0.7
SSR4-201ENST00000320857 ZKSCAN5Q9Y2L8 839 aa19.44■□□□□ 0.7
SSR4-201ENST00000320857 IGKV6D-41A0A0C4DH26 115 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 YDJCA8MPS7 323 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 AKR1B1P15121 316 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 RBM5P52756 815 aaKnown RBP eCLIP19.43■□□□□ 0.7
SSR4-201ENST00000320857 DAGLBQ8NCG7 672 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 CNNM3Q8NE01 707 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 CCDC12Q8WUD4 166 aaPredicted RBP19.43■□□□□ 0.7
SSR4-201ENST00000320857 ERCC4Q92889 916 aaPredicted RBP19.43■□□□□ 0.7
SSR4-201ENST00000320857 DHX36Q9H2U1 1008 aaKnown RBP19.43■□□□□ 0.7
SSR4-201ENST00000320857 GOLGA6L6A8MZA4 724 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 CYTH3O43739 400 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
SSR4-201ENST00000320857 VEGFAP15692 232 aaPredicted RBP19.43■□□□□ 0.7
SSR4-201ENST00000320857 SLC35G1Q2M3R5 365 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 DALRD3Q5D0E6 543 aaKnown RBP19.43■□□□□ 0.7
SSR4-201ENST00000320857 PIK3AP1Q6ZUJ8 805 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 HEATR3Q7Z4Q2 680 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 GPKOWQ92917 476 aaPredicted RBP eCLIP19.43■□□□□ 0.7
SSR4-201ENST00000320857 RRP36Q96EU6 259 aaKnown RBP19.43■□□□□ 0.7
SSR4-201ENST00000320857 BPIFA3Q9BQP9 254 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 IDI2Q9BXS1 227 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 BARHL2Q9NY43 387 aa19.43■□□□□ 0.7
SSR4-201ENST00000320857 TPM3P06753 285 aa19.42■□□□□ 0.7
SSR4-201ENST00000320857 GOLGA8HP0CJ92 632 aa19.42■□□□□ 0.7
SSR4-201ENST00000320857 SHMT1P34896 483 aa19.42■□□□□ 0.7
SSR4-201ENST00000320857 ZNF174Q15697 407 aa19.42■□□□□ 0.7
SSR4-201ENST00000320857 WWC2Q6AWC2 1192 aa19.42■□□□□ 0.7
SSR4-201ENST00000320857 CCDC17Q96LX7 622 aa19.42■□□□□ 0.7
SSR4-201ENST00000320857 TUBE1Q9UJT0 475 aa19.42■□□□□ 0.7
SSR4-201ENST00000320857 STXBP3O00186 592 aa19.41■□□□□ 0.7
SSR4-201ENST00000320857 TTLL1O95922 423 aa19.41■□□□□ 0.7
SSR4-201ENST00000320857 GRIN1Q05586 938 aa19.41■□□□□ 0.7
SSR4-201ENST00000320857 NFIAQ12857 509 aa19.41■□□□□ 0.7
SSR4-201ENST00000320857 LONRF3Q496Y0 759 aa19.41■□□□□ 0.7
SSR4-201ENST00000320857 ASPRV1Q53RT3 343 aa19.41■□□□□ 0.7
SSR4-201ENST00000320857 KANK3Q6NY19 840 aa19.41■□□□□ 0.7
SSR4-201ENST00000320857 USP17L2Q6R6M4 530 aa19.41■□□□□ 0.7
SSR4-201ENST00000320857 CCDC34Q96HJ3 373 aa19.41■□□□□ 0.7
SSR4-201ENST00000320857 CSRNP2Q9H175 543 aa19.41■□□□□ 0.7
SSR4-201ENST00000320857 SEC63Q9UGP8 760 aaKnown RBP19.41■□□□□ 0.7
SSR4-201ENST00000320857 ATP2C1P98194 919 aaPredicted RBP19.4■□□□□ 0.7
SSR4-201ENST00000320857 SPECC1Q5M775 1068 aa19.4■□□□□ 0.7
SSR4-201ENST00000320857 SARM1Q6SZW1 724 aa19.4■□□□□ 0.7
SSR4-201ENST00000320857 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.4■□□□□ 0.7
SSR4-201ENST00000320857 DHX40Q8IX18 779 aaKnown RBP19.4■□□□□ 0.7
SSR4-201ENST00000320857 TRIM5Q9C035 493 aa19.4■□□□□ 0.7
SSR4-201ENST00000320857 CCDC194A0A1B0GVG4 234 aa19.4■□□□□ 0.7
SSR4-201ENST00000320857 USP17L5A8MUK1 530 aa19.4■□□□□ 0.7
SSR4-201ENST00000320857 PDHBP11177 359 aa19.4■□□□□ 0.7
SSR4-201ENST00000320857 ZNF75DP51815 510 aa19.4■□□□□ 0.7
SSR4-201ENST00000320857 NOM1Q5C9Z4 860 aaKnown RBP19.4■□□□□ 0.7
SSR4-201ENST00000320857 LARGE2Q8N3Y3 721 aa19.4■□□□□ 0.7
SSR4-201ENST00000320857 PCDHAC2Q9Y5I4 1007 aa19.4■□□□□ 0.7
SSR4-201ENST00000320857 hCG_1984214I3L0E3 225 aa19.39■□□□□ 0.69
SSR4-201ENST00000320857 POLR2DO15514 142 aaKnown RBP19.39■□□□□ 0.69
SSR4-201ENST00000320857 DPCR1Q3MIW9 517 aa19.39■□□□□ 0.69
SSR4-201ENST00000320857 RSBN1LQ6PCB5 846 aaPredicted RBP19.39■□□□□ 0.69
SSR4-201ENST00000320857 METTL16Q86W50 562 aaKnown RBP19.39■□□□□ 0.69
SSR4-201ENST00000320857 PLA2G4DQ86XP0 818 aa19.39■□□□□ 0.69
SSR4-201ENST00000320857 ZNF713Q8N859 430 aaPredicted RBP19.39■□□□□ 0.69
SSR4-201ENST00000320857 ZNF277Q9NRM2 450 aaPredicted RBP19.39■□□□□ 0.69
SSR4-201ENST00000320857 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.39■□□□□ 0.69
SSR4-201ENST00000320857 PI4KBQ9UBF8 816 aa19.39■□□□□ 0.69
SSR4-201ENST00000320857 CLIP2Q9UDT6 1046 aa19.39■□□□□ 0.69
SSR4-201ENST00000320857 MYH8P13535 1937 aa19.39■□□□□ 0.69
SSR4-201ENST00000320857 GOLGB1Q14789 3259 aaKnown RBP19.38■□□□□ 0.69
SSR4-201ENST00000320857 A0A087WWV3 80 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 M0R2N6 131 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 BIN1O00499 593 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 SNHG28P0DPA3 235 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 TPM4P67936 248 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 PTGDRQ13258 359 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 PNOCQ13519 176 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 TYW1BQ6NUM6 668 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 LRRC47Q8N1G4 583 aaKnown RBP19.38■□□□□ 0.69
SSR4-201ENST00000320857 AOPEPQ8N6M6 819 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 TRIM34Q9BYJ4 488 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 RIOX1Q9H6W3 641 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 FAM198AQ9UFP1 575 aa19.38■□□□□ 0.69
SSR4-201ENST00000320857 BRCA1P38398 1863 aaKnown RBP19.38■□□□□ 0.69
SSR4-201ENST00000320857 SMTNL1A8MU46 457 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 MPHOSPH10O00566 681 aaKnown RBP19.37■□□□□ 0.69
SSR4-201ENST00000320857 WNT7AO00755 349 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 VIL1P09327 827 aaKnown RBP19.37■□□□□ 0.69
SSR4-201ENST00000320857 GNA11P29992 359 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 NAPAP54920 295 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 GPR162Q16538 588 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 ZFPM1Q8IX07 1006 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms