RNA–Protein interactions for RNA: ENST00000319380.11

UBE2O-201, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2O, Length 5,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-201ENST00000319380 PABPC4Q13310 644 aaKnown RBP eCLIP19.34■□□□□ 0.693e-6■■■□□ 16.2
UBE2O-201ENST00000319380 FAM207AQ9NSI2 230 aaPredicted RBP19.34■□□□□ 0.69
UBE2O-201ENST00000319380 EAPPQ56P03 285 aaPredicted RBP19.34■□□□□ 0.69
UBE2O-201ENST00000319380 KRT40Q6A162 431 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 ANKRD42Q8N9B4 389 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 PAGR1Q9BTK6 254 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 NLRC4Q9NPP4 1024 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 ARHGAP42A6NI28 874 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 STAM2O75886 525 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 ALDH1B1P30837 517 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 U2AF1L4Q8WU68 220 aaKnown RBP19.34■□□□□ 0.69
UBE2O-201ENST00000319380 SLF1Q9BQI6 1058 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 HOMER3Q9NSC5 361 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 TFAP4Q01664 338 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 LONRF3Q496Y0 759 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 SAMD9Q5K651 1589 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 GOLGA5Q8TBA6 731 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 TESPA1A2RU30 521 aaPredicted RBP19.34■□□□□ 0.69
UBE2O-201ENST00000319380 PDE1CQ14123 709 aaPredicted RBP19.34■□□□□ 0.69
UBE2O-201ENST00000319380 ZNF790Q6PG37 636 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 TSPYL6Q8N831 410 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 RPGRIP1Q96KN7 1286 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 MMS19Q96T76 1030 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 C1orf112Q9NSG2 853 aa19.34■□□□□ 0.69
UBE2O-201ENST00000319380 IP6K1Q92551 441 aa19.33■□□□□ 0.69
UBE2O-201ENST00000319380 SDCCAG3Q96C92 435 aa19.33■□□□□ 0.69
UBE2O-201ENST00000319380 DDX41Q9UJV9 622 aaKnown RBP19.33■□□□□ 0.69
UBE2O-201ENST00000319380 KAT6BQ8WYB5 2073 aa19.33■□□□□ 0.69
UBE2O-201ENST00000319380 N4BP1O75113 896 aaKnown RBP19.33■□□□□ 0.69
UBE2O-201ENST00000319380 NBPF3Q9H094 633 aa19.33■□□□□ 0.69
UBE2O-201ENST00000319380 FAM102BQ5T8I3 360 aa19.33■□□□□ 0.68
UBE2O-201ENST00000319380 SKA2Q8WVK7 121 aaPredicted RBP19.33■□□□□ 0.68
UBE2O-201ENST00000319380 IPO11Q9UI26 975 aaKnown RBP19.33■□□□□ 0.68
UBE2O-201ENST00000319380 GPATCH8Q9UKJ3 1502 aaKnown RBP19.33■□□□□ 0.68
UBE2O-201ENST00000319380 PPIP5K2O43314 1243 aa19.33■□□□□ 0.68
UBE2O-201ENST00000319380 SMIM24O75264 130 aa19.33■□□□□ 0.68
UBE2O-201ENST00000319380 TYW1BQ6NUM6 668 aa19.33■□□□□ 0.68
UBE2O-201ENST00000319380 KBTBD3Q8NAB2 608 aa19.33■□□□□ 0.68
UBE2O-201ENST00000319380 TGFBRAP1Q8WUH2 860 aa19.33■□□□□ 0.68
UBE2O-201ENST00000319380 ARHGEF16Q5VV41 709 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 SCYL1Q96KG9 808 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 KLHL14Q9P2G3 628 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 PNMA2Q9UL42 364 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 TCOF1Q13428 1488 aaKnown RBP19.32■□□□□ 0.68
UBE2O-201ENST00000319380 PSPC1Q8WXF1 523 aaKnown RBP19.32■□□□□ 0.68
UBE2O-201ENST00000319380 UIMC1Q96RL1 719 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 XPAP23025 273 aaPredicted RBP19.32■□□□□ 0.68
UBE2O-201ENST00000319380 CYP2J2P51589 502 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 KRT24Q2M2I5 525 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 TMTC4Q5T4D3 741 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 GPIHBP1Q8IV16 184 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 TRIM56Q9BRZ2 755 aaKnown RBP19.32■□□□□ 0.68
UBE2O-201ENST00000319380 IGSF3O75054 1194 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 OTUD7BQ6GQQ9 843 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 MGARPQ8TDB4 240 aa19.32■□□□□ 0.68
UBE2O-201ENST00000319380 TAF5LO75529 589 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 DCAF15Q66K64 600 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 SPATA5Q8NB90 893 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 ZBTB40Q9NUA8 1239 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 MROH5Q6ZUA9 1318 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 BBS5Q8N3I7 341 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 CHMP6Q96FZ7 201 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 MYL10Q9BUA6 226 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 RABEP2Q9H5N1 569 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 TMOD1P28289 359 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 ADCY8P40145 1251 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 CTDSPL2Q05D32 466 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 PSDA5PKW4 1024 aaPredicted RBP19.31■□□□□ 0.68
UBE2O-201ENST00000319380 SMCO2A6NFE2 343 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 TSTA3Q13630 321 aaPredicted RBP19.31■□□□□ 0.68
UBE2O-201ENST00000319380 C2CD5Q86YS7 1000 aa19.31■□□□□ 0.68
UBE2O-201ENST00000319380 LSM14BQ9BX40 385 aaKnown RBP19.31■□□□□ 0.68
UBE2O-201ENST00000319380 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.31■□□□□ 0.68
UBE2O-201ENST00000319380 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
UBE2O-201ENST00000319380 PHKBQ93100 1093 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 KDM2BQ8NHM5 1336 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 ABCB4P21439 1286 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 ZNF75DP51815 510 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 GPBP1Q86WP2 473 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 MYOCDQ8IZQ8 938 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 EFCC1Q9HA90 598 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 ARPP21Q9UBL0 812 aaPredicted RBP19.3■□□□□ 0.68
UBE2O-201ENST00000319380 FANCAO15360 1455 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 TMEM191BP0C7N4 346 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 LMNB1P20700 586 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 HOXC9P31274 260 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 INPP1P49441 399 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 IFRD2Q12894 506 aaPredicted RBP19.3■□□□□ 0.68
UBE2O-201ENST00000319380 DPY19L2Q6NUT2 758 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 POMGNT1Q8WZA1 660 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 CCDC51Q96ER9 411 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 USP40Q9NVE5 1235 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 FAN1Q9Y2M0 1017 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 HOXB7P09629 217 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 XKR9Q5GH70 373 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 HDAC11Q96DB2 347 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 BABAM1Q9NWV8 329 aa19.3■□□□□ 0.68
UBE2O-201ENST00000319380 MRPL11Q9Y3B7 192 aaKnown RBP19.3■□□□□ 0.68
UBE2O-201ENST00000319380 TYW5A2RUC4 315 aaKnown RBP19.3■□□□□ 0.68
UBE2O-201ENST00000319380 RNF8O76064 485 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms