RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 FAXDC2Q96IV6 333 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 SPATA32Q96LK8 384 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 H0YHG0 523 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 RPS6KA5O75582 802 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 SFPQP23246 707 aaKnown RBP eCLIP10.67□□□□□ -0.7
CAPN3-201ENST00000318023 SARNPP82979 210 aaKnown RBP10.67□□□□□ -0.7
CAPN3-201ENST00000318023 ATP2B2Q01814 1243 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 NECAB1Q8N987 351 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 ZNF70Q9UC06 446 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-201ENST00000318023 DAGLAQ9Y4D2 1042 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 VEGFBP49765 207 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 INHBEP58166 350 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 DEFB115Q30KQ5 88 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 AOPEPQ8N6M6 819 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 MIEF2Q96C03 454 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 DDX19AQ9NUU7 478 aaKnown RBP10.67□□□□□ -0.7
CAPN3-201ENST00000318023 LIMCH1Q9UPQ0 1083 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 BRCA2P51587 3418 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 ZNF157P51786 506 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-201ENST00000318023 DYNLL1P63167 89 aaKnown RBP10.66□□□□□ -0.7
CAPN3-201ENST00000318023 PPP2R3AQ06190 1150 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 TRIM65Q6PJ69 517 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 MAGEB6Q8N7X4 407 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 TBC1D22AQ8WUA7 517 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 N4BP2L2Q92802 583 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-201ENST00000318023 GBA2Q9HCG7 927 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-201ENST00000318023 TMOD2Q9NZR1 351 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 SAP30BPQ9UHR5 308 aaKnown RBP10.66□□□□□ -0.7
CAPN3-201ENST00000318023 MYO3BQ8WXR4 1341 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 FRMD3A2A2Y4 597 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 BTDP43251 543 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 C15orf52Q6ZUT6 534 aaKnown RBP10.66□□□□□ -0.7
CAPN3-201ENST00000318023 JMYQ8N9B5 988 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 CLMNQ96JQ2 1002 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 KCND1Q9NSA2 647 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 FAM205AQ6ZU69 1335 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 PHLPP2Q6ZVD8 1323 aa10.66□□□□□ -0.7
CAPN3-201ENST00000318023 MAP2K7O14733 419 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 PPFIA4O75335 1185 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 CYP7A1P22680 504 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 GSDMDP57764 484 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 GOLGA8FQ08AF8 430 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 GOLGA8DPQ0D2H9 430 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 SCRN1Q12765 414 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 HSP90AB4PQ58FF6 505 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 APOBEC3HQ6NTF7 200 aaKnown RBP10.65□□□□□ -0.7
CAPN3-201ENST00000318023 CCDC84Q86UT8 332 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-201ENST00000318023 ERC1Q8IUD2 1116 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 RASEFQ8IZ41 740 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 C2orf69Q8N8R5 385 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 FAM204AQ9H8W3 233 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-201ENST00000318023 FBXO3Q9UK99 471 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 POLR2AP24928 1970 aaKnown RBP10.65□□□□□ -0.7
CAPN3-201ENST00000318023 LRRC37AA6NMS7 1700 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 TRDNQ13061 729 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 PTPN21Q16825 1174 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 NAA16Q6N069 864 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-201ENST00000318023 RBM43Q6ZSC3 357 aaKnown RBP10.65□□□□□ -0.7
CAPN3-201ENST00000318023 ADGRA1Q86SQ6 560 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 HOMEZQ8IX15 550 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 DHX40Q8IX18 779 aaKnown RBP10.65□□□□□ -0.7
CAPN3-201ENST00000318023 ZNF384Q8TF68 577 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 CD248Q9HCU0 757 aa10.65□□□□□ -0.7
CAPN3-201ENST00000318023 TTC41PQ6P2S7 1318 aa10.65□□□□□ -0.71
CAPN3-201ENST00000318023 ELF1P32519 619 aa10.65□□□□□ -0.71
CAPN3-201ENST00000318023 CEBPZQ03701 1054 aaKnown RBP10.65□□□□□ -0.71
CAPN3-201ENST00000318023 VPS53Q5VIR6 699 aa10.65□□□□□ -0.71
CAPN3-201ENST00000318023 LARP1BQ659C4 914 aaKnown RBP10.65□□□□□ -0.71
CAPN3-201ENST00000318023 CDC42EP5Q6NZY7 148 aa10.65□□□□□ -0.71
CAPN3-201ENST00000318023 MAPKAPK5Q8IW41 473 aa10.65□□□□□ -0.71
CAPN3-201ENST00000318023 CAPNS2Q96L46 248 aa10.65□□□□□ -0.71
CAPN3-201ENST00000318023 TTC14Q96N46 770 aa10.65□□□□□ -0.71
CAPN3-201ENST00000318023 WDR24Q96S15 920 aa10.65□□□□□ -0.71
CAPN3-201ENST00000318023 CCT5P48643 541 aa10.64□□□□□ -0.71
CAPN3-201ENST00000318023 SAPCD2Q86UD0 394 aa10.64□□□□□ -0.71
CAPN3-201ENST00000318023 PGBD1Q96JS3 809 aa10.64□□□□□ -0.71
CAPN3-201ENST00000318023 ZNF609O15014 1411 aa10.64□□□□□ -0.71
CAPN3-201ENST00000318023 PASKQ96RG2 1323 aa10.64□□□□□ -0.71
CAPN3-201ENST00000318023 HSPA4P34932 840 aa10.64□□□□□ -0.71
CAPN3-201ENST00000318023 SLC9C2Q5TAH2 1124 aa10.64□□□□□ -0.71
CAPN3-201ENST00000318023 ZC3H15Q8WU90 426 aaKnown RBP10.64□□□□□ -0.71
CAPN3-201ENST00000318023 LEO1Q8WVC0 666 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-201ENST00000318023 XPO4Q9C0E2 1151 aaKnown RBP10.64□□□□□ -0.71
CAPN3-201ENST00000318023 SNX14Q9Y5W7 946 aa10.64□□□□□ -0.71
CAPN3-201ENST00000318023 DICER1Q9UPY3 1922 aaKnown RBP10.64□□□□□ -0.71
CAPN3-201ENST00000318023 MPHOSPH10O00566 681 aaKnown RBP10.63□□□□□ -0.71
CAPN3-201ENST00000318023 UQCRFS1P1P0C7P4 283 aa10.63□□□□□ -0.71
CAPN3-201ENST00000318023 NF2P35240 595 aa10.63□□□□□ -0.71
CAPN3-201ENST00000318023 HSP90B2PQ58FF3 399 aa10.63□□□□□ -0.71
CAPN3-201ENST00000318023 KIRREL3Q8IZU9 778 aa10.63□□□□□ -0.71
CAPN3-201ENST00000318023 TGFBRAP1Q8WUH2 860 aa10.63□□□□□ -0.71
CAPN3-201ENST00000318023 CREBZFQ9NS37 354 aa10.63□□□□□ -0.71
CAPN3-201ENST00000318023 IFNKQ9P0W0 207 aa10.63□□□□□ -0.71
CAPN3-201ENST00000318023 CCDC151A5D8V7 595 aa10.63□□□□□ -0.71
CAPN3-201ENST00000318023 USP8P40818 1118 aa10.63□□□□□ -0.71
CAPN3-201ENST00000318023 RSRC2Q7L4I2 434 aaKnown RBP10.63□□□□□ -0.71
CAPN3-201ENST00000318023 CTCFLQ8NI51 663 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-201ENST00000318023 SH3RF3Q8TEJ3 882 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-201ENST00000318023 ZKSCAN4Q969J2 545 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms