RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 SBF1O95248 1867 aa18.15■□□□□ 0.5
CALR-201ENST00000316448 MYO1BO43795 1136 aa18.15■□□□□ 0.5
CALR-201ENST00000316448 LIG1P18858 919 aa18.15■□□□□ 0.5
CALR-201ENST00000316448 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
CALR-201ENST00000316448 EARS2Q5JPH6 523 aaKnown RBP18.15■□□□□ 0.5
CALR-201ENST00000316448 TTBK2Q6IQ55 1244 aa18.15■□□□□ 0.5
CALR-201ENST00000316448 GPKOWQ92917 476 aaPredicted RBP eCLIP18.15■□□□□ 0.51e-9■■□□□ 12
CALR-201ENST00000316448 TSPY26PQ9H489 355 aa18.15■□□□□ 0.5
CALR-201ENST00000316448 RTEL1Q9NZ71 1219 aa18.15■□□□□ 0.5
CALR-201ENST00000316448 NYAP2Q9P242 653 aa18.15■□□□□ 0.5
CALR-201ENST00000316448 HERC5Q9UII4 1024 aaKnown RBP18.15■□□□□ 0.5
CALR-201ENST00000316448 SRCAPQ6ZRS2 3230 aa18.14■□□□□ 0.5
CALR-201ENST00000316448 FAM205CA6NFA0 338 aa18.14■□□□□ 0.49
CALR-201ENST00000316448 MMP14P50281 582 aa18.14■□□□□ 0.49
CALR-201ENST00000316448 TOB1P50616 345 aaPredicted RBP18.14■□□□□ 0.49
CALR-201ENST00000316448 TMEM179Q6ZVK1 233 aa18.14■□□□□ 0.49
CALR-201ENST00000316448 TRPM4Q8TD43 1214 aa18.14■□□□□ 0.49
CALR-201ENST00000316448 KANSL2Q9H9L4 492 aa18.14■□□□□ 0.49
CALR-201ENST00000316448 GPCPD1Q9NPB8 672 aa18.14■□□□□ 0.49
CALR-201ENST00000316448 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.14■□□□□ 0.49
CALR-201ENST00000316448 MAP3K10Q02779 954 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 KIF4BQ2VIQ3 1234 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 LINC00301Q8NCQ3 95 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 SPZ1Q9BXG8 430 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 VAT1LQ9HCJ6 419 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 HACL1Q9UJ83 578 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 A0A1W2PRG0 241 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 GOLGA6L4A6NEF3 574 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 TBC1D12O60347 775 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 ZNF543Q08ER8 600 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 NOSTRINQ8IVI9 506 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 LZTS2Q9BRK4 669 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 FOXP1Q9H334 677 aaPredicted RBP18.13■□□□□ 0.49
CALR-201ENST00000316448 RIOX1Q9H6W3 641 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 GPRC5DQ9NZD1 345 aa18.13■□□□□ 0.49
CALR-201ENST00000316448 DICER1Q9UPY3 1922 aaKnown RBP18.13■□□□□ 0.49
CALR-201ENST00000316448 EPS15P42566 896 aa18.12■□□□□ 0.49
CALR-201ENST00000316448 HIRAP54198 1017 aaPredicted RBP18.12■□□□□ 0.49
CALR-201ENST00000316448 ICA1Q05084 483 aa18.12■□□□□ 0.49
CALR-201ENST00000316448 WWC2Q6AWC2 1192 aa18.12■□□□□ 0.49
CALR-201ENST00000316448 TNFRSF25Q93038 417 aa18.12■□□□□ 0.49
CALR-201ENST00000316448 FUCA2Q9BTY2 467 aa18.12■□□□□ 0.49
CALR-201ENST00000316448 DDX19AQ9NUU7 478 aaKnown RBP18.12■□□□□ 0.49
CALR-201ENST00000316448 POLR3EQ9NVU0 708 aa18.12■□□□□ 0.49
CALR-201ENST00000316448 MYH4Q9Y623 1939 aa18.12■□□□□ 0.49
CALR-201ENST00000316448 DDNO94850 711 aaPredicted RBP18.11■□□□□ 0.49
CALR-201ENST00000316448 GNL2Q13823 731 aaKnown RBP18.11■□□□□ 0.49
CALR-201ENST00000316448 SAFBQ15424 915 aaKnown RBP eCLIP18.11■□□□□ 0.49
CALR-201ENST00000316448 ANO1Q5XXA6 986 aa18.11■□□□□ 0.49
CALR-201ENST00000316448 KCTD1Q719H9 257 aa18.11■□□□□ 0.49
CALR-201ENST00000316448 GPC2Q8N158 579 aa18.11■□□□□ 0.49
CALR-201ENST00000316448 PIGSQ96S52 555 aa18.11■□□□□ 0.49
CALR-201ENST00000316448 SMARCA1P28370 1054 aa18.11■□□□□ 0.49
CALR-201ENST00000316448 PTPAQ15257 358 aa18.11■□□□□ 0.49
CALR-201ENST00000316448 SF3A1Q15459 793 aaKnown RBP18.11■□□□□ 0.49
CALR-201ENST00000316448 ASPRV1Q53RT3 343 aa18.11■□□□□ 0.49
CALR-201ENST00000316448 DACT1Q9NYF0 836 aa18.11■□□□□ 0.49
CALR-201ENST00000316448 RNF181Q9P0P0 153 aa18.11■□□□□ 0.49
CALR-201ENST00000316448 PCDHA7Q9UN72 937 aa18.11■□□□□ 0.49
CALR-201ENST00000316448 H7C1D1 291 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 STXBP3O00186 592 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 YEATS4O95619 227 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 SLC16A2P36021 539 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 BICD2Q8TD16 824 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 ACER1Q8TDN7 264 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 NUP62CLQ9H1M0 184 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 CABP5Q9NP86 173 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 PHF20L1A8MW92 1017 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 WNT7AO00755 349 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 XBP1P17861 261 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 KRT2P35908 639 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 NLRP5P59047 1200 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 KIAA1755Q5JYT7 1200 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 SLFN13Q68D06 897 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 RBM43Q6ZSC3 357 aaKnown RBP18.1■□□□□ 0.49
CALR-201ENST00000316448 HOMER1Q86YM7 354 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 JMJD4Q9H9V9 463 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 ZBTB21Q9ULJ3 1066 aa18.1■□□□□ 0.49
CALR-201ENST00000316448 F5H6K3 240 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 NR1I2O75469 434 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 CAP2P40123 477 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 ECE1P42892 770 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 TNNI2P48788 182 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 KLRC3Q07444 240 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 PRAMEF18Q5VWM3 479 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 CCDC84Q86UT8 332 aaPredicted RBP18.09■□□□□ 0.49
CALR-201ENST00000316448 PPP1R9BQ96SB3 815 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 NUP88Q99567 741 aaPredicted RBP18.09■□□□□ 0.49
CALR-201ENST00000316448 DEFB129Q9H1M3 183 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 GOLPH3LQ9H4A5 285 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 CLSTN2Q9H4D0 955 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 BARHL2Q9NY43 387 aa18.09■□□□□ 0.49
CALR-201ENST00000316448 CCDC173Q0VFZ6 552 aa18.08■□□□□ 0.49
CALR-201ENST00000316448 SLC39A14Q15043 492 aa18.08■□□□□ 0.49
CALR-201ENST00000316448 STK38Q15208 465 aa18.08■□□□□ 0.49
CALR-201ENST00000316448 NBPF12Q5TAG4 269 aaPredicted RBP18.08■□□□□ 0.49
CALR-201ENST00000316448 ANGEL2Q5VTE6 544 aaKnown RBP18.08■□□□□ 0.49
CALR-201ENST00000316448 C9orf131Q5VYM1 1079 aa18.08■□□□□ 0.49
CALR-201ENST00000316448 HEATR3Q7Z4Q2 680 aa18.08■□□□□ 0.49
CALR-201ENST00000316448 ADGRF4Q8IZF3 695 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms