RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 SPATC1LQ9H0A9 340 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 RNF208Q9H0X6 261 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 HOXC10Q9NYD6 342 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 FLRT1Q9NZU1 646 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 PPP1R9AQ9ULJ8 1098 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 SYNPO2Q9UMS6 1093 aa17.38■□□□□ 0.37
PPP1CA-201ENST00000312989 ORC4O43929 436 aa17.37■□□□□ 0.37
PPP1CA-201ENST00000312989 HOXC6P09630 235 aa17.37■□□□□ 0.37
PPP1CA-201ENST00000312989 TFAP4Q01664 338 aa17.37■□□□□ 0.37
PPP1CA-201ENST00000312989 PDE4BQ07343 736 aa17.37■□□□□ 0.37
PPP1CA-201ENST00000312989 ZNF444Q8N0Y2 327 aaPredicted RBP17.37■□□□□ 0.37
PPP1CA-201ENST00000312989 U2AF1L4Q8WU68 220 aaKnown RBP17.37■□□□□ 0.37
PPP1CA-201ENST00000312989 CRISPLD2Q9H0B8 497 aa17.37■□□□□ 0.37
PPP1CA-201ENST00000312989 CLIP2Q9UDT6 1046 aa17.37■□□□□ 0.37
PPP1CA-201ENST00000312989 ZNF214Q9UL59 606 aaPredicted RBP17.37■□□□□ 0.37
PPP1CA-201ENST00000312989 ZNF236Q9UL36 1845 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 NMT2O60551 498 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 MAP2K5Q13163 448 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 TTC22Q5TAA0 569 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 TBC1D10CQ8IV04 446 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 LRRC47Q8N1G4 583 aaKnown RBP17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 MB21D1Q8N884 522 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 GMCL1P1Q8NEA9 526 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 SHCBP1Q8NEM2 672 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 APBA2Q99767 749 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 ZNF287Q9HBT7 754 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 GOPCQ9HD26 462 aa17.36■□□□□ 0.37
PPP1CA-201ENST00000312989 SLC15A5A6NIM6 579 aa17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 VWA5AO00534 786 aa17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 SGPL1O95470 568 aa17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 TTLL1O95922 423 aa17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 ERCC3P19447 782 aa17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 RGS2P41220 211 aa17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 MNX1P50219 401 aaPredicted RBP17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 CCNA1P78396 465 aa17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 RASGRP2Q7LDG7 609 aa17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 NPLOC4Q8TAT6 608 aa17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 BIN2Q9UBW5 565 aaPredicted RBP17.35■□□□□ 0.37
PPP1CA-201ENST00000312989 TSPY3P0CV98 308 aa17.34■□□□□ 0.37
PPP1CA-201ENST00000312989 TSPY8P0CW00 308 aa17.34■□□□□ 0.37
PPP1CA-201ENST00000312989 CWC27Q6UX04 472 aaKnown RBP17.34■□□□□ 0.37
PPP1CA-201ENST00000312989 COBLO75128 1261 aa17.33■□□□□ 0.36
PPP1CA-201ENST00000312989 SLC3A2P08195 630 aaKnown RBP17.33■□□□□ 0.36
PPP1CA-201ENST00000312989 CACNB2Q08289 660 aaPredicted RBP17.33■□□□□ 0.36
PPP1CA-201ENST00000312989 DEFB118Q96PH6 123 aa17.33■□□□□ 0.36
PPP1CA-201ENST00000312989 RPTORQ8N122 1335 aa17.33■□□□□ 0.36
PPP1CA-201ENST00000312989 PRKAR2AP13861 404 aaKnown RBP17.32■□□□□ 0.36
PPP1CA-201ENST00000312989 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
PPP1CA-201ENST00000312989 ADORA2AP29274 412 aa17.32■□□□□ 0.36
PPP1CA-201ENST00000312989 HAND2P61296 217 aa17.32■□□□□ 0.36
PPP1CA-201ENST00000312989 PRPF38BQ5VTL8 546 aaKnown RBP17.32■□□□□ 0.36
PPP1CA-201ENST00000312989 RIOX2Q8IUF8 465 aa17.32■□□□□ 0.36
PPP1CA-201ENST00000312989 STAG1Q8WVM7 1258 aa17.32■□□□□ 0.36
PPP1CA-201ENST00000312989 PDE4DIPQ5VU43 2346 aa17.32■□□□□ 0.36
PPP1CA-201ENST00000312989 RCSD1Q6JBY9 416 aa17.31■□□□□ 0.36
PPP1CA-201ENST00000312989 GMCL1Q96IK5 515 aa17.31■□□□□ 0.36
PPP1CA-201ENST00000312989 SLF1Q9BQI6 1058 aa17.31■□□□□ 0.36
PPP1CA-201ENST00000312989 RIPK3Q9Y572 518 aa17.31■□□□□ 0.36
PPP1CA-201ENST00000312989 NEDD4P46934 1319 aa17.31■□□□□ 0.36
PPP1CA-201ENST00000312989 TSPY2A6NKD2 308 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 ATP2A1O14983 1001 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 CCND3P30281 292 aaPredicted RBP17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 WDR78Q5VTH9 848 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 SLFN13Q68D06 897 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 LHX8Q68G74 356 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 TRMT44Q8IYL2 757 aaKnown RBP17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 ABRAQ8N0Z2 381 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 TRPV1Q8NER1 839 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 DSCC1Q9BVC3 393 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 MROH8Q9H579 483 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 DIAPH3Q9NSV4 1193 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 TCP11L1Q9NUJ3 509 aa17.3■□□□□ 0.36
PPP1CA-201ENST00000312989 HIP1O00291 1037 aa17.29■□□□□ 0.36
PPP1CA-201ENST00000312989 STRNO43815 780 aa17.29■□□□□ 0.36
PPP1CA-201ENST00000312989 AKNAD1Q5T1N1 836 aa17.29■□□□□ 0.36
PPP1CA-201ENST00000312989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.29■□□□□ 0.36
PPP1CA-201ENST00000312989 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
PPP1CA-201ENST00000312989 DIS3LQ8TF46 1054 aaKnown RBP17.29■□□□□ 0.36
PPP1CA-201ENST00000312989 SLC38A10Q9HBR0 1119 aa17.29■□□□□ 0.36
PPP1CA-201ENST00000312989 HMX1Q9NP08 348 aaPredicted RBP17.29■□□□□ 0.36
PPP1CA-201ENST00000312989 OGDHLQ9ULD0 1010 aa17.29■□□□□ 0.36
PPP1CA-201ENST00000312989 RAD21O60216 631 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 RANBP6O60518 1105 aaKnown RBP17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 SLC25A27O95847 323 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 BMP3P12645 472 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 STAT3P40763 770 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 PLS1Q14651 629 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 OLFML2BQ68BL8 750 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 SKAP1Q86WV1 359 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 NCAPG2Q86XI2 1143 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 PRPF38AQ8NAV1 312 aaKnown RBP17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 STX8Q9UNK0 236 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 IVNS1ABPQ9Y6Y0 642 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 ZNF536O15090 1300 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 COL11A1P12107 1806 aaPredicted RBP17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 FARP2O94887 1054 aaPredicted RBP17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 PCP11498 1178 aaKnown RBP17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 CYBAP13498 195 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms