RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 MIGA1Q8NAN2 632 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 CACTINQ8WUQ7 758 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 SPDL1Q96EA4 605 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 ORC3Q9UBD5 711 aaPredicted RBP10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 CFAP45Q9UL16 551 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 ZRANB2O95218 330 aaKnown RBP eCLIP10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 CPP00450 1065 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 CCDC192P0DO97 292 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 TPP2P29144 1249 aaPredicted RBP10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 NDUFA8P51970 172 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 IQCA1Q86XH1 822 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 TNMDQ9H2S6 317 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 MKRN1Q9UHC7 482 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 FAM237AA0A1B0GTK4 181 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 H3BQF6 201 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 RPS6KA4O75676 772 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 TOB1P50616 345 aaPredicted RBP10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 GRIK3Q13003 919 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 SDR42E1Q8WUS8 393 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 AIDAQ96BJ3 306 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 TMEM87BQ96K49 555 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 LMCD1Q9NZU5 365 aa10.75□□□□□ -0.69
RBFOX1-201ENST00000311745 COL11A2P13942 1736 aaPredicted RBP10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 A0A1W2PQ27 194 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 A0A1W2PQ64 194 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 A0A1W2PQD8 194 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 IGHMBP2P38935 993 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 DYNLL1P63167 89 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 UBE4AQ14139 1066 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 ARID5BQ14865 1188 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 CRYMQ14894 314 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 CCDC181Q5TID7 509 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 ADALQ6DHV7 355 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 KIAA0825Q8IV33 1275 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 NUP133Q8WUM0 1156 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 C8orf37Q96NL8 207 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 HSD3B7Q9H2F3 369 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 LRRC4BQ9NT99 713 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 HPSEQ9Y251 543 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 CAPN7Q9Y6W3 813 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 PDS5AQ29RF7 1337 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 STK36Q9NRP7 1315 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 MAP3K12Q12852 859 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 PDCD2Q16342 344 aaPredicted RBP10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 HOMER1Q86YM7 354 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 DNAJC25Q9H1X3 360 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 MCM8Q9UJA3 840 aa10.74□□□□□ -0.69
RBFOX1-201ENST00000311745 CYP2D7A0A087X1C5 515 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 ONECUT3O60422 494 aaPredicted RBP10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 TBC1D8O95759 1140 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 POLR3DP05423 398 aaPredicted RBP10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 PYGBP11216 843 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 FAM160A1Q05DH4 1040 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 CCDC144CPQ8IYA2 1237 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 C8orf76Q96K31 380 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 ARFGAP3Q9NP61 516 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 CLIP2Q9UDT6 1046 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 DNAI1Q9UI46 699 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 GOLGB1Q14789 3259 aaKnown RBP10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 CDKL5O76039 1030 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 KIF4AO95239 1232 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 FMNL1O95466 1100 aaPredicted RBP10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 GBP2P32456 591 aaPredicted RBP10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 METAP2P50579 478 aaKnown RBP eCLIP10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 KRT40Q6A162 431 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 GET4Q7L5D6 327 aaPredicted RBP10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 CCDC24Q8N4L8 307 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 NSUN4Q96CB9 384 aaKnown RBP10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 SLC4A4Q9Y6R1 1079 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 ADAMTS3O15072 1205 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 YEATS4O95619 227 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 PPARAQ07869 468 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 NPY5RQ15761 445 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 THEMIS2Q5TEJ8 643 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 CCDC102AQ96A19 550 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 ZKSCAN3Q9BRR0 538 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 ACBD3Q9H3P7 528 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 PDE11AQ9HCR9 933 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 PSD3Q9NYI0 1048 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 FAN1Q9Y2M0 1017 aa10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.73□□□□□ -0.69
RBFOX1-201ENST00000311745 A0A1B0GVL5 298 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 PECAM1P16284 738 aaPredicted RBP10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 NAT1P18440 290 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 CA8P35219 290 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 GRIK5Q16478 980 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 PKN1Q16512 942 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 SHC4Q6S5L8 630 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 ARMC9Q7Z3E5 817 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 RALYLQ86SE5 291 aaKnown RBP10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 SAAL1Q96ER3 474 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 CABS1Q96KC9 395 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 EIF3JO75822 258 aaKnown RBP10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 INPP5BP32019 993 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 DBN1Q16643 649 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 CCDC144BQ3MJ40 725 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 BRAPQ7Z569 592 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms