RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 BMP3P12645 472 aa15.09■□□□□ 0.01
APTX-201ENST00000309615 MAP2K1Q02750 393 aaPredicted RBP15.09■□□□□ 0.01
APTX-201ENST00000309615 USP17L24Q0WX57 530 aa15.09■□□□□ 0.01
APTX-201ENST00000309615 PABPC4Q13310 644 aaKnown RBP eCLIP15.09■□□□□ 0.01
APTX-201ENST00000309615 KCTD1Q719H9 257 aa15.09■□□□□ 0.01
APTX-201ENST00000309615 TMTC2Q8N394 836 aa15.09■□□□□ 0.01
APTX-201ENST00000309615 JMYQ8N9B5 988 aa15.09■□□□□ 0.01
APTX-201ENST00000309615 MYL10Q9BUA6 226 aa15.09■□□□□ 0.01
APTX-201ENST00000309615 ZCCHC17Q9NP64 241 aaKnown RBP15.09■□□□□ 0.01
APTX-201ENST00000309615 PDRG1Q9NUG6 133 aa15.09■□□□□ 0.01
APTX-201ENST00000309615 CCDC69A6NI79 296 aa15.08■□□□□ 0.01
APTX-201ENST00000309615 SNHG28P0DPA3 235 aa15.08■□□□□ 0.01
APTX-201ENST00000309615 IRX3P78415 501 aaPredicted RBP15.08■□□□□ 0.01
APTX-201ENST00000309615 TROAPQ12815 778 aa15.08■□□□□ 0.01
APTX-201ENST00000309615 CRHR2Q13324 411 aa15.08■□□□□ 0.01
APTX-201ENST00000309615 TAF1CQ15572 869 aaPredicted RBP15.08■□□□□ 0.01
APTX-201ENST00000309615 CCDC96Q2M329 555 aa15.08■□□□□ 0.01
APTX-201ENST00000309615 SGMS1Q86VZ5 419 aa15.08■□□□□ 0.01
APTX-201ENST00000309615 ZNF654Q8IZM8 581 aa15.08■□□□□ 0.01
APTX-201ENST00000309615 BRF1Q92994 677 aa15.08■□□□□ 0.01
APTX-201ENST00000309615 FBXO28Q9NVF7 368 aa15.08■□□□□ 0.01
APTX-201ENST00000309615 BRPF3Q9ULD4 1205 aa15.08■□□□□ 0.01
APTX-201ENST00000309615 ISY1Q9ULR0 285 aaKnown RBP15.08■□□□□ 0.01
APTX-201ENST00000309615 FRMPD2Q68DX3 1309 aaPredicted RBP15.08■□□□□ 0
APTX-201ENST00000309615 FLOT1O75955 427 aa15.08■□□□□ 0
APTX-201ENST00000309615 ALDH1A1P00352 501 aa15.08■□□□□ 0
APTX-201ENST00000309615 OSBPP22059 807 aa15.08■□□□□ 0
APTX-201ENST00000309615 NEK4P51957 841 aa15.08■□□□□ 0
APTX-201ENST00000309615 TOB2Q14106 344 aaPredicted RBP15.08■□□□□ 0
APTX-201ENST00000309615 CATIPQ7Z7H3 387 aa15.08■□□□□ 0
APTX-201ENST00000309615 FBXL16Q8N461 479 aa15.08■□□□□ 0
APTX-201ENST00000309615 DCAF4Q8WV16 495 aa15.08■□□□□ 0
APTX-201ENST00000309615 P2RX7Q99572 595 aaKnown RBP15.08■□□□□ 0
APTX-201ENST00000309615 AGXT2Q9BYV1 514 aa15.08■□□□□ 0
APTX-201ENST00000309615 R3HDMLQ9H3Y0 253 aa15.08■□□□□ 0
APTX-201ENST00000309615 WBP1LQ9NX94 342 aa15.08■□□□□ 0
APTX-201ENST00000309615 TMEM232C9JQI7 657 aa15.07■□□□□ 0
APTX-201ENST00000309615 CA12O43570 354 aa15.07■□□□□ 0
APTX-201ENST00000309615 GOLGA8HP0CJ92 632 aa15.07■□□□□ 0
APTX-201ENST00000309615 ZNF543Q08ER8 600 aa15.07■□□□□ 0
APTX-201ENST00000309615 APOBRQ0VD83 1088 aa15.07■□□□□ 0
APTX-201ENST00000309615 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
APTX-201ENST00000309615 RAB11FIP4Q86YS3 637 aa15.07■□□□□ 0
APTX-201ENST00000309615 NUP133Q8WUM0 1156 aa15.07■□□□□ 0
APTX-201ENST00000309615 PARK7Q99497 189 aaKnown RBP15.07■□□□□ 0
APTX-201ENST00000309615 LARP6Q9BRS8 491 aaKnown RBP15.07■□□□□ 0
APTX-201ENST00000309615 GPCPD1Q9NPB8 672 aa15.07■□□□□ 0
APTX-201ENST00000309615 PNMA3Q9UL41 463 aa15.07■□□□□ 0
APTX-201ENST00000309615 SLC12A7Q9Y666 1083 aa15.07■□□□□ 0
APTX-201ENST00000309615 TBC1D8O95759 1140 aa15.06■□□□□ 0
APTX-201ENST00000309615 RXRAP19793 462 aa15.06■□□□□ 0
APTX-201ENST00000309615 COG2Q14746 738 aa15.06■□□□□ 0
APTX-201ENST00000309615 TTBK2Q6IQ55 1244 aa15.06■□□□□ 0
APTX-201ENST00000309615 APOA5Q6Q788 366 aa15.06■□□□□ 0
APTX-201ENST00000309615 POTEEQ6S8J3 1075 aa15.06■□□□□ 0
APTX-201ENST00000309615 SMCR8Q8TEV9 937 aaPredicted RBP15.06■□□□□ 0
APTX-201ENST00000309615 BEGAINQ9BUH8 593 aa15.06■□□□□ 0
APTX-201ENST00000309615 KLF18A0A0U1RQI7 1052 aa15.06■□□□□ 0
APTX-201ENST00000309615 SPDYE16A6NNV3 312 aaPredicted RBP15.06■□□□□ 0
APTX-201ENST00000309615 DDAH1O94760 285 aa15.06■□□□□ 0
APTX-201ENST00000309615 PARP1P09874 1014 aaKnown RBP15.06■□□□□ 0
APTX-201ENST00000309615 HERVK_113P62684 666 aa15.06■□□□□ 0
APTX-201ENST00000309615 MICU3Q86XE3 530 aa15.06■□□□□ 0
APTX-201ENST00000309615 STAG2Q8N3U4 1231 aa15.06■□□□□ 0
APTX-201ENST00000309615 SLF1Q9BQI6 1058 aa15.06■□□□□ 0
APTX-201ENST00000309615 ZFYVE28Q9HCC9 887 aa15.06■□□□□ 0
APTX-201ENST00000309615 PEX10O60683 326 aa15.05■□□□□ -0
APTX-201ENST00000309615 SLC16A2P36021 539 aa15.05■□□□□ -0
APTX-201ENST00000309615 STAT2P52630 851 aa15.05■□□□□ -0
APTX-201ENST00000309615 IKQ13123 557 aaPredicted RBP15.05■□□□□ -0
APTX-201ENST00000309615 CCDC144CPQ8IYA2 1237 aa15.05■□□□□ -0
APTX-201ENST00000309615 KIFC2Q96AC6 838 aa15.05■□□□□ -0
APTX-201ENST00000309615 CPVLQ9H3G5 476 aa15.05■□□□□ -0
APTX-201ENST00000309615 SAGE1Q9NXZ1 904 aa15.05■□□□□ -0
APTX-201ENST00000309615 HOXC10Q9NYD6 342 aa15.05■□□□□ -0
APTX-201ENST00000309615 MAD2L2Q9UI95 211 aa15.05■□□□□ -0
APTX-201ENST00000309615 TSKSQ9UJT2 592 aa15.05■□□□□ -0
APTX-201ENST00000309615 FEM1BQ9UK73 627 aa15.05■□□□□ -0
APTX-201ENST00000309615 PPP1R9AQ9ULJ8 1098 aa15.05■□□□□ -0
APTX-201ENST00000309615 NAP1L2Q9ULW6 460 aaPredicted RBP15.05■□□□□ -0
APTX-201ENST00000309615 ADGRA2Q96PE1 1338 aa15.04■□□□□ -0
APTX-201ENST00000309615 TLR2O60603 784 aa15.04■□□□□ -0
APTX-201ENST00000309615 DSG3P32926 999 aa15.04■□□□□ -0
APTX-201ENST00000309615 AK2P54819 239 aa15.04■□□□□ -0
APTX-201ENST00000309615 GRM4Q14833 912 aa15.04■□□□□ -0
APTX-201ENST00000309615 ASPRV1Q53RT3 343 aa15.04■□□□□ -0
APTX-201ENST00000309615 GPATCH4Q5T3I0 446 aaKnown RBP15.04■□□□□ -0
APTX-201ENST00000309615 SYNE3Q6ZMZ3 975 aa15.04■□□□□ -0
APTX-201ENST00000309615 ATG4CQ96DT6 458 aa15.04■□□□□ -0
APTX-201ENST00000309615 ALDH8A1Q9H2A2 487 aaPredicted RBP15.04■□□□□ -0
APTX-201ENST00000309615 CPA4Q9UI42 421 aa15.04■□□□□ -0
APTX-201ENST00000309615 PALM3A6NDB9 673 aaPredicted RBP15.03■□□□□ -0
APTX-201ENST00000309615 ZBTB43O43298 467 aa15.03■□□□□ -0
APTX-201ENST00000309615 EVCP57679 992 aa15.03■□□□□ -0
APTX-201ENST00000309615 RABEP1Q15276 862 aa15.03■□□□□ -0
APTX-201ENST00000309615 BTNL9Q6UXG8 535 aa15.03■□□□□ -0
APTX-201ENST00000309615 PRPF38AQ8NAV1 312 aaKnown RBP15.03■□□□□ -0
APTX-201ENST00000309615 CHURC1Q8WUH1 139 aa15.03■□□□□ -0
APTX-201ENST00000309615 CFHR5Q9BXR6 569 aa15.03■□□□□ -0
APTX-201ENST00000309615 TXNRD2Q9NNW7 524 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms